RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 GNL3LQ9NVN8 582 aaKnown RBP17.49■□□□□ 0.39
UBE3A-227ENST00000638011 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
UBE3A-227ENST00000638011 GOPCQ9HD26 462 aa17.49■□□□□ 0.39
UBE3A-227ENST00000638011 AK9Q5TCS8 1911 aa17.49■□□□□ 0.39
UBE3A-227ENST00000638011 RAB34Q9BZG1 259 aa17.49■□□□□ 0.39
UBE3A-227ENST00000638011 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
UBE3A-227ENST00000638011 A0A1B0GUL7 405 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 GNAI2P04899 355 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 STX1AQ16623 288 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 SMAP1Q8IYB5 467 aaPredicted RBP17.48■□□□□ 0.39
UBE3A-227ENST00000638011 TSG101Q99816 390 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 CETN1Q12798 172 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 SEPT14Q6ZU15 432 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 OTUD6BQ8N6M0 293 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 DHX57Q6P158 1386 aaKnown RBP17.48■□□□□ 0.39
UBE3A-227ENST00000638011 APAF1O14727 1248 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 PRPHP41219 470 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 C16orf45Q96MC5 204 aaPredicted RBP17.48■□□□□ 0.39
UBE3A-227ENST00000638011 CCDC172P0C7W6 258 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 CCT4P50991 539 aaKnown RBP17.48■□□□□ 0.39
UBE3A-227ENST00000638011 HLTFQ14527 1009 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■□□ 14.6
UBE3A-227ENST00000638011 CCDC160A6NGH7 325 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
UBE3A-227ENST00000638011 FOSBP53539 338 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 ARFGAP2Q8N6H7 521 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 HOMER2Q9NSB8 354 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 CCDC30Q5VVM6 783 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
UBE3A-227ENST00000638011 RASAL2Q9UJF2 1139 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 RAI14Q9P0K7 980 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 ERCC6Q03468 1493 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■■□□ 17.3
UBE3A-227ENST00000638011 BLOC1S2Q6QNY1 142 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 CACNA2D4Q7Z3S7 1137 aa17.47■□□□□ 0.39
UBE3A-227ENST00000638011 DDX19AQ9NUU7 478 aaKnown RBP17.47■□□□□ 0.39
UBE3A-227ENST00000638011 CCDC69A6NI79 296 aa17.46■□□□□ 0.39
UBE3A-227ENST00000638011 CCDC178Q5BJE1 867 aa17.46■□□□□ 0.39
UBE3A-227ENST00000638011 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
UBE3A-227ENST00000638011 MPHOSPH10O00566 681 aaKnown RBP17.46■□□□□ 0.39
UBE3A-227ENST00000638011 KANK3Q6NY19 840 aa17.46■□□□□ 0.39
UBE3A-227ENST00000638011 VCX3BQ9H321 246 aa17.46■□□□□ 0.39
UBE3A-227ENST00000638011 CCDC196A0A1B0GTZ2 297 aa17.45■□□□□ 0.38
UBE3A-227ENST00000638011 LACTBP83111 547 aaPredicted RBP17.45■□□□□ 0.38
UBE3A-227ENST00000638011 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
UBE3A-227ENST00000638011 FMNL3Q8IVF7 1028 aa17.45■□□□□ 0.38
UBE3A-227ENST00000638011 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
UBE3A-227ENST00000638011 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
UBE3A-227ENST00000638011 CACNA2D3Q8IZS8 1091 aa17.45■□□□□ 0.38
UBE3A-227ENST00000638011 EFCAB2Q5VUJ9 269 aa17.45■□□□□ 0.38
UBE3A-227ENST00000638011 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
UBE3A-227ENST00000638011 JAKMIP2Q96AA8 810 aa17.45■□□□□ 0.38
UBE3A-227ENST00000638011 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
UBE3A-227ENST00000638011 ATP11AP98196 1134 aa17.45■□□□□ 0.38
UBE3A-227ENST00000638011 NUP88Q99567 741 aaPredicted RBP17.45■□□□□ 0.38
UBE3A-227ENST00000638011 TTC12Q9H892 705 aaPredicted RBP17.45■□□□□ 0.38
UBE3A-227ENST00000638011 CCDC97Q96F63 343 aaPredicted RBP17.45■□□□□ 0.38
UBE3A-227ENST00000638011 LMNTD2Q8IXW0 634 aa17.44■□□□□ 0.38
UBE3A-227ENST00000638011 IQCGQ9H095 443 aaKnown RBP17.44■□□□□ 0.38
UBE3A-227ENST00000638011 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
UBE3A-227ENST00000638011 PPP1R14CQ8TAE6 165 aa17.44■□□□□ 0.38
UBE3A-227ENST00000638011 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
UBE3A-227ENST00000638011 LRRC45Q96CN5 670 aa17.43■□□□□ 0.38
UBE3A-227ENST00000638011 CEBPZQ03701 1054 aaKnown RBP17.43■□□□□ 0.38
UBE3A-227ENST00000638011 IKQ13123 557 aaPredicted RBP17.43■□□□□ 0.38
UBE3A-227ENST00000638011 C10orf67Q8IYJ2 551 aa17.43■□□□□ 0.38
UBE3A-227ENST00000638011 CTAGE1Q96RT6 745 aa17.43■□□□□ 0.38
UBE3A-227ENST00000638011 ZNF287Q9HBT7 754 aa17.43■□□□□ 0.38
UBE3A-227ENST00000638011 CAPN2P17655 700 aa17.43■□□□□ 0.38
UBE3A-227ENST00000638011 CEP57Q86XR8 500 aa17.43■□□□□ 0.38
UBE3A-227ENST00000638011 A0A1W2PRG0 241 aa17.43■□□□□ 0.38
UBE3A-227ENST00000638011 STMN1P16949 149 aa17.43■□□□□ 0.38
UBE3A-227ENST00000638011 MAATS1Q7Z4T9 603 aa17.42■□□□□ 0.38
UBE3A-227ENST00000638011 CCDC77Q9BR77 488 aa17.42■□□□□ 0.38
UBE3A-227ENST00000638011 HYPKQ9NX55 129 aa17.42■□□□□ 0.38
UBE3A-227ENST00000638011 CTAGE9A4FU28 777 aa17.42■□□□□ 0.38
UBE3A-227ENST00000638011 CCDC38Q502W7 563 aa17.42■□□□□ 0.38
UBE3A-227ENST00000638011 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.42■□□□□ 0.38
UBE3A-227ENST00000638011 SELENOOQ9BVL4 669 aa17.42■□□□□ 0.38
UBE3A-227ENST00000638011 PPFIA2O75334 1257 aa17.41■□□□□ 0.38
UBE3A-227ENST00000638011 FOXD1Q16676 465 aa17.41■□□□□ 0.38
UBE3A-227ENST00000638011 TSNAXIP1Q2TAA8 658 aa17.41■□□□□ 0.38
UBE3A-227ENST00000638011 RAB3IL1Q8TBN0 382 aa17.41■□□□□ 0.38
UBE3A-227ENST00000638011 NEUROD6Q96NK8 337 aa17.41■□□□□ 0.38
UBE3A-227ENST00000638011 VCXQ9H320 206 aa17.41■□□□□ 0.38
UBE3A-227ENST00000638011 CWC25Q9NXE8 425 aaPredicted RBP17.41■□□□□ 0.38
UBE3A-227ENST00000638011 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
UBE3A-227ENST00000638011 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 PPFIBP2Q8ND30 876 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
UBE3A-227ENST00000638011 ARHGAP25P42331 645 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 ZNF853P0CG23 659 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 ALDH3A1P30838 453 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 GBP1P32455 592 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 NUP133Q8WUM0 1156 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 FEZ2Q9UHY8 353 aaPredicted RBP17.4■□□□□ 0.38
UBE3A-227ENST00000638011 ACTN2P35609 894 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 CCDC174Q6PII3 467 aa17.4■□□□□ 0.38
UBE3A-227ENST00000638011 STMN2Q93045 179 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms