RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 SYT17Q9BSW7 474 aa24.56■■□□□ 1.52
CLN6-210ENST00000635747 SSFA2P28290 1259 aa24.54■■□□□ 1.52
CLN6-210ENST00000635747 NFATC2IPQ8NCF5 419 aa24.54■■□□□ 1.52
CLN6-210ENST00000635747 LINC00116Q8NCU8 138 aa24.54■■□□□ 1.52
CLN6-210ENST00000635747 RBM42Q9BTD8 480 aaKnown RBP24.54■■□□□ 1.52
CLN6-210ENST00000635747 NUDCQ9Y266 331 aa24.54■■□□□ 1.52
CLN6-210ENST00000635747 MAP3K5Q99683 1374 aa24.54■■□□□ 1.52
CLN6-210ENST00000635747 COL3A1P02461 1466 aaPredicted RBP24.53■■□□□ 1.52
CLN6-210ENST00000635747 C4BP0C0L5 1744 aa24.53■■□□□ 1.52
CLN6-210ENST00000635747 ITPK1Q13572 414 aa24.53■■□□□ 1.52
CLN6-210ENST00000635747 TAF1LQ8IZX4 1826 aa24.53■■□□□ 1.52
CLN6-210ENST00000635747 TUBGCP6Q96RT7 1819 aa24.52■■□□□ 1.52
CLN6-210ENST00000635747 PPP2R1AP30153 589 aa24.52■■□□□ 1.52
CLN6-210ENST00000635747 MTHFSDQ2M296 383 aaKnown RBP24.52■■□□□ 1.52
CLN6-210ENST00000635747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.5■■□□□ 1.51
CLN6-210ENST00000635747 SLC52A2Q9HAB3 445 aa24.5■■□□□ 1.51
CLN6-210ENST00000635747 GNPATO15228 680 aa24.49■■□□□ 1.51
CLN6-210ENST00000635747 RNMTO43148 476 aaKnown RBP24.49■■□□□ 1.51
CLN6-210ENST00000635747 RC3H1Q5TC82 1133 aaKnown RBP24.49■■□□□ 1.51
CLN6-210ENST00000635747 GAS2L2Q8NHY3 880 aa24.49■■□□□ 1.51
CLN6-210ENST00000635747 PHF14O94880 888 aa24.48■■□□□ 1.51
CLN6-210ENST00000635747 LGR6Q9HBX8 967 aa24.48■■□□□ 1.51
CLN6-210ENST00000635747 COL24A1Q17RW2 1714 aa24.47■■□□□ 1.51
CLN6-210ENST00000635747 PTCD1O75127 700 aaKnown RBP24.47■■□□□ 1.51
CLN6-210ENST00000635747 SLC4A9Q96Q91 983 aa24.47■■□□□ 1.51
CLN6-210ENST00000635747 RTCBQ9Y3I0 505 aaKnown RBP24.46■■□□□ 1.51
CLN6-210ENST00000635747 ZNF831Q5JPB2 1677 aa24.46■■□□□ 1.51
CLN6-210ENST00000635747 CNTNAP4Q9C0A0 1308 aa24.45■■□□□ 1.5
CLN6-210ENST00000635747 MSL1Q68DK7 614 aa24.45■■□□□ 1.5
CLN6-210ENST00000635747 AMIGO3Q86WK7 504 aa24.45■■□□□ 1.5
CLN6-210ENST00000635747 ADRA2BP18089 450 aa24.44■■□□□ 1.5
CLN6-210ENST00000635747 TRAPPC3LQ5T215 181 aa24.44■■□□□ 1.5
CLN6-210ENST00000635747 KLHL34Q8N239 644 aa24.44■■□□□ 1.5
CLN6-210ENST00000635747 SCN11AQ9UI33 1791 aa24.44■■□□□ 1.5
CLN6-210ENST00000635747 GNAT3A8MTJ3 354 aa24.43■■□□□ 1.5
CLN6-210ENST00000635747 U2AF1L5P0DN76 240 aaPredicted RBP24.43■■□□□ 1.5
CLN6-210ENST00000635747 U2AF1Q01081 240 aaKnown RBP eCLIP24.43■■□□□ 1.5
CLN6-210ENST00000635747 RSPH6AQ9H0K4 717 aa24.43■■□□□ 1.5
CLN6-210ENST00000635747 UBR3Q6ZT12 1888 aa24.43■■□□□ 1.5
CLN6-210ENST00000635747 FCHSD2O94868 740 aa24.42■■□□□ 1.5
CLN6-210ENST00000635747 MRC1P22897 1456 aa24.41■■□□□ 1.5
CLN6-210ENST00000635747 RPS6KA4O75676 772 aa24.41■■□□□ 1.5
CLN6-210ENST00000635747 PRKAR2BP31323 418 aa24.41■■□□□ 1.5
CLN6-210ENST00000635747 SMIM5Q71RC9 77 aa24.4■■□□□ 1.5
CLN6-210ENST00000635747 TEFQ10587 303 aa24.39■■□□□ 1.49
CLN6-210ENST00000635747 CD2APQ9Y5K6 639 aa24.38■■□□□ 1.49
CLN6-210ENST00000635747 YY1P25490 414 aa24.37■■□□□ 1.49
CLN6-210ENST00000635747 RFC4P35249 363 aa24.37■■□□□ 1.49
CLN6-210ENST00000635747 CRKLP46109 303 aaKnown RBP24.37■■□□□ 1.49
CLN6-210ENST00000635747 VSIG10Q8N0Z9 540 aa24.37■■□□□ 1.49
CLN6-210ENST00000635747 ARHGEF1Q92888 912 aaKnown RBP24.37■■□□□ 1.49
CLN6-210ENST00000635747 SLC39A6Q13433 755 aa24.36■■□□□ 1.49
CLN6-210ENST00000635747 GPR162Q16538 588 aa24.36■■□□□ 1.49
CLN6-210ENST00000635747 TTC5Q8N0Z6 440 aa24.36■■□□□ 1.49
CLN6-210ENST00000635747 NLGN1Q8N2Q7 840 aa24.36■■□□□ 1.49
CLN6-210ENST00000635747 IL17REQ8NFR9 667 aa24.36■■□□□ 1.49
CLN6-210ENST00000635747 PHACTR3Q96KR7 559 aa24.36■■□□□ 1.49
CLN6-210ENST00000635747 ADAMTS7Q9UKP4 1686 aa24.36■■□□□ 1.49
CLN6-210ENST00000635747 RALBP1Q15311 655 aa24.35■■□□□ 1.49
CLN6-210ENST00000635747 UTRNP46939 3433 aa24.34■■□□□ 1.49
CLN6-210ENST00000635747 NEFMP07197 916 aa24.34■■□□□ 1.49
CLN6-210ENST00000635747 COL5A3P25940 1745 aaPredicted RBP24.33■■□□□ 1.49
CLN6-210ENST00000635747 GOLGB1Q14789 3259 aaKnown RBP24.33■■□□□ 1.49
CLN6-210ENST00000635747 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.49
CLN6-210ENST00000635747 NLGN2Q8NFZ4 835 aa24.33■■□□□ 1.49
CLN6-210ENST00000635747 RTF1Q92541 710 aaKnown RBP24.33■■□□□ 1.49
CLN6-210ENST00000635747 DNAJC10Q8IXB1 793 aa24.32■■□□□ 1.48
CLN6-210ENST00000635747 PNNQ9H307 717 aaKnown RBP24.32■■□□□ 1.48
CLN6-210ENST00000635747 CCDC87Q9NVE4 849 aa24.32■■□□□ 1.48
CLN6-210ENST00000635747 CICQ96RK0 1608 aaPredicted RBP24.32■■□□□ 1.48
CLN6-210ENST00000635747 CEMIPQ8WUJ3 1361 aa24.31■■□□□ 1.48
CLN6-210ENST00000635747 HTATSF1O43719 755 aaKnown RBP24.3■■□□□ 1.48
CLN6-210ENST00000635747 CYP19A1P11511 503 aaPredicted RBP24.3■■□□□ 1.48
CLN6-210ENST00000635747 INTS5Q6P9B9 1019 aaKnown RBP24.3■■□□□ 1.48
CLN6-210ENST00000635747 ZNF790Q6PG37 636 aa24.3■■□□□ 1.48
CLN6-210ENST00000635747 MMP10P09238 476 aa24.29■■□□□ 1.48
CLN6-210ENST00000635747 GYS1P13807 737 aa24.29■■□□□ 1.48
CLN6-210ENST00000635747 ZEB1P37275 1124 aaPredicted RBP24.29■■□□□ 1.48
CLN6-210ENST00000635747 TEX13AQ9BXU3 409 aaPredicted RBP24.29■■□□□ 1.48
CLN6-210ENST00000635747 STARD3NLO95772 234 aa24.28■■□□□ 1.48
CLN6-210ENST00000635747 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
CLN6-210ENST00000635747 KCPQ6ZWJ8 1503 aa24.28■■□□□ 1.48
CLN6-210ENST00000635747 MYH14Q7Z406 1995 aaKnown RBP24.27■■□□□ 1.48
CLN6-210ENST00000635747 VIRMAQ69YN4 1812 aaKnown RBP24.27■■□□□ 1.48
CLN6-210ENST00000635747 GRIN3BO60391 1043 aa24.27■■□□□ 1.48
CLN6-210ENST00000635747 TJP1Q07157 1748 aa24.27■■□□□ 1.48
CLN6-210ENST00000635747 BTBD11A6QL63 1104 aa24.26■■□□□ 1.47
CLN6-210ENST00000635747 FMNL2Q96PY5 1086 aa24.26■■□□□ 1.47
CLN6-210ENST00000635747 ZNF496Q96IT1 587 aaPredicted RBP24.25■■□□□ 1.47
CLN6-210ENST00000635747 PARP3Q9Y6F1 533 aa24.25■■□□□ 1.47
CLN6-210ENST00000635747 ZPR1O75312 459 aa24.24■■□□□ 1.47
CLN6-210ENST00000635747 SOS1Q07889 1333 aaPredicted RBP24.24■■□□□ 1.47
CLN6-210ENST00000635747 USP42Q9H9J4 1324 aaKnown RBP24.24■■□□□ 1.47
CLN6-210ENST00000635747 HEG1Q9ULI3 1381 aa24.24■■□□□ 1.47
CLN6-210ENST00000635747 MCM10Q7L590 875 aa24.22■■□□□ 1.47
CLN6-210ENST00000635747 ZBTB1Q9Y2K1 713 aa24.22■■□□□ 1.47
CLN6-210ENST00000635747 MYBBP1AQ9BQG0 1328 aaKnown RBP24.21■■□□□ 1.47
CLN6-210ENST00000635747 PLEKHF1Q96S99 279 aa24.21■■□□□ 1.47
CLN6-210ENST00000635747 SRP68Q9UHB9 627 aaKnown RBP24.21■■□□□ 1.47
CLN6-210ENST00000635747 MAPK8IP3Q9UPT6 1336 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms