RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 PHF14O94880 888 aa22.83■■□□□ 1.25
CTSD-214ENST00000637937 ITPK1Q13572 414 aa22.83■■□□□ 1.25
CTSD-214ENST00000637937 KLHL34Q8N239 644 aa22.83■■□□□ 1.25
CTSD-214ENST00000637937 NFATC2IPQ8NCF5 419 aa22.83■■□□□ 1.25
CTSD-214ENST00000637937 LINC00116Q8NCU8 138 aa22.83■■□□□ 1.25
CTSD-214ENST00000637937 C5P01031 1676 aa22.82■■□□□ 1.24
CTSD-214ENST00000637937 MSL1Q68DK7 614 aa22.81■■□□□ 1.24
CTSD-214ENST00000637937 QSER1Q2KHR3 1735 aa22.81■■□□□ 1.24
CTSD-214ENST00000637937 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
CTSD-214ENST00000637937 MTHFSDQ2M296 383 aaKnown RBP22.8■■□□□ 1.24
CTSD-214ENST00000637937 SMIM5Q71RC9 77 aa22.8■■□□□ 1.24
CTSD-214ENST00000637937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.79■■□□□ 1.24
CTSD-214ENST00000637937 GNPATO15228 680 aa22.79■■□□□ 1.24
CTSD-214ENST00000637937 LGR6Q9HBX8 967 aa22.79■■□□□ 1.24
CTSD-214ENST00000637937 TUBGCP6Q96RT7 1819 aa22.79■■□□□ 1.24
CTSD-214ENST00000637937 COL3A1P02461 1466 aaPredicted RBP22.79■■□□□ 1.24
CTSD-214ENST00000637937 PTCD1O75127 700 aaKnown RBP22.78■■□□□ 1.24
CTSD-214ENST00000637937 C4BP0C0L5 1744 aa22.78■■□□□ 1.24
CTSD-214ENST00000637937 AMIGO3Q86WK7 504 aa22.78■■□□□ 1.24
CTSD-214ENST00000637937 SSFA2P28290 1259 aa22.77■■□□□ 1.24
CTSD-214ENST00000637937 SLC4A9Q96Q91 983 aa22.77■■□□□ 1.24
CTSD-214ENST00000637937 NUDCQ9Y266 331 aa22.77■■□□□ 1.24
CTSD-214ENST00000637937 RNMTO43148 476 aaKnown RBP22.76■■□□□ 1.23
CTSD-214ENST00000637937 SLC52A2Q9HAB3 445 aa22.76■■□□□ 1.23
CTSD-214ENST00000637937 TAF1LQ8IZX4 1826 aa22.75■■□□□ 1.23
CTSD-214ENST00000637937 GAS2L2Q8NHY3 880 aa22.73■■□□□ 1.23
CTSD-214ENST00000637937 RTCBQ9Y3I0 505 aaKnown RBP22.73■■□□□ 1.23
CTSD-214ENST00000637937 MAP3K5Q99683 1374 aa22.73■■□□□ 1.23
CTSD-214ENST00000637937 U2AF1L5P0DN76 240 aaPredicted RBP22.72■■□□□ 1.23
CTSD-214ENST00000637937 U2AF1Q01081 240 aaKnown RBP eCLIP22.72■■□□□ 1.23
CTSD-214ENST00000637937 PRKAR2BP31323 418 aa22.71■■□□□ 1.23
CTSD-214ENST00000637937 TRAPPC3LQ5T215 181 aa22.71■■□□□ 1.23
CTSD-214ENST00000637937 UTRNP46939 3433 aa22.71■■□□□ 1.23
CTSD-214ENST00000637937 RC3H1Q5TC82 1133 aaKnown RBP22.7■■□□□ 1.22
CTSD-214ENST00000637937 GNAT3A8MTJ3 354 aa22.69■■□□□ 1.22
CTSD-214ENST00000637937 SLC39A6Q13433 755 aa22.69■■□□□ 1.22
CTSD-214ENST00000637937 RSPH6AQ9H0K4 717 aa22.69■■□□□ 1.22
CTSD-214ENST00000637937 CNTNAP4Q9C0A0 1308 aa22.68■■□□□ 1.22
CTSD-214ENST00000637937 YY1P25490 414 aa22.68■■□□□ 1.22
CTSD-214ENST00000637937 PHACTR3Q96KR7 559 aa22.68■■□□□ 1.22
CTSD-214ENST00000637937 GPR162Q16538 588 aa22.67■■□□□ 1.22
CTSD-214ENST00000637937 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
CTSD-214ENST00000637937 NLGN2Q8NFZ4 835 aa22.67■■□□□ 1.22
CTSD-214ENST00000637937 UBR3Q6ZT12 1888 aa22.66■■□□□ 1.22
CTSD-214ENST00000637937 SCN11AQ9UI33 1791 aa22.66■■□□□ 1.22
CTSD-214ENST00000637937 COL24A1Q17RW2 1714 aa22.66■■□□□ 1.22
CTSD-214ENST00000637937 RPS6KA4O75676 772 aa22.66■■□□□ 1.22
CTSD-214ENST00000637937 TEFQ10587 303 aa22.66■■□□□ 1.22
CTSD-214ENST00000637937 ARHGEF1Q92888 912 aaKnown RBP22.66■■□□□ 1.22
CTSD-214ENST00000637937 FCHSD2O94868 740 aa22.65■■□□□ 1.22
CTSD-214ENST00000637937 ADRA2BP18089 450 aa22.65■■□□□ 1.22
CTSD-214ENST00000637937 RFC4P35249 363 aa22.65■■□□□ 1.22
CTSD-214ENST00000637937 CRKLP46109 303 aaKnown RBP22.65■■□□□ 1.22
CTSD-214ENST00000637937 DDX10Q13206 875 aaKnown RBP22.65■■□□□ 1.22
CTSD-214ENST00000637937 IL17REQ8NFR9 667 aa22.65■■□□□ 1.22
CTSD-214ENST00000637937 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.21
CTSD-214ENST00000637937 TTC5Q8N0Z6 440 aa22.64■■□□□ 1.21
CTSD-214ENST00000637937 MRC1P22897 1456 aa22.64■■□□□ 1.21
CTSD-214ENST00000637937 ZNF831Q5JPB2 1677 aa22.63■■□□□ 1.21
CTSD-214ENST00000637937 CD2APQ9Y5K6 639 aa22.63■■□□□ 1.21
CTSD-214ENST00000637937 GOLGB1Q14789 3259 aaKnown RBP22.62■■□□□ 1.21
CTSD-214ENST00000637937 NLGN1Q8N2Q7 840 aa22.61■■□□□ 1.21
CTSD-214ENST00000637937 MMP10P09238 476 aa22.6■■□□□ 1.21
CTSD-214ENST00000637937 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
CTSD-214ENST00000637937 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
CTSD-214ENST00000637937 CCDC87Q9NVE4 849 aa22.59■■□□□ 1.21
CTSD-214ENST00000637937 COL5A3P25940 1745 aaPredicted RBP22.58■■□□□ 1.21
CTSD-214ENST00000637937 NEFMP07197 916 aa22.58■■□□□ 1.21
CTSD-214ENST00000637937 CYP19A1P11511 503 aaPredicted RBP22.58■■□□□ 1.21
CTSD-214ENST00000637937 GYS1P13807 737 aa22.58■■□□□ 1.21
CTSD-214ENST00000637937 RALBP1Q15311 655 aa22.58■■□□□ 1.21
CTSD-214ENST00000637937 VSIG10Q8N0Z9 540 aa22.58■■□□□ 1.21
CTSD-214ENST00000637937 ADAMTS7Q9UKP4 1686 aa22.58■■□□□ 1.2
CTSD-214ENST00000637937 ZNF790Q6PG37 636 aa22.57■■□□□ 1.2
CTSD-214ENST00000637937 MCM10Q7L590 875 aa22.56■■□□□ 1.2
CTSD-214ENST00000637937 ZNF496Q96IT1 587 aaPredicted RBP22.56■■□□□ 1.2
CTSD-214ENST00000637937 SRP68Q9UHB9 627 aaKnown RBP22.56■■□□□ 1.2
CTSD-214ENST00000637937 KCPQ6ZWJ8 1503 aa22.56■■□□□ 1.2
CTSD-214ENST00000637937 BTBD11A6QL63 1104 aa22.55■■□□□ 1.2
CTSD-214ENST00000637937 STARD3NLO95772 234 aa22.55■■□□□ 1.2
CTSD-214ENST00000637937 TJP1Q07157 1748 aa22.54■■□□□ 1.2
CTSD-214ENST00000637937 CEMIPQ8WUJ3 1361 aa22.54■■□□□ 1.2
CTSD-214ENST00000637937 MYH14Q7Z406 1995 aaKnown RBP22.53■■□□□ 1.2
CTSD-214ENST00000637937 ZPR1O75312 459 aa22.53■■□□□ 1.2
CTSD-214ENST00000637937 DCTN1Q14203 1278 aa22.53■■□□□ 1.2
CTSD-214ENST00000637937 ZBTB1Q9Y2K1 713 aa22.53■■□□□ 1.2
CTSD-214ENST00000637937 PARP3Q9Y6F1 533 aa22.53■■□□□ 1.2
CTSD-214ENST00000637937 USP42Q9H9J4 1324 aaKnown RBP22.53■■□□□ 1.2
CTSD-214ENST00000637937 GRIN3BO60391 1043 aa22.52■■□□□ 1.2
CTSD-214ENST00000637937 YBX3P16989 372 aaKnown RBP eCLIP22.52■■□□□ 1.2
CTSD-214ENST00000637937 CANXP27824 592 aaKnown RBP22.52■■□□□ 1.2
CTSD-214ENST00000637937 FMNL2Q96PY5 1086 aa22.52■■□□□ 1.2
CTSD-214ENST00000637937 PNNQ9H307 717 aaKnown RBP22.52■■□□□ 1.2
CTSD-214ENST00000637937 SOS1Q07889 1333 aaPredicted RBP22.52■■□□□ 1.2
CTSD-214ENST00000637937 HTATSF1O43719 755 aaKnown RBP22.51■■□□□ 1.19
CTSD-214ENST00000637937 FKBP8Q14318 412 aa22.51■■□□□ 1.19
CTSD-214ENST00000637937 TEX13AQ9BXU3 409 aaPredicted RBP22.51■■□□□ 1.19
CTSD-214ENST00000637937 WWC3Q9ULE0 1092 aa22.51■■□□□ 1.19
CTSD-214ENST00000637937 HEG1Q9ULI3 1381 aa22.5■■□□□ 1.19
CTSD-214ENST00000637937 VIRMAQ69YN4 1812 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms