RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 CHMP4CQ96CF2 233 aa10.02□□□□□ -0.81
HNRNPU-222ENST00000639880 TMX3Q96JJ7 454 aa10.02□□□□□ -0.81
HNRNPU-222ENST00000639880 YTHDC2Q9H6S0 1430 aaKnown RBP10.02□□□□□ -0.81
HNRNPU-222ENST00000639880 KDM5DQ9BY66 1539 aa10.02□□□□□ -0.81
HNRNPU-222ENST00000639880 ZGPATQ8N5A5 531 aaKnown RBP10.02□□□□□ -0.81
HNRNPU-222ENST00000639880 CCDC34Q96HJ3 373 aa10.02□□□□□ -0.81
HNRNPU-222ENST00000639880 TPM2P07951 284 aa10.02□□□□□ -0.81
HNRNPU-222ENST00000639880 NFXL1Q6ZNB6 911 aa10.02□□□□□ -0.81
HNRNPU-222ENST00000639880 ERVK-7P63135 1459 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 RAB11FIP3O75154 756 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 TRIM29Q14134 588 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 DDX11Q96FC9 970 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 CCDC192P0DO97 292 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 CAMK4Q16566 473 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 G2E3Q7L622 706 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 TNMDQ9H2S6 317 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 ABCC1P33527 1531 aa10.01□□□□□ -0.81
HNRNPU-222ENST00000639880 FAM177BA6PVY3 158 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 KINO60870 393 aaKnown RBP10□□□□□ -0.81
HNRNPU-222ENST00000639880 NPATQ14207 1427 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 RAB3GAP1Q15042 981 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 CCDC85AQ96PX6 553 aaPredicted RBP10□□□□□ -0.81
HNRNPU-222ENST00000639880 PHF8Q9UPP1 1060 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 LRRIQ1Q96JM4 1722 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 IL13P35225 146 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 ZSCAN23Q3MJ62 389 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 ANKLE2Q86XL3 938 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 CCAR2Q8N163 923 aaKnown RBP10□□□□□ -0.81
HNRNPU-222ENST00000639880 RBM25P49756 843 aaKnown RBP10□□□□□ -0.81
HNRNPU-222ENST00000639880 AKAP17AQ02040 695 aaKnown RBP10□□□□□ -0.81
HNRNPU-222ENST00000639880 HOMER1Q86YM7 354 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 RIMS2Q9UQ26 1411 aa10□□□□□ -0.81
HNRNPU-222ENST00000639880 PES1O00541 588 aaKnown RBP9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 CABP4P57796 275 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 SPATA32Q96LK8 384 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 LIMCH1Q9UPQ0 1083 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 FKBP4Q02790 459 aaKnown RBP eCLIP9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 ANKRD1Q15327 319 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 RHPN1Q8TCX5 695 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 DBF4Q9UBU7 674 aaPredicted RBP9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 UQCRHLA0A096LP55 91 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 UQCRHP07919 91 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 ZSCAN31Q96LW9 406 aaPredicted RBP9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 ESYT1Q9BSJ8 1104 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 USP25Q9UHP3 1055 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 JARID2Q92833 1246 aaPredicted RBP9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 STRN4Q9NRL3 753 aa9.99□□□□□ -0.81
HNRNPU-222ENST00000639880 ATP2B1P20020 1258 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 KCNH5Q8NCM2 988 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 USP26Q9BXU7 913 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 CHPF2Q9P2E5 772 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 MAP3K2Q9Y2U5 619 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 CDC42BPAQ5VT25 1732 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 PRDM15P57071 1507 aaPredicted RBP9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 KDM5AP29375 1690 aaKnown RBP9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 ME1P48163 572 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 EYA1Q99502 592 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 NUP62CLQ9H1M0 184 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 MYO5CQ9NQX4 1742 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 TPD52L1Q16890 204 aaPredicted RBP9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 TCEANC2Q96MN5 208 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 MYD88Q99836 296 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 ECHDC1Q9NTX5 307 aa9.98□□□□□ -0.81
HNRNPU-222ENST00000639880 PTCD1O75127 700 aaKnown RBP9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 MAP3K19Q56UN5 1328 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 ATP8B2P98198 1209 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 SBNO2Q9Y2G9 1366 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 UHRF1BP1LA0JNW5 1464 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 ZFYVE9O95405 1425 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 STX6O43752 255 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 PPFIA3O75145 1194 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 PRIM1P49642 420 aaKnown RBP9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 MSH6P52701 1360 aa9.97□□□□□ -0.81
HNRNPU-222ENST00000639880 STK38Q15208 465 aa9.96□□□□□ -0.81
HNRNPU-222ENST00000639880 STK11IPQ8N1F8 1099 aa9.96□□□□□ -0.81
HNRNPU-222ENST00000639880 PLEKHF1Q96S99 279 aa9.96□□□□□ -0.81
HNRNPU-222ENST00000639880 RRAGDQ9NQL2 400 aaPredicted RBP9.96□□□□□ -0.81
HNRNPU-222ENST00000639880 CLCN1P35523 988 aa9.96□□□□□ -0.81
HNRNPU-222ENST00000639880 TOM1L2Q6ZVM7 507 aa9.96□□□□□ -0.81
HNRNPU-222ENST00000639880 PHAXQ9H814 394 aaKnown RBP9.96□□□□□ -0.81
HNRNPU-222ENST00000639880 PIK3R4Q99570 1358 aa9.96□□□□□ -0.82
HNRNPU-222ENST00000639880 CCDC183Q5T5S1 534 aa9.96□□□□□ -0.82
HNRNPU-222ENST00000639880 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
HNRNPU-222ENST00000639880 CKAP2LQ8IYA6 745 aa9.96□□□□□ -0.82
HNRNPU-222ENST00000639880 NECAB1Q8N987 351 aa9.96□□□□□ -0.82
HNRNPU-222ENST00000639880 GJB2P29033 226 aa9.96□□□□□ -0.82
HNRNPU-222ENST00000639880 HMGN5P82970 282 aaKnown RBP9.96□□□□□ -0.82
HNRNPU-222ENST00000639880 NAT10Q9H0A0 1025 aaKnown RBP9.96□□□□□ -0.82
HNRNPU-222ENST00000639880 TNRQ92752 1358 aa9.95□□□□□ -0.82
HNRNPU-222ENST00000639880 SMC2O95347 1197 aa9.95□□□□□ -0.82
HNRNPU-222ENST00000639880 CCDC158Q5M9N0 1113 aa9.95□□□□□ -0.82
HNRNPU-222ENST00000639880 FILIP1Q7Z7B0 1213 aa9.95□□□□□ -0.82
HNRNPU-222ENST00000639880 DTNBO60941 627 aa9.95□□□□□ -0.82
HNRNPU-222ENST00000639880 HCLS1P14317 486 aaPredicted RBP9.95□□□□□ -0.82
HNRNPU-222ENST00000639880 MAP3K11Q16584 847 aa9.95□□□□□ -0.82
HNRNPU-222ENST00000639880 TTC39AQ5SRH9 613 aa9.95□□□□□ -0.82
HNRNPU-222ENST00000639880 PA2G4Q9UQ80 394 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms