RNA–Protein interactions for RNA: ENST00000636940.1

ARID1B-221, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 5,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-221ENST00000636940 TAF12Q16514 161 aa11.94□□□□□ -0.5
ARID1B-221ENST00000636940 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
ARID1B-221ENST00000636940 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
ARID1B-221ENST00000636940 JDP2Q8WYK2 163 aa11.94□□□□□ -0.5
ARID1B-221ENST00000636940 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
ARID1B-221ENST00000636940 PCF11O94913 1555 aaKnown RBP11.94□□□□□ -0.5
ARID1B-221ENST00000636940 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
ARID1B-221ENST00000636940 ATF7IPQ6VMQ6 1270 aa11.94□□□□□ -0.5
ARID1B-221ENST00000636940 NAT10Q9H0A0 1025 aaKnown RBP11.94□□□□□ -0.5
ARID1B-221ENST00000636940 ACSBG1Q96GR2 724 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 ENOX2Q16206 610 aaKnown RBP11.93□□□□□ -0.5
ARID1B-221ENST00000636940 KRT28Q7Z3Y7 464 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 OGFOD1Q8N543 542 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 MNS1Q8NEH6 495 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 HDAC9Q9UKV0 1011 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 SMC2O95347 1197 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 PLS1Q14651 629 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
ARID1B-221ENST00000636940 SLF2Q8IX21 1173 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 ZNF444Q8N0Y2 327 aaPredicted RBP11.93□□□□□ -0.5
ARID1B-221ENST00000636940 SMARCE1Q969G3 411 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 ZNHIT6Q9NWK9 470 aaKnown RBP11.93□□□□□ -0.5
ARID1B-221ENST00000636940 BRD4O60885 1362 aaPredicted RBP11.93□□□□□ -0.5
ARID1B-221ENST00000636940 HIP1O00291 1037 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 GJA3Q9Y6H8 435 aa11.93□□□□□ -0.5
ARID1B-221ENST00000636940 SLC4A8Q2Y0W8 1093 aa11.92□□□□□ -0.5
ARID1B-221ENST00000636940 CWC27Q6UX04 472 aaKnown RBP11.92□□□□□ -0.5
ARID1B-221ENST00000636940 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
ARID1B-221ENST00000636940 CCDC150Q8NCX0 1101 aa11.92□□□□□ -0.5
ARID1B-221ENST00000636940 GPTP24298 496 aa11.92□□□□□ -0.5
ARID1B-221ENST00000636940 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
ARID1B-221ENST00000636940 DHX8Q14562 1220 aaKnown RBP11.92□□□□□ -0.5
ARID1B-221ENST00000636940 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
ARID1B-221ENST00000636940 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
ARID1B-221ENST00000636940 CCT4P50991 539 aaKnown RBP11.92□□□□□ -0.5
ARID1B-221ENST00000636940 EHMT1Q9H9B1 1298 aa11.92□□□□□ -0.5
ARID1B-221ENST00000636940 VEZTQ9HBM0 779 aa11.92□□□□□ -0.5
ARID1B-221ENST00000636940 F8W031 263 aaPredicted RBP11.91□□□□□ -0.5
ARID1B-221ENST00000636940 ERLIN2O94905 339 aa11.91□□□□□ -0.5
ARID1B-221ENST00000636940 EZRP15311 586 aaKnown RBP11.91□□□□□ -0.5
ARID1B-221ENST00000636940 MRPS9P82933 396 aaKnown RBP11.91□□□□□ -0.5
ARID1B-221ENST00000636940 CBX1P83916 185 aa11.91□□□□□ -0.5
ARID1B-221ENST00000636940 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
ARID1B-221ENST00000636940 MPNDQ8N594 471 aa11.91□□□□□ -0.5
ARID1B-221ENST00000636940 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
ARID1B-221ENST00000636940 PIP4K2AP48426 406 aaPredicted RBP11.91□□□□□ -0.5
ARID1B-221ENST00000636940 UQCRHP07919 91 aa11.9□□□□□ -0.5
ARID1B-221ENST00000636940 CKAP2LQ8IYA6 745 aa11.9□□□□□ -0.5
ARID1B-221ENST00000636940 GNAT3A8MTJ3 354 aa11.9□□□□□ -0.5
ARID1B-221ENST00000636940 KINO60870 393 aaKnown RBP11.9□□□□□ -0.5
ARID1B-221ENST00000636940 RGS22Q8NE09 1264 aa11.9□□□□□ -0.5
ARID1B-221ENST00000636940 HSPA2P54652 639 aa11.9□□□□□ -0.5
ARID1B-221ENST00000636940 NME9Q86XW9 330 aa11.9□□□□□ -0.5
ARID1B-221ENST00000636940 NOD1Q9Y239 953 aa11.9□□□□□ -0.5
ARID1B-221ENST00000636940 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.51
ARID1B-221ENST00000636940 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
ARID1B-221ENST00000636940 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
ARID1B-221ENST00000636940 FERMT2Q96AC1 680 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 MYD88Q99836 296 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 CYP46A1Q9Y6A2 500 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 TAX1BP1Q86VP1 789 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 TRIM5Q9C035 493 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 LUC7LQ9NQ29 371 aaKnown RBP11.89□□□□□ -0.51
ARID1B-221ENST00000636940 BIRC2Q13490 618 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 FAM13BQ9NYF5 915 aa11.89□□□□□ -0.51
ARID1B-221ENST00000636940 MAP7D2Q96T17 732 aa11.88□□□□□ -0.51
ARID1B-221ENST00000636940 EXOC6BQ9Y2D4 811 aa11.88□□□□□ -0.51
ARID1B-221ENST00000636940 SSX2IPQ9Y2D8 614 aa11.88□□□□□ -0.51
ARID1B-221ENST00000636940 ACBD3Q9H3P7 528 aa11.88□□□□□ -0.51
ARID1B-221ENST00000636940 RANBP6O60518 1105 aaKnown RBP11.88□□□□□ -0.51
ARID1B-221ENST00000636940 HLA-DOAP06340 250 aa11.88□□□□□ -0.51
ARID1B-221ENST00000636940 GCC1Q96CN9 775 aa11.88□□□□□ -0.51
ARID1B-221ENST00000636940 EPB41L2O43491 1005 aaKnown RBP11.88□□□□□ -0.51
ARID1B-221ENST00000636940 HSP90B2PQ58FF3 399 aa11.88□□□□□ -0.51
ARID1B-221ENST00000636940 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
ARID1B-221ENST00000636940 ZNF396Q96N95 335 aaPredicted RBP11.88□□□□□ -0.51
ARID1B-221ENST00000636940 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
ARID1B-221ENST00000636940 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
ARID1B-221ENST00000636940 NSD3Q9BZ95 1437 aa11.87□□□□□ -0.51
ARID1B-221ENST00000636940 GBP2P32456 591 aaPredicted RBP11.87□□□□□ -0.51
ARID1B-221ENST00000636940 STK32BQ9NY57 414 aa11.87□□□□□ -0.51
ARID1B-221ENST00000636940 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
ARID1B-221ENST00000636940 ME1P48163 572 aa11.87□□□□□ -0.51
ARID1B-221ENST00000636940 WDR7Q9Y4E6 1490 aa11.87□□□□□ -0.51
ARID1B-221ENST00000636940 ZNF771Q7L3S4 317 aaPredicted RBP11.87□□□□□ -0.51
ARID1B-221ENST00000636940 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
ARID1B-221ENST00000636940 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
ARID1B-221ENST00000636940 DUSP27Q5VZP5 1158 aa11.86□□□□□ -0.51
ARID1B-221ENST00000636940 IDI1Q13907 227 aa11.86□□□□□ -0.51
ARID1B-221ENST00000636940 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
ARID1B-221ENST00000636940 CCDC191Q8NCU4 936 aa11.86□□□□□ -0.51
ARID1B-221ENST00000636940 JAKMIP1Q96N16 626 aaKnown RBP11.86□□□□□ -0.51
ARID1B-221ENST00000636940 VAT1LQ9HCJ6 419 aa11.86□□□□□ -0.51
ARID1B-221ENST00000636940 CETN2P41208 172 aa11.86□□□□□ -0.51
ARID1B-221ENST00000636940 HSP90AA2PQ14568 343 aaPredicted RBP11.86□□□□□ -0.51
ARID1B-221ENST00000636940 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms