RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
PKP4-218ENST00000629219 KCNQ4P56696 695 aa12.26□□□□□ -0.45
PKP4-218ENST00000629219 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
PKP4-218ENST00000629219 ZNF530Q6P9A1 599 aaPredicted RBP12.26□□□□□ -0.45
PKP4-218ENST00000629219 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
PKP4-218ENST00000629219 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
PKP4-218ENST00000629219 LOC102724428A0A0B4J2F2 783 aa12.25□□□□□ -0.45
PKP4-218ENST00000629219 SIK1P57059 783 aa12.25□□□□□ -0.45
PKP4-218ENST00000629219 GPR162Q16538 588 aa12.25□□□□□ -0.45
PKP4-218ENST00000629219 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
PKP4-218ENST00000629219 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
PKP4-218ENST00000629219 AKAP4Q5JQC9 854 aa12.24□□□□□ -0.45
PKP4-218ENST00000629219 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
PKP4-218ENST00000629219 NLGN2Q8NFZ4 835 aa12.24□□□□□ -0.45
PKP4-218ENST00000629219 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
PKP4-218ENST00000629219 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
PKP4-218ENST00000629219 SSFA2P28290 1259 aa12.22□□□□□ -0.45
PKP4-218ENST00000629219 IFFO2Q5TF58 517 aa12.22□□□□□ -0.45
PKP4-218ENST00000629219 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
PKP4-218ENST00000629219 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
PKP4-218ENST00000629219 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
PKP4-218ENST00000629219 CNTNAP4Q9C0A0 1308 aa12.2□□□□□ -0.46
PKP4-218ENST00000629219 GIGYF1O75420 1035 aaPredicted RBP12.2□□□□□ -0.46
PKP4-218ENST00000629219 YBX3P16989 372 aaKnown RBP eCLIP12.2□□□□□ -0.46
PKP4-218ENST00000629219 POLD1P28340 1107 aa12.2□□□□□ -0.46
PKP4-218ENST00000629219 CABP4P57796 275 aa12.2□□□□□ -0.46
PKP4-218ENST00000629219 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
PKP4-218ENST00000629219 COL23A1Q86Y22 540 aaPredicted RBP12.2□□□□□ -0.46
PKP4-218ENST00000629219 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
PKP4-218ENST00000629219 AK7Q96M32 723 aa12.2□□□□□ -0.46
PKP4-218ENST00000629219 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
PKP4-218ENST00000629219 TJP1Q07157 1748 aa12.2□□□□□ -0.46
PKP4-218ENST00000629219 ADRA2BP18089 450 aa12.19□□□□□ -0.46
PKP4-218ENST00000629219 PPP2R1AP30153 589 aa12.19□□□□□ -0.46
PKP4-218ENST00000629219 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
PKP4-218ENST00000629219 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
PKP4-218ENST00000629219 NUDCQ9Y266 331 aa12.19□□□□□ -0.46
PKP4-218ENST00000629219 MYH14Q7Z406 1995 aaKnown RBP12.18□□□□□ -0.46
PKP4-218ENST00000629219 HMOX1P09601 288 aa12.18□□□□□ -0.46
PKP4-218ENST00000629219 ITPK1Q13572 414 aa12.18□□□□□ -0.46
PKP4-218ENST00000629219 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
PKP4-218ENST00000629219 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
PKP4-218ENST00000629219 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
PKP4-218ENST00000629219 NFATC2IPQ8NCF5 419 aa12.17□□□□□ -0.46
PKP4-218ENST00000629219 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
PKP4-218ENST00000629219 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
PKP4-218ENST00000629219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
PKP4-218ENST00000629219 FCHSD2O94868 740 aa12.16□□□□□ -0.46
PKP4-218ENST00000629219 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
PKP4-218ENST00000629219 C4AP0C0L4 1744 aa12.16□□□□□ -0.46
PKP4-218ENST00000629219 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
PKP4-218ENST00000629219 U2SURPO15042 1029 aaKnown RBP12.15□□□□□ -0.46
PKP4-218ENST00000629219 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
PKP4-218ENST00000629219 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
PKP4-218ENST00000629219 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
PKP4-218ENST00000629219 GNPATO15228 680 aa12.14□□□□□ -0.47
PKP4-218ENST00000629219 RALBP1Q15311 655 aa12.14□□□□□ -0.47
PKP4-218ENST00000629219 MSL1Q68DK7 614 aa12.14□□□□□ -0.47
PKP4-218ENST00000629219 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
PKP4-218ENST00000629219 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
PKP4-218ENST00000629219 RPS6KA4O75676 772 aa12.13□□□□□ -0.47
PKP4-218ENST00000629219 AMIGO3Q86WK7 504 aa12.13□□□□□ -0.47
PKP4-218ENST00000629219 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
PKP4-218ENST00000629219 LGR6Q9HBX8 967 aa12.13□□□□□ -0.47
PKP4-218ENST00000629219 CD2APQ9Y5K6 639 aa12.13□□□□□ -0.47
PKP4-218ENST00000629219 MSH5O43196 834 aa12.12□□□□□ -0.47
PKP4-218ENST00000629219 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
PKP4-218ENST00000629219 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
PKP4-218ENST00000629219 U2AF1L5P0DN76 240 aaPredicted RBP12.11□□□□□ -0.47
PKP4-218ENST00000629219 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
PKP4-218ENST00000629219 U2AF1Q01081 240 aaKnown RBP eCLIP12.11□□□□□ -0.47
PKP4-218ENST00000629219 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
PKP4-218ENST00000629219 NLGN1Q8N2Q7 840 aa12.11□□□□□ -0.47
PKP4-218ENST00000629219 DLG5Q8TDM6 1919 aa12.1□□□□□ -0.47
PKP4-218ENST00000629219 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
PKP4-218ENST00000629219 PTCD1O75127 700 aaKnown RBP12.1□□□□□ -0.47
PKP4-218ENST00000629219 PHF14O94880 888 aa12.1□□□□□ -0.47
PKP4-218ENST00000629219 CRKLP46109 303 aaKnown RBP12.1□□□□□ -0.47
PKP4-218ENST00000629219 TEFQ10587 303 aa12.1□□□□□ -0.47
PKP4-218ENST00000629219 IL17REQ8NFR9 667 aa12.1□□□□□ -0.47
PKP4-218ENST00000629219 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
PKP4-218ENST00000629219 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
PKP4-218ENST00000629219 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
PKP4-218ENST00000629219 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
PKP4-218ENST00000629219 PHACTR3Q96KR7 559 aa12.09□□□□□ -0.47
PKP4-218ENST00000629219 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
PKP4-218ENST00000629219 WWC3Q9ULE0 1092 aa12.09□□□□□ -0.47
PKP4-218ENST00000629219 HEG1Q9ULI3 1381 aa12.08□□□□□ -0.48
PKP4-218ENST00000629219 CYP19A1P11511 503 aaPredicted RBP12.08□□□□□ -0.48
PKP4-218ENST00000629219 INTS5Q6P9B9 1019 aaKnown RBP12.08□□□□□ -0.48
PKP4-218ENST00000629219 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
PKP4-218ENST00000629219 TTC5Q8N0Z6 440 aa12.08□□□□□ -0.48
PKP4-218ENST00000629219 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
PKP4-218ENST00000629219 KIAA1551Q9HCM1 1747 aa12.08□□□□□ -0.48
PKP4-218ENST00000629219 SOS1Q07889 1333 aaPredicted RBP12.08□□□□□ -0.48
PKP4-218ENST00000629219 USP42Q9H9J4 1324 aaKnown RBP12.08□□□□□ -0.48
PKP4-218ENST00000629219 NEFMP07197 916 aa12.07□□□□□ -0.48
PKP4-218ENST00000629219 GYS1P13807 737 aa12.07□□□□□ -0.48
PKP4-218ENST00000629219 RFC4P35249 363 aa12.07□□□□□ -0.48
PKP4-218ENST00000629219 CNGB1Q14028 1251 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms