RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 NOP2P46087 812 aaKnown RBP8.22□□□□□ -1.09
SCN1A-213ENST00000636759 GPS2Q13227 327 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 HSP90AB3PQ58FF7 597 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 MAP2P11137 1827 aaKnown RBP8.22□□□□□ -1.09
SCN1A-213ENST00000636759 AKAP12Q02952 1782 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 MON2Q7Z3U7 1717 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 HTATSF1O43719 755 aaKnown RBP8.22□□□□□ -1.09
SCN1A-213ENST00000636759 GUCY2CP25092 1073 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 UVSSAQ2YD98 709 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 TMED8Q6PL24 325 aaPredicted RBP8.22□□□□□ -1.09
SCN1A-213ENST00000636759 GAS2L2Q8NHY3 880 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 SIRT1Q96EB6 747 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 CYP2C19P33261 490 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 TDO2P48775 406 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 RARSP54136 660 aaKnown RBP8.22□□□□□ -1.09
SCN1A-213ENST00000636759 SATB1Q01826 763 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 TXLNBQ8N3L3 684 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 TMEM63CQ9P1W3 806 aa8.22□□□□□ -1.09
SCN1A-213ENST00000636759 ADCY5O95622 1261 aa8.21□□□□□ -1.09
SCN1A-213ENST00000636759 CT47A1Q5JQC4 288 aaPredicted RBP8.21□□□□□ -1.09
SCN1A-213ENST00000636759 PCDHB15Q9Y5E8 787 aa8.21□□□□□ -1.09
SCN1A-213ENST00000636759 UBR1Q8IWV7 1749 aa8.21□□□□□ -1.1
SCN1A-213ENST00000636759 SMTNL1A8MU46 457 aa8.21□□□□□ -1.1
SCN1A-213ENST00000636759 REC8O95072 547 aa8.21□□□□□ -1.1
SCN1A-213ENST00000636759 PLEKHF1Q96S99 279 aa8.21□□□□□ -1.1
SCN1A-213ENST00000636759 GOLIM4O00461 696 aa8.21□□□□□ -1.1
SCN1A-213ENST00000636759 DRC1Q96MC2 740 aa8.21□□□□□ -1.1
SCN1A-213ENST00000636759 TNNT1P13805 278 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 MCCP23508 829 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 EGFL6Q8IUX8 553 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 GPT2Q8TD30 523 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 JRKLQ9Y4A0 524 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 LRRC7Q96NW7 1537 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 ABCC11Q96J66 1382 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 MYO1CO00159 1063 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 NRKQ7Z2Y5 1582 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 PNPLA6Q8IY17 1366 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 ANKRD36BQ8N2N9 1353 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 CCDC91Q7Z6B0 441 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 MNS1Q8NEH6 495 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 KIAA1524Q8TCG1 905 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 PLCD4Q9BRC7 762 aa8.2□□□□□ -1.1
SCN1A-213ENST00000636759 N4BP2Q86UW6 1770 aaPredicted RBP8.19□□□□□ -1.1
SCN1A-213ENST00000636759 A0A1B0GUL7 405 aa8.19□□□□□ -1.1
SCN1A-213ENST00000636759 RGPD1P0DJD0 1748 aa8.19□□□□□ -1.1
SCN1A-213ENST00000636759 BMS1Q14692 1282 aaKnown RBP8.19□□□□□ -1.1
SCN1A-213ENST00000636759 NSD2O96028 1365 aa8.19□□□□□ -1.1
SCN1A-213ENST00000636759 YTHDC2Q9H6S0 1430 aaKnown RBP8.19□□□□□ -1.1
SCN1A-213ENST00000636759 CALRP27797 417 aaKnown RBP8.19□□□□□ -1.1
SCN1A-213ENST00000636759 FBXO31Q5XUX0 539 aaPredicted RBP8.19□□□□□ -1.1
SCN1A-213ENST00000636759 TMEM132EQ6IEE7 984 aa8.19□□□□□ -1.1
SCN1A-213ENST00000636759 SYT10Q6XYQ8 523 aa8.19□□□□□ -1.1
SCN1A-213ENST00000636759 CCDC9Q9Y3X0 531 aaKnown RBP8.19□□□□□ -1.1
SCN1A-213ENST00000636759 PAXBP1Q9Y5B6 917 aa8.19□□□□□ -1.1
SCN1A-213ENST00000636759 C3P01024 1663 aa8.19□□□□□ -1.1
SCN1A-213ENST00000636759 CHGAP10645 457 aaKnown RBP8.18□□□□□ -1.1
SCN1A-213ENST00000636759 TPM4P67936 248 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 KRBA2Q6ZNG9 492 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 CCDC191Q8NCU4 936 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 CWC22Q9HCG8 908 aaKnown RBP8.18□□□□□ -1.1
SCN1A-213ENST00000636759 IFT57Q9NWB7 429 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 PPIP5K1Q6PFW1 1433 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 NALCNQ8IZF0 1738 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 TTC31Q49AM3 519 aaPredicted RBP8.18□□□□□ -1.1
SCN1A-213ENST00000636759 C16orf45Q96MC5 204 aaPredicted RBP8.18□□□□□ -1.1
SCN1A-213ENST00000636759 GYS2P54840 703 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 WDR63Q8IWG1 891 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
SCN1A-213ENST00000636759 KIF1CO43896 1103 aaKnown RBP8.17□□□□□ -1.1
SCN1A-213ENST00000636759 MUM1L1Q5H9M0 696 aa8.17□□□□□ -1.1
SCN1A-213ENST00000636759 TOPAZ1Q8N9V7 1692 aa8.17□□□□□ -1.1
SCN1A-213ENST00000636759 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
SCN1A-213ENST00000636759 NEK11Q8NG66 645 aa8.17□□□□□ -1.1
SCN1A-213ENST00000636759 RTF1Q92541 710 aaKnown RBP8.17□□□□□ -1.1
SCN1A-213ENST00000636759 DONSONQ9NYP3 566 aa8.17□□□□□ -1.1
SCN1A-213ENST00000636759 TRIM66O15016 1216 aa8.17□□□□□ -1.1
SCN1A-213ENST00000636759 U2SURPO15042 1029 aaKnown RBP8.17□□□□□ -1.1
SCN1A-213ENST00000636759 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.17□□□□□ -1.1
SCN1A-213ENST00000636759 PYCARDQ9ULZ3 195 aa8.17□□□□□ -1.1
SCN1A-213ENST00000636759 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
SCN1A-213ENST00000636759 FOXD4L4Q8WXT5 416 aaPredicted RBP8.16□□□□□ -1.1
SCN1A-213ENST00000636759 ST7Q9NRC1 585 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.16□□□□□ -1.1
SCN1A-213ENST00000636759 LRRFIP2Q9Y608 721 aaKnown RBP8.16□□□□□ -1.1
SCN1A-213ENST00000636759 CPS1P31327 1500 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 NAA30Q147X3 362 aaPredicted RBP8.16□□□□□ -1.1
SCN1A-213ENST00000636759 NBPF20Q3BBV1 942 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 TICAM2Q86XR7 235 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 SPC24Q8NBT2 197 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 RUNDC1Q96C34 613 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 SLC12A5Q9H2X9 1139 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 RIMS2Q9UQ26 1411 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 A0A1W2PP64 1363 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 RABEP1Q15276 862 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 ZSCAN26Q16670 478 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 GTF3C6Q969F1 213 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 RBM42Q9BTD8 480 aaKnown RBP8.16□□□□□ -1.1
SCN1A-213ENST00000636759 CXorf56Q9H5V9 222 aa8.16□□□□□ -1.1
SCN1A-213ENST00000636759 POLKQ9UBT6 870 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms