RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 RAI14Q9P0K7 980 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 MYL6BP14649 208 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 CCDC121Q6ZUS5 278 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
SRSF4-208ENST00000634348 HOMER2Q9NSB8 354 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 NINLQ9Y2I6 1382 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 CLNS1AP54105 237 aaKnown RBP13.18□□□□□ -0.3
SRSF4-208ENST00000634348 CEP128Q6ZU80 1094 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 STIM2Q9P246 746 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
SRSF4-208ENST00000634348 KIF4AO95239 1232 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 KIF4BQ2VIQ3 1234 aa13.18□□□□□ -0.3
SRSF4-208ENST00000634348 FSD2A1L4K1 749 aa13.17□□□□□ -0.3
SRSF4-208ENST00000634348 LMNTD2Q8IXW0 634 aa13.17□□□□□ -0.3
SRSF4-208ENST00000634348 NAA15Q9BXJ9 866 aaKnown RBP13.17□□□□□ -0.3
SRSF4-208ENST00000634348 BCAR3O75815 825 aa13.17□□□□□ -0.3
SRSF4-208ENST00000634348 TPD52P55327 224 aaPredicted RBP13.17□□□□□ -0.3
SRSF4-208ENST00000634348 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
SRSF4-208ENST00000634348 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
SRSF4-208ENST00000634348 PAFAH1B1P43034 410 aa13.17□□□□□ -0.3
SRSF4-208ENST00000634348 HSF2BPO75031 334 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRSF4-208ENST00000634348 TTC39AQ5SRH9 613 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 CFAP58Q5T655 872 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 MKRN1Q9UHC7 482 aaKnown RBP13.16□□□□□ -0.3
SRSF4-208ENST00000634348 ATF3P18847 181 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
SRSF4-208ENST00000634348 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 CASQ2O14958 399 aaPredicted RBP13.16□□□□□ -0.3
SRSF4-208ENST00000634348 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRSF4-208ENST00000634348 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 SPA17Q15506 151 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 EBAG9O00559 213 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 CCDC178Q5BJE1 867 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
SRSF4-208ENST00000634348 RAB3IL1Q8TBN0 382 aa13.16□□□□□ -0.3
SRSF4-208ENST00000634348 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 MAATS1Q7Z4T9 603 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 WDR63Q8IWG1 891 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 TCP11L2Q8N4U5 519 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
SRSF4-208ENST00000634348 SFPQP23246 707 aaKnown RBP eCLIP13.15□□□□□ -0.3
SRSF4-208ENST00000634348 PRR16Q569H4 304 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 DHX57Q6P158 1386 aaKnown RBP13.15□□□□□ -0.3
SRSF4-208ENST00000634348 DBN1Q16643 649 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
SRSF4-208ENST00000634348 PRIMPOLQ96LW4 560 aa13.15□□□□□ -0.31
SRSF4-208ENST00000634348 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.31
SRSF4-208ENST00000634348 PPFIA2O75334 1257 aa13.14□□□□□ -0.31
SRSF4-208ENST00000634348 HLTFQ14527 1009 aaKnown RBP eCLIP13.14□□□□□ -0.312e-9■□□□□ 9
SRSF4-208ENST00000634348 UPF3BQ9BZI7 483 aaKnown RBP13.14□□□□□ -0.31
SRSF4-208ENST00000634348 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
SRSF4-208ENST00000634348 PRPF31Q8WWY3 499 aaKnown RBP13.14□□□□□ -0.31
SRSF4-208ENST00000634348 WHAMMP3Q1A5X7 153 aa13.14□□□□□ -0.31
SRSF4-208ENST00000634348 CCDC114Q96M63 670 aa13.14□□□□□ -0.31
SRSF4-208ENST00000634348 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
SRSF4-208ENST00000634348 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
SRSF4-208ENST00000634348 MYCBPQ99417 103 aaPredicted RBP13.14□□□□□ -0.31
SRSF4-208ENST00000634348 MAP3K9P80192 1104 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 USO1O60763 962 aaKnown RBP13.13□□□□□ -0.31
SRSF4-208ENST00000634348 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
SRSF4-208ENST00000634348 SREK1Q8WXA9 508 aaKnown RBP13.13□□□□□ -0.31
SRSF4-208ENST00000634348 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 PCK1P35558 622 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 MATR3P43243 847 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRSF4-208ENST00000634348 MIER3Q7Z3K6 550 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 DNA2P51530 1060 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
SRSF4-208ENST00000634348 CAMK4Q16566 473 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 PAXBP1Q9Y5B6 917 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 ZNF365Q70YC5 407 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 VCX3BQ9H321 246 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 CAPN2P17655 700 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
SRSF4-208ENST00000634348 CACNA2D3Q8IZS8 1091 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 PPP1R14CQ8TAE6 165 aa13.13□□□□□ -0.31
SRSF4-208ENST00000634348 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
SRSF4-208ENST00000634348 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
SRSF4-208ENST00000634348 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
SRSF4-208ENST00000634348 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
SRSF4-208ENST00000634348 ERCC3P19447 782 aa13.12□□□□□ -0.31
SRSF4-208ENST00000634348 ATP11AP98196 1134 aa13.12□□□□□ -0.31
SRSF4-208ENST00000634348 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
SRSF4-208ENST00000634348 CWC27Q6UX04 472 aaKnown RBP13.12□□□□□ -0.31
SRSF4-208ENST00000634348 CCDC50Q8IVM0 306 aa13.12□□□□□ -0.31
SRSF4-208ENST00000634348 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
SRSF4-208ENST00000634348 ESCO1Q5FWF5 840 aa13.12□□□□□ -0.31
SRSF4-208ENST00000634348 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
SRSF4-208ENST00000634348 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
SRSF4-208ENST00000634348 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 MCM5P33992 734 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms