RNA–Protein interactions for RNA: ENST00000635248.1

RABGAP1L-222, Transcript of RAB GTPase activating protein 1 like, human

TSL 5

Gene RABGAP1L, Length 3,074 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RABGAP1L-222	ENST00000635248	FAM98C	Q17RN3	349 aa	Known RBP	13.72	□□□□□ -0.21
RABGAP1L-222	ENST00000635248	UNC5CL	Q8IV45	518 aa		13.72	□□□□□ -0.21
RABGAP1L-222	ENST00000635248	USP21	Q9UK80	565 aa		13.72	□□□□□ -0.21
RABGAP1L-222	ENST00000635248	PRAMEF22	A3QJZ6	481 aa		13.71	□□□□□ -0.21
RABGAP1L-222	ENST00000635248	TRIM27	P14373	513 aa		13.71	□□□□□ -0.21
RABGAP1L-222	ENST00000635248	MRPL50	Q8N5N7	158 aa	Known RBP	13.71	□□□□□ -0.21
RABGAP1L-222	ENST00000635248	KDM6A	O15550	1401 aa	Predicted RBP	13.71	□□□□□ -0.21
RABGAP1L-222	ENST00000635248	SPATA31A1	Q5TZJ5	1347 aa		13.71	□□□□□ -0.21
RABGAP1L-222	ENST00000635248	EIF4A1	P60842	406 aa	Known RBP	13.71	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ALDH1L2	Q3SY69	923 aa		13.71	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	SYTL4	Q96C24	671 aa	Predicted RBP	13.71	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	HSP90AB1	P08238	724 aa	Known RBP	13.7	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	SPATA31A6	Q5VVP1	1343 aa		13.7	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ATF7IP	Q6VMQ6	1270 aa		13.7	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	DZIP1L	Q8IYY4	767 aa	Known RBP	13.7	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ANXA1	P04083	346 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	DDB1	Q16531	1140 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	HDGFL1	Q5TGJ6	251 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ERICH6B	Q5W0A0	696 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ZNF790	Q6PG37	636 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	G2E3	Q7L622	706 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	LRP6	O75581	1613 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	SPATA31A5	Q5VU36	1347 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	SPATA31A7	Q8IWB4	1347 aa		13.69	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	IPO8	O15397	1037 aa	Known RBP	13.68	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	PDE3A	Q14432	1141 aa		13.68	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ZNF428	Q96B54	188 aa		13.68	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ITPRIP	Q8IWB1	547 aa		13.68	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	TTC5	Q8N0Z6	440 aa		13.68	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	STK31	Q9BXU1	1019 aa		13.68	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	KIF16B	Q96L93	1317 aa		13.68	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	PTCD1	O75127	700 aa	Known RBP	13.67	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ZNF496	Q96IT1	587 aa	Predicted RBP	13.67	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	BABAM1	Q9NWV8	329 aa		13.67	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	SLIT2	O94813	1529 aa		13.67	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	TMEM57	Q8N5G2	664 aa		13.67	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	PLCH1	Q4KWH8	1693 aa		13.66	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	CCDC30	Q5VVM6	783 aa		13.66	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.66	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	ACSBG1	Q96GR2	724 aa		13.66	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	AFF2	P51816	1311 aa		13.66	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	BCL9L	Q86UU0	1499 aa		13.66	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	PIP4K2A	P48426	406 aa	Predicted RBP	13.65	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	FAM182B	Q5T319	152 aa		13.65	□□□□□ -0.22
RABGAP1L-222	ENST00000635248		F6X3S4	739 aa		13.65	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	GIGYF1	O75420	1035 aa	Predicted RBP	13.65	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	TMOD3	Q9NYL9	352 aa		13.65	□□□□□ -0.22
RABGAP1L-222	ENST00000635248	SLC4A10	Q6U841	1118 aa		13.65	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	PHAX	Q9H814	394 aa	Known RBP	13.65	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	CHPF2	Q9P2E5	772 aa		13.65	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	NKX1-1	Q15270	411 aa	Predicted RBP	13.64	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	VPS72	Q15906	364 aa		13.64	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	THRAP3	Q9Y2W1	955 aa	Known RBP	13.64	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	LRRC37A3	O60309	1634 aa		13.64	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	ERVV-2	B6SEH9	535 aa		13.64	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	PRIM1	P49642	420 aa	Known RBP	13.64	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	FKBP5	Q13451	457 aa	Predicted RBP	13.63	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	MVP	Q14764	893 aa	Known RBP	13.63	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	MARCH10	Q8NA82	808 aa	Predicted RBP	13.63	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	USP16	Q9Y5T5	823 aa		13.63	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	PARP4	Q9UKK3	1724 aa	Known RBP	13.63	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	PIGB	Q92521	554 aa		13.63	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	ASAP1	Q9ULH1	1129 aa		13.63	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	DISP2	A7MBM2	1401 aa		13.63	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	VIRMA	Q69YN4	1812 aa	Known RBP	13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	PKD1L3	Q7Z443	1732 aa		13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	MS4A1	P11836	297 aa		13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	MYL6B	P14649	208 aa		13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	BRPF1	P55201	1214 aa	Predicted RBP	13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	FLII	Q13045	1269 aa		13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	PROSER3	Q2NL68	480 aa		13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	FMNL2	Q96PY5	1086 aa		13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	RBM42	Q9BTD8	480 aa	Known RBP	13.62	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	AIMP1	Q12904	312 aa	Known RBP	13.61	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	BARGIN	Q6ZT62	677 aa		13.61	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	API5	Q9BZZ5	524 aa	Known RBP	13.61	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	QTRT2	Q9H974	415 aa	Known RBP	13.61	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	SCN11A	Q9UI33	1791 aa		13.61	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	GJD4	Q96KN9	370 aa	Predicted RBP	13.6	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	ARHGAP45	Q92619	1136 aa		13.6	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	NRAP	Q86VF7	1730 aa		13.6	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	SNRPA1	P09661	255 aa	Known RBP	13.6	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	C1orf115	Q9H7X2	142 aa		13.6	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	KCNQ2	O43526	872 aa		13.59	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	SKAP1	Q86WV1	359 aa		13.59	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	DDX19B	Q9UMR2	479 aa		13.59	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	PLEKHG2	Q9H7P9	1386 aa		13.58	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	DBF4	Q9UBU7	674 aa	Predicted RBP	13.58	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.58	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	PCDHB15	Q9Y5E8	787 aa		13.58	□□□□□ -0.23
RABGAP1L-222	ENST00000635248	ATG3	Q9NT62	314 aa		13.58	□□□□□ -0.24
RABGAP1L-222	ENST00000635248	TRPC5	Q9UL62	973 aa	Predicted RBP	13.58	□□□□□ -0.24
RABGAP1L-222	ENST00000635248	HOXB7	P09629	217 aa		13.58	□□□□□ -0.24
RABGAP1L-222	ENST00000635248	TNS2	Q63HR2	1409 aa		13.57	□□□□□ -0.24
RABGAP1L-222	ENST00000635248	SHANK3	Q9BYB0	1731 aa		13.57	□□□□□ -0.24
RABGAP1L-222	ENST00000635248	PTPRC	P08575	1304 aa		13.57	□□□□□ -0.24
RABGAP1L-222	ENST00000635248	KDM3B	Q7LBC6	1761 aa		13.57	□□□□□ -0.24
RABGAP1L-222	ENST00000635248	NWD2	Q9ULI1	1742 aa		13.57	□□□□□ -0.24
RABGAP1L-222	ENST00000635248	A1BG	P04217	495 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms