RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 TRIM37O94972 964 aa15.03■□□□□ -0
PTPN7-219ENST00000629151 TTC5Q8N0Z6 440 aa15.03■□□□□ -0
PTPN7-219ENST00000629151 E9PSI1 815 aa15.02■□□□□ -0
PTPN7-219ENST00000629151 KCNQ2O43526 872 aa15.02■□□□□ -0
PTPN7-219ENST00000629151 ZNF853P0CG23 659 aa15.02■□□□□ -0
PTPN7-219ENST00000629151 THUMPD2Q9BTF0 503 aaKnown RBP15.02■□□□□ -0
PTPN7-219ENST00000629151 CHMP4AQ9BY43 222 aa15.02■□□□□ -0
PTPN7-219ENST00000629151 MRC1P22897 1456 aa15.01□□□□□ -0.01
PTPN7-219ENST00000629151 PLSCR1O15162 318 aa15.01□□□□□ -0.01
PTPN7-219ENST00000629151 ZNF790Q6PG37 636 aa15.01□□□□□ -0.01
PTPN7-219ENST00000629151 TSPYL4Q9UJ04 414 aa15.01□□□□□ -0.01
PTPN7-219ENST00000629151 ADAMTS7Q9UKP4 1686 aa15□□□□□ -0.01
PTPN7-219ENST00000629151 ATG3Q9NT62 314 aa15□□□□□ -0.01
PTPN7-219ENST00000629151 SHANK3Q9BYB0 1731 aa15□□□□□ -0.01
PTPN7-219ENST00000629151 SOS1Q07889 1333 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-219ENST00000629151 APBA3O96018 575 aa14.99□□□□□ -0.01
PTPN7-219ENST00000629151 TEX13AQ9BXU3 409 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-219ENST00000629151 LAS1LQ9Y4W2 734 aaKnown RBP14.99□□□□□ -0.01
PTPN7-219ENST00000629151 BAG6P46379 1132 aa14.98□□□□□ -0.01
PTPN7-219ENST00000629151 SLC27A3Q5K4L6 730 aa14.98□□□□□ -0.01
PTPN7-219ENST00000629151 VSIG10Q8N0Z9 540 aa14.98□□□□□ -0.01
PTPN7-219ENST00000629151 FMNL2Q96PY5 1086 aa14.98□□□□□ -0.01
PTPN7-219ENST00000629151 ASAP1Q9ULH1 1129 aa14.98□□□□□ -0.01
PTPN7-219ENST00000629151 SLFN5Q08AF3 891 aa14.97□□□□□ -0.01
PTPN7-219ENST00000629151 BRWD3Q6RI45 1802 aa14.96□□□□□ -0.01
PTPN7-219ENST00000629151 SENP3-EIF4A1A0A087X0R7 540 aa14.96□□□□□ -0.01
PTPN7-219ENST00000629151 MBIPQ9NS73 344 aa14.96□□□□□ -0.01
PTPN7-219ENST00000629151 PALLDQ8WX93 1383 aa14.96□□□□□ -0.02
PTPN7-219ENST00000629151 LOC102724428A0A0B4J2F2 783 aa14.95□□□□□ -0.02
PTPN7-219ENST00000629151 HOXB7P09629 217 aa14.95□□□□□ -0.02
PTPN7-219ENST00000629151 SNRPA1P09661 255 aaKnown RBP14.95□□□□□ -0.02
PTPN7-219ENST00000629151 SIK1P57059 783 aa14.95□□□□□ -0.02
PTPN7-219ENST00000629151 EIF4A1P60842 406 aaKnown RBP14.95□□□□□ -0.02
PTPN7-219ENST00000629151 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
PTPN7-219ENST00000629151 ILDR2Q71H61 639 aa14.95□□□□□ -0.02
PTPN7-219ENST00000629151 TRMT2AQ8IZ69 625 aaKnown RBP14.95□□□□□ -0.02
PTPN7-219ENST00000629151 MIS18AQ9NYP9 233 aa14.95□□□□□ -0.02
PTPN7-219ENST00000629151 SCN11AQ9UI33 1791 aa14.94□□□□□ -0.02
PTPN7-219ENST00000629151 CT47B1P0C2W7 299 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-219ENST00000629151 PTF1AQ7RTS3 328 aa14.94□□□□□ -0.02
PTPN7-219ENST00000629151 UPF1Q92900 1129 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTPN7-219ENST00000629151 ZNF496Q96IT1 587 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-219ENST00000629151 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
PTPN7-219ENST00000629151 NHSQ6T4R5 1651 aa14.93□□□□□ -0.02
PTPN7-219ENST00000629151 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
PTPN7-219ENST00000629151 STARD3NLO95772 234 aa14.93□□□□□ -0.02
PTPN7-219ENST00000629151 ZNF428Q96B54 188 aa14.93□□□□□ -0.02
PTPN7-219ENST00000629151 HEG1Q9ULI3 1381 aa14.93□□□□□ -0.02
PTPN7-219ENST00000629151 FANCIQ9NVI1 1328 aa14.92□□□□□ -0.02
PTPN7-219ENST00000629151 GIGYF1O75420 1035 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-219ENST00000629151 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
PTPN7-219ENST00000629151 TXNRD1Q16881 649 aa14.92□□□□□ -0.02
PTPN7-219ENST00000629151 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
PTPN7-219ENST00000629151 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-219ENST00000629151 KCNQ3O43525 872 aa14.91□□□□□ -0.02
PTPN7-219ENST00000629151 CAMKK2Q96RR4 588 aa14.91□□□□□ -0.02
PTPN7-219ENST00000629151 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-219ENST00000629151 DOT1LQ8TEK3 1739 aa14.91□□□□□ -0.02
PTPN7-219ENST00000629151 DLG5Q8TDM6 1919 aa14.9□□□□□ -0.02
PTPN7-219ENST00000629151 TOGARAM1Q9Y4F4 1720 aa14.9□□□□□ -0.02
PTPN7-219ENST00000629151 DUSP27Q5VZP5 1158 aa14.9□□□□□ -0.02
PTPN7-219ENST00000629151 TSR2Q969E8 191 aaKnown RBP14.9□□□□□ -0.02
PTPN7-219ENST00000629151 CDCA7LQ96GN5 454 aa14.9□□□□□ -0.02
PTPN7-219ENST00000629151 EN1Q05925 392 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-219ENST00000629151 RC3H1Q5TC82 1133 aaKnown RBP14.89□□□□□ -0.03
PTPN7-219ENST00000629151 ERBB4Q15303 1308 aa14.89□□□□□ -0.03
PTPN7-219ENST00000629151 EXOSC9Q06265 439 aaKnown RBP14.88□□□□□ -0.03
PTPN7-219ENST00000629151 TWISTNBQ3B726 338 aaPredicted RBP14.88□□□□□ -0.03
PTPN7-219ENST00000629151 CCDC30Q5VVM6 783 aa14.87□□□□□ -0.03
PTPN7-219ENST00000629151 DNAJC10Q8IXB1 793 aa14.87□□□□□ -0.03
PTPN7-219ENST00000629151 PROM2Q8N271 834 aa14.87□□□□□ -0.03
PTPN7-219ENST00000629151 C8orf58Q8NAV2 365 aa14.87□□□□□ -0.03
PTPN7-219ENST00000629151 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
PTPN7-219ENST00000629151 VAMP4O75379 141 aa14.86□□□□□ -0.03
PTPN7-219ENST00000629151 CYP19A1P11511 503 aaPredicted RBP14.86□□□□□ -0.03
PTPN7-219ENST00000629151 NBPF14Q5TI25 921 aa14.86□□□□□ -0.03
PTPN7-219ENST00000629151 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
PTPN7-219ENST00000629151 SBF2Q86WG5 1849 aa14.86□□□□□ -0.03
PTPN7-219ENST00000629151 KCPQ6ZWJ8 1503 aa14.86□□□□□ -0.03
PTPN7-219ENST00000629151 ITGB4P16144 1822 aa14.85□□□□□ -0.03
PTPN7-219ENST00000629151 ITPK1Q13572 414 aa14.85□□□□□ -0.03
PTPN7-219ENST00000629151 EZH2Q15910 746 aaKnown RBP14.85□□□□□ -0.03
PTPN7-219ENST00000629151 HDGFL1Q5TGJ6 251 aa14.85□□□□□ -0.03
PTPN7-219ENST00000629151 DEFB132Q7Z7B7 95 aa14.85□□□□□ -0.03
PTPN7-219ENST00000629151 DBF4Q9UBU7 674 aaPredicted RBP14.85□□□□□ -0.03
PTPN7-219ENST00000629151 USP16Q9Y5T5 823 aa14.85□□□□□ -0.03
PTPN7-219ENST00000629151 CNTNAP4Q9C0A0 1308 aa14.85□□□□□ -0.03
PTPN7-219ENST00000629151 SIPA1L3O60292 1781 aaPredicted RBP14.85□□□□□ -0.03
PTPN7-219ENST00000629151 ELL2O00472 640 aaPredicted RBP14.84□□□□□ -0.03
PTPN7-219ENST00000629151 FLAD1Q8NFF5 587 aa14.84□□□□□ -0.03
PTPN7-219ENST00000629151 STK31Q9BXU1 1019 aa14.84□□□□□ -0.03
PTPN7-219ENST00000629151 LRRC4BQ9NT99 713 aa14.84□□□□□ -0.03
PTPN7-219ENST00000629151 CCDC87Q9NVE4 849 aa14.84□□□□□ -0.03
PTPN7-219ENST00000629151 BTAF1O14981 1849 aa14.83□□□□□ -0.04
PTPN7-219ENST00000629151 EIF2S2P20042 333 aaKnown RBP14.83□□□□□ -0.04
PTPN7-219ENST00000629151 ALDH1L2Q3SY69 923 aa14.83□□□□□ -0.04
PTPN7-219ENST00000629151 TSPYL6Q8N831 410 aa14.83□□□□□ -0.04
PTPN7-219ENST00000629151 PAPPAQ13219 1627 aa14.83□□□□□ -0.04
PTPN7-219ENST00000629151 ZNF831Q5JPB2 1677 aa14.82□□□□□ -0.04
PTPN7-219ENST00000629151 A0A087WZG4 1122 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms