RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ASAP1Q9ULH1 1129 aa19.54■□□□□ 0.72
CDC42BPB-209ENST00000634889 DLG5Q8TDM6 1919 aa19.54■□□□□ 0.72
CDC42BPB-209ENST00000634889 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
CDC42BPB-209ENST00000634889 C5P01031 1676 aa19.53■□□□□ 0.72
CDC42BPB-209ENST00000634889 ADAMTS8Q9UP79 889 aa19.53■□□□□ 0.72
CDC42BPB-209ENST00000634889 TAF1LQ8IZX4 1826 aa19.53■□□□□ 0.72
CDC42BPB-209ENST00000634889 NFE2L2Q16236 605 aa19.52■□□□□ 0.72
CDC42BPB-209ENST00000634889 IL17REQ8NFR9 667 aa19.52■□□□□ 0.72
CDC42BPB-209ENST00000634889 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
CDC42BPB-209ENST00000634889 ANO8Q9HCE9 1232 aaPredicted RBP19.51■□□□□ 0.71
CDC42BPB-209ENST00000634889 CICQ96RK0 1608 aaPredicted RBP19.51■□□□□ 0.71
CDC42BPB-209ENST00000634889 LOC102724428A0A0B4J2F2 783 aa19.5■□□□□ 0.71
CDC42BPB-209ENST00000634889 SIK1P57059 783 aa19.5■□□□□ 0.71
CDC42BPB-209ENST00000634889 TEFQ10587 303 aa19.5■□□□□ 0.71
CDC42BPB-209ENST00000634889 R3HDM1Q15032 1099 aaKnown RBP19.5■□□□□ 0.71
CDC42BPB-209ENST00000634889 CCDC184Q52MB2 194 aa19.5■□□□□ 0.71
CDC42BPB-209ENST00000634889 RUNDC1Q96C34 613 aa19.5■□□□□ 0.71
CDC42BPB-209ENST00000634889 MRS2Q9HD23 443 aa19.5■□□□□ 0.71
CDC42BPB-209ENST00000634889 STK32BQ9NY57 414 aa19.5■□□□□ 0.71
CDC42BPB-209ENST00000634889 QSER1Q2KHR3 1735 aa19.49■□□□□ 0.71
CDC42BPB-209ENST00000634889 UBR2Q8IWV8 1755 aa19.49■□□□□ 0.71
CDC42BPB-209ENST00000634889 KCNQ4P56696 695 aa19.48■□□□□ 0.71
CDC42BPB-209ENST00000634889 SLC15A2Q16348 729 aa19.48■□□□□ 0.71
CDC42BPB-209ENST00000634889 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
CDC42BPB-209ENST00000634889 PSDA5PKW4 1024 aaPredicted RBP19.47■□□□□ 0.71
CDC42BPB-209ENST00000634889 MCM10Q7L590 875 aa19.47■□□□□ 0.71
CDC42BPB-209ENST00000634889 CCDC146Q8IYE0 955 aa19.47■□□□□ 0.71
CDC42BPB-209ENST00000634889 AKT1S1Q96B36 256 aa19.47■□□□□ 0.71
CDC42BPB-209ENST00000634889 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-209ENST00000634889 LMOD3Q0VAK6 560 aa19.46■□□□□ 0.71
CDC42BPB-209ENST00000634889 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-209ENST00000634889 KCPQ6ZWJ8 1503 aa19.46■□□□□ 0.71
CDC42BPB-209ENST00000634889 COL5A3P25940 1745 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPB-209ENST00000634889 CASZ1Q86V15 1759 aa19.45■□□□□ 0.7
CDC42BPB-209ENST00000634889 ATP6V1AP38606 617 aa19.45■□□□□ 0.7
CDC42BPB-209ENST00000634889 ZNF827Q17R98 1081 aa19.45■□□□□ 0.7
CDC42BPB-209ENST00000634889 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
CDC42BPB-209ENST00000634889 TUBGCP6Q96RT7 1819 aa19.44■□□□□ 0.7
CDC42BPB-209ENST00000634889 RIPK4P57078 832 aa19.44■□□□□ 0.7
CDC42BPB-209ENST00000634889 DCTN1Q14203 1278 aa19.44■□□□□ 0.7
CDC42BPB-209ENST00000634889 TJP1Q07157 1748 aa19.43■□□□□ 0.7
CDC42BPB-209ENST00000634889 PTCD1O75127 700 aaKnown RBP19.43■□□□□ 0.7
CDC42BPB-209ENST00000634889 TTC5Q8N0Z6 440 aa19.43■□□□□ 0.7
CDC42BPB-209ENST00000634889 SLC39A6Q13433 755 aa19.42■□□□□ 0.7
CDC42BPB-209ENST00000634889 ITPK1Q13572 414 aa19.42■□□□□ 0.7
CDC42BPB-209ENST00000634889 ZNF790Q6PG37 636 aa19.42■□□□□ 0.7
CDC42BPB-209ENST00000634889 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
CDC42BPB-209ENST00000634889 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
CDC42BPB-209ENST00000634889 LINC00116Q8NCU8 138 aa19.41■□□□□ 0.7
CDC42BPB-209ENST00000634889 TFCP2L1Q9NZI6 479 aa19.41■□□□□ 0.7
CDC42BPB-209ENST00000634889 UBR3Q6ZT12 1888 aa19.4■□□□□ 0.7
CDC42BPB-209ENST00000634889 TAF7Q15545 349 aaPredicted RBP19.4■□□□□ 0.7
CDC42BPB-209ENST00000634889 VSIG10Q8N0Z9 540 aa19.4■□□□□ 0.7
CDC42BPB-209ENST00000634889 AK7Q96M32 723 aa19.4■□□□□ 0.7
CDC42BPB-209ENST00000634889 LRP5O75197 1615 aa19.4■□□□□ 0.7
CDC42BPB-209ENST00000634889 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
CDC42BPB-209ENST00000634889 RRP7AQ9Y3A4 280 aaKnown RBP19.39■□□□□ 0.69
CDC42BPB-209ENST00000634889 CNTNAP4Q9C0A0 1308 aa19.39■□□□□ 0.69
CDC42BPB-209ENST00000634889 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.69
CDC42BPB-209ENST00000634889 PNPLA7Q6ZV29 1317 aa19.38■□□□□ 0.69
CDC42BPB-209ENST00000634889 HEG1Q9ULI3 1381 aa19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 CCER2I3L3R5 266 aa19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 APAF1O14727 1248 aa19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 NEUROD2Q15784 382 aa19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 RC3H1Q5TC82 1133 aaKnown RBP19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 FLAD1Q8NFF5 587 aa19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 FMNL2Q96PY5 1086 aa19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 TRIM35Q9UPQ4 493 aa19.37■□□□□ 0.69
CDC42BPB-209ENST00000634889 ZNF496Q96IT1 587 aaPredicted RBP19.36■□□□□ 0.69
CDC42BPB-209ENST00000634889 SSFA2P28290 1259 aa19.35■□□□□ 0.69
CDC42BPB-209ENST00000634889 BABAM1Q9NWV8 329 aa19.35■□□□□ 0.69
CDC42BPB-209ENST00000634889 GNPATO15228 680 aa19.34■□□□□ 0.69
CDC42BPB-209ENST00000634889 DNAJC10Q8IXB1 793 aa19.34■□□□□ 0.69
CDC42BPB-209ENST00000634889 SLC16A10Q8TF71 515 aa19.34■□□□□ 0.69
CDC42BPB-209ENST00000634889 TEX13AQ9BXU3 409 aaPredicted RBP19.34■□□□□ 0.69
CDC42BPB-209ENST00000634889 PDGFDQ9GZP0 370 aaPredicted RBP19.34■□□□□ 0.69
CDC42BPB-209ENST00000634889 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.69
CDC42BPB-209ENST00000634889 KCNQ3O43525 872 aa19.33■□□□□ 0.68
CDC42BPB-209ENST00000634889 CRKLP46109 303 aaKnown RBP19.33■□□□□ 0.68
CDC42BPB-209ENST00000634889 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
CDC42BPB-209ENST00000634889 CYP19A1P11511 503 aaPredicted RBP19.32■□□□□ 0.68
CDC42BPB-209ENST00000634889 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
CDC42BPB-209ENST00000634889 MTFR1LQ9H019 292 aa19.32■□□□□ 0.68
CDC42BPB-209ENST00000634889 RTCBQ9Y3I0 505 aaKnown RBP19.32■□□□□ 0.68
CDC42BPB-209ENST00000634889 SRCAPQ6ZRS2 3230 aa19.32■□□□□ 0.68
CDC42BPB-209ENST00000634889 COL24A1Q17RW2 1714 aa19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 RPS6KA4O75676 772 aa19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 STARD3NLO95772 234 aa19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 ADRA2BP18089 450 aa19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 CALD1Q05682 793 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 COL23A1Q86Y22 540 aaPredicted RBP19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 SPON1Q9HCB6 807 aa19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 CCDC87Q9NVE4 849 aa19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 MIS18AQ9NYP9 233 aa19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 LAMB4A4D0S4 1761 aa19.31■□□□□ 0.68
CDC42BPB-209ENST00000634889 SNRPA1P09661 255 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-209ENST00000634889 CCDC27Q2M243 656 aa19.3■□□□□ 0.68
CDC42BPB-209ENST00000634889 INTS5Q6P9B9 1019 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms