RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 F6X3S4 739 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
UBE3A-220ENST00000630424 ZNF444Q8N0Y2 327 aaPredicted RBP16.63■□□□□ 0.25
UBE3A-220ENST00000630424 SLC5A1P13866 664 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 TSPY26PQ9H489 355 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 TNIP1Q15025 636 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 DBF4Q9UBU7 674 aaPredicted RBP16.63■□□□□ 0.25
UBE3A-220ENST00000630424 ADGRL1O94910 1474 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 NEFHP12036 1026 aa16.62■□□□□ 0.25
UBE3A-220ENST00000630424 CCDC82Q8N4S0 544 aa16.62■□□□□ 0.25
UBE3A-220ENST00000630424 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
UBE3A-220ENST00000630424 RFC4P35249 363 aa16.62■□□□□ 0.25
UBE3A-220ENST00000630424 FEZ1Q99689 392 aa16.62■□□□□ 0.25
UBE3A-220ENST00000630424 FANCIQ9NVI1 1328 aa16.62■□□□□ 0.25
UBE3A-220ENST00000630424 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
UBE3A-220ENST00000630424 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
UBE3A-220ENST00000630424 CCDC8Q9H0W5 538 aaPredicted RBP16.61■□□□□ 0.25
UBE3A-220ENST00000630424 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
UBE3A-220ENST00000630424 SPATA32Q96LK8 384 aa16.61■□□□□ 0.25
UBE3A-220ENST00000630424 CCDC192P0DO97 292 aa16.61■□□□□ 0.25
UBE3A-220ENST00000630424 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.61■□□□□ 0.25
UBE3A-220ENST00000630424 CCDC39Q9UFE4 941 aa16.61■□□□□ 0.25
UBE3A-220ENST00000630424 MRE11P49959 708 aa16.61■□□□□ 0.25
UBE3A-220ENST00000630424 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
UBE3A-220ENST00000630424 SPC24Q8NBT2 197 aa16.61■□□□□ 0.25
UBE3A-220ENST00000630424 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
UBE3A-220ENST00000630424 CASTP20810 708 aaKnown RBP16.6■□□□□ 0.25
UBE3A-220ENST00000630424 LDHAL6AQ6ZMR3 332 aa16.6■□□□□ 0.25
UBE3A-220ENST00000630424 IQCA1Q86XH1 822 aa16.6■□□□□ 0.25
UBE3A-220ENST00000630424 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
UBE3A-220ENST00000630424 MX1P20591 662 aa16.6■□□□□ 0.25
UBE3A-220ENST00000630424 DHX8Q14562 1220 aaKnown RBP16.6■□□□□ 0.25
UBE3A-220ENST00000630424 SLF2Q8IX21 1173 aa16.6■□□□□ 0.25
UBE3A-220ENST00000630424 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
UBE3A-220ENST00000630424 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
UBE3A-220ENST00000630424 HYPKQ9NX55 129 aa16.6■□□□□ 0.25
UBE3A-220ENST00000630424 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
UBE3A-220ENST00000630424 CCDC141Q6ZP82 1450 aa16.59■□□□□ 0.25
UBE3A-220ENST00000630424 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
UBE3A-220ENST00000630424 ATP5J2-PTCD1G3V325 749 aa16.59■□□□□ 0.25
UBE3A-220ENST00000630424 NEBLO76041 1014 aa16.59■□□□□ 0.25
UBE3A-220ENST00000630424 CDC5LQ99459 802 aaKnown RBP16.59■□□□□ 0.25
UBE3A-220ENST00000630424 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.25
UBE3A-220ENST00000630424 SSH1Q8WYL5 1049 aa16.58■□□□□ 0.25
UBE3A-220ENST00000630424 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
UBE3A-220ENST00000630424 UPF3BQ9BZI7 483 aaKnown RBP16.58■□□□□ 0.24
UBE3A-220ENST00000630424 MAGI1Q96QZ7 1491 aaPredicted RBP16.58■□□□□ 0.24
UBE3A-220ENST00000630424 HECW1Q76N89 1606 aa16.58■□□□□ 0.24
UBE3A-220ENST00000630424 CCDC181Q5TID7 509 aa16.58■□□□□ 0.24
UBE3A-220ENST00000630424 PRPF40BQ6NWY9 871 aaKnown RBP16.58■□□□□ 0.24
UBE3A-220ENST00000630424 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
UBE3A-220ENST00000630424 DESP17661 470 aa16.58■□□□□ 0.24
UBE3A-220ENST00000630424 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
UBE3A-220ENST00000630424 CCDC196A0A1B0GTZ2 297 aa16.57■□□□□ 0.24
UBE3A-220ENST00000630424 ANKRD24Q8TF21 1146 aa16.57■□□□□ 0.24
UBE3A-220ENST00000630424 PPP4R3AQ6IN85 833 aa16.57■□□□□ 0.24
UBE3A-220ENST00000630424 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
UBE3A-220ENST00000630424 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
UBE3A-220ENST00000630424 MPNDQ8N594 471 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 C8orf37Q96NL8 207 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 LRRFIP2Q9Y608 721 aaKnown RBP16.56■□□□□ 0.24
UBE3A-220ENST00000630424 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 CCP110O43303 1012 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 SSR1P43307 286 aaKnown RBP16.56■□□□□ 0.24
UBE3A-220ENST00000630424 SLFN5Q08AF3 891 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 LDHCP07864 332 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
UBE3A-220ENST00000630424 PPP1R42Q7Z4L9 355 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
UBE3A-220ENST00000630424 ERLIN2O94905 339 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 CUL5Q93034 780 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 MSH6P52701 1360 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 EIF5P55010 431 aaKnown RBP16.55■□□□□ 0.24
UBE3A-220ENST00000630424 GRM1Q13255 1194 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 PLB1Q6P1J6 1458 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
UBE3A-220ENST00000630424 ACSBG1Q96GR2 724 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 ZNF213O14771 459 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
UBE3A-220ENST00000630424 UBA5Q9GZZ9 404 aa16.55■□□□□ 0.24
UBE3A-220ENST00000630424 FLIIQ13045 1269 aa16.54■□□□□ 0.24
UBE3A-220ENST00000630424 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
UBE3A-220ENST00000630424 CEP131Q9UPN4 1083 aa16.54■□□□□ 0.24
UBE3A-220ENST00000630424 ACEP12821 1306 aa16.54■□□□□ 0.24
UBE3A-220ENST00000630424 ANKRD62A6NC57 917 aa16.54■□□□□ 0.24
UBE3A-220ENST00000630424 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
UBE3A-220ENST00000630424 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
UBE3A-220ENST00000630424 CABP5Q9NP86 173 aa16.53■□□□□ 0.24
UBE3A-220ENST00000630424 TXLNBQ8N3L3 684 aa16.53■□□□□ 0.24
UBE3A-220ENST00000630424 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
UBE3A-220ENST00000630424 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
UBE3A-220ENST00000630424 IFIT3O14879 490 aaKnown RBP16.53■□□□□ 0.24
UBE3A-220ENST00000630424 AXDND1Q5T1B0 1012 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms