RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 COL24A1Q17RW2 1714 aa23.21■■□□□ 1.31
SPTAN1-214ENST00000628614 COL3A1P02461 1466 aaPredicted RBP23.2■■□□□ 1.3
SPTAN1-214ENST00000628614 HMOX1P09601 288 aa23.2■■□□□ 1.3
SPTAN1-214ENST00000628614 ATP6V1AP38606 617 aa23.19■■□□□ 1.3
SPTAN1-214ENST00000628614 AKAP4Q5JQC9 854 aa23.19■■□□□ 1.3
SPTAN1-214ENST00000628614 LINC00116Q8NCU8 138 aa23.19■■□□□ 1.3
SPTAN1-214ENST00000628614 SSFA2P28290 1259 aa23.16■■□□□ 1.3
SPTAN1-214ENST00000628614 ITPK1Q13572 414 aa23.16■■□□□ 1.3
SPTAN1-214ENST00000628614 CFAP53Q96M91 514 aa23.15■■□□□ 1.3
SPTAN1-214ENST00000628614 RBM42Q9BTD8 480 aaKnown RBP23.15■■□□□ 1.3
SPTAN1-214ENST00000628614 ZNF831Q5JPB2 1677 aa23.15■■□□□ 1.3
SPTAN1-214ENST00000628614 UBR3Q6ZT12 1888 aa23.14■■□□□ 1.29
SPTAN1-214ENST00000628614 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
SPTAN1-214ENST00000628614 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
SPTAN1-214ENST00000628614 PHF14O94880 888 aa23.13■■□□□ 1.29
SPTAN1-214ENST00000628614 MSL1Q68DK7 614 aa23.13■■□□□ 1.29
SPTAN1-214ENST00000628614 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
SPTAN1-214ENST00000628614 SCN11AQ9UI33 1791 aa23.12■■□□□ 1.29
SPTAN1-214ENST00000628614 GNPATO15228 680 aa23.12■■□□□ 1.29
SPTAN1-214ENST00000628614 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
SPTAN1-214ENST00000628614 KLHL34Q8N239 644 aa23.12■■□□□ 1.29
SPTAN1-214ENST00000628614 MTHFSDQ2M296 383 aaKnown RBP23.11■■□□□ 1.29
SPTAN1-214ENST00000628614 SLC4A9Q96Q91 983 aa23.11■■□□□ 1.29
SPTAN1-214ENST00000628614 SLC52A2Q9HAB3 445 aa23.1■■□□□ 1.29
SPTAN1-214ENST00000628614 MRC1P22897 1456 aa23.1■■□□□ 1.29
SPTAN1-214ENST00000628614 UTRNP46939 3433 aa23.09■■□□□ 1.29
SPTAN1-214ENST00000628614 RNMTO43148 476 aaKnown RBP23.09■■□□□ 1.29
SPTAN1-214ENST00000628614 PPP2R1AP30153 589 aa23.09■■□□□ 1.29
SPTAN1-214ENST00000628614 PTCD1O75127 700 aaKnown RBP23.08■■□□□ 1.29
SPTAN1-214ENST00000628614 RC3H1Q5TC82 1133 aaKnown RBP23.08■■□□□ 1.29
SPTAN1-214ENST00000628614 LGR6Q9HBX8 967 aa23.08■■□□□ 1.29
SPTAN1-214ENST00000628614 NUDCQ9Y266 331 aa23.08■■□□□ 1.29
SPTAN1-214ENST00000628614 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.28
SPTAN1-214ENST00000628614 SMIM5Q71RC9 77 aa23.07■■□□□ 1.28
SPTAN1-214ENST00000628614 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
SPTAN1-214ENST00000628614 COL5A3P25940 1745 aaPredicted RBP23.07■■□□□ 1.28
SPTAN1-214ENST00000628614 YY1P25490 414 aa23.06■■□□□ 1.28
SPTAN1-214ENST00000628614 GAS2L2Q8NHY3 880 aa23.06■■□□□ 1.28
SPTAN1-214ENST00000628614 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
SPTAN1-214ENST00000628614 CICQ96RK0 1608 aaPredicted RBP23.04■■□□□ 1.28
SPTAN1-214ENST00000628614 ADRA2BP18089 450 aa23.04■■□□□ 1.28
SPTAN1-214ENST00000628614 TRAPPC3LQ5T215 181 aa23.04■■□□□ 1.28
SPTAN1-214ENST00000628614 RPS6KA4O75676 772 aa23.02■■□□□ 1.28
SPTAN1-214ENST00000628614 NLGN2Q8NFZ4 835 aa23.02■■□□□ 1.28
SPTAN1-214ENST00000628614 RSPH6AQ9H0K4 717 aa23.02■■□□□ 1.28
SPTAN1-214ENST00000628614 GNAT3A8MTJ3 354 aa23.01■■□□□ 1.27
SPTAN1-214ENST00000628614 PRKAR2BP31323 418 aa23.01■■□□□ 1.27
SPTAN1-214ENST00000628614 GPR162Q16538 588 aa23.01■■□□□ 1.27
SPTAN1-214ENST00000628614 CD2APQ9Y5K6 639 aa23.01■■□□□ 1.27
SPTAN1-214ENST00000628614 VIRMAQ69YN4 1812 aaKnown RBP23.01■■□□□ 1.27
SPTAN1-214ENST00000628614 TJP1Q07157 1748 aa23■■□□□ 1.27
SPTAN1-214ENST00000628614 U2AF1L5P0DN76 240 aaPredicted RBP23■■□□□ 1.27
SPTAN1-214ENST00000628614 CRKLP46109 303 aaKnown RBP23■■□□□ 1.27
SPTAN1-214ENST00000628614 U2AF1Q01081 240 aaKnown RBP eCLIP23■■□□□ 1.27
SPTAN1-214ENST00000628614 GOLGB1Q14789 3259 aaKnown RBP23■■□□□ 1.27
SPTAN1-214ENST00000628614 SLC39A6Q13433 755 aa22.99■■□□□ 1.27
SPTAN1-214ENST00000628614 RFC4P35249 363 aa22.98■■□□□ 1.27
SPTAN1-214ENST00000628614 ARHGEF1Q92888 912 aaKnown RBP22.98■■□□□ 1.27
SPTAN1-214ENST00000628614 KCPQ6ZWJ8 1503 aa22.98■■□□□ 1.27
SPTAN1-214ENST00000628614 FCHSD2O94868 740 aa22.97■■□□□ 1.27
SPTAN1-214ENST00000628614 TEFQ10587 303 aa22.97■■□□□ 1.27
SPTAN1-214ENST00000628614 PELP1Q8IZL8 1130 aaKnown RBP22.97■■□□□ 1.27
SPTAN1-214ENST00000628614 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
SPTAN1-214ENST00000628614 NLGN1Q8N2Q7 840 aa22.96■■□□□ 1.27
SPTAN1-214ENST00000628614 IL17REQ8NFR9 667 aa22.96■■□□□ 1.27
SPTAN1-214ENST00000628614 PHACTR3Q96KR7 559 aa22.96■■□□□ 1.27
SPTAN1-214ENST00000628614 MYH14Q7Z406 1995 aaKnown RBP22.96■■□□□ 1.27
SPTAN1-214ENST00000628614 DNAJC10Q8IXB1 793 aa22.95■■□□□ 1.26
SPTAN1-214ENST00000628614 VSIG10Q8N0Z9 540 aa22.95■■□□□ 1.26
SPTAN1-214ENST00000628614 CEMIPQ8WUJ3 1361 aa22.94■■□□□ 1.26
SPTAN1-214ENST00000628614 MMP10P09238 476 aa22.94■■□□□ 1.26
SPTAN1-214ENST00000628614 CCDC87Q9NVE4 849 aa22.94■■□□□ 1.26
SPTAN1-214ENST00000628614 GYS1P13807 737 aa22.93■■□□□ 1.26
SPTAN1-214ENST00000628614 INTS5Q6P9B9 1019 aaKnown RBP22.93■■□□□ 1.26
SPTAN1-214ENST00000628614 C4AP0C0L4 1744 aa22.93■■□□□ 1.26
SPTAN1-214ENST00000628614 UBR2Q8IWV8 1755 aa22.92■■□□□ 1.26
SPTAN1-214ENST00000628614 CYP19A1P11511 503 aaPredicted RBP22.92■■□□□ 1.26
SPTAN1-214ENST00000628614 ZNF790Q6PG37 636 aa22.91■■□□□ 1.26
SPTAN1-214ENST00000628614 USP42Q9H9J4 1324 aaKnown RBP22.9■■□□□ 1.26
SPTAN1-214ENST00000628614 GRIN3BO60391 1043 aa22.9■■□□□ 1.26
SPTAN1-214ENST00000628614 RTF1Q92541 710 aaKnown RBP22.9■■□□□ 1.26
SPTAN1-214ENST00000628614 SIPA1L3O60292 1781 aaPredicted RBP22.9■■□□□ 1.26
SPTAN1-214ENST00000628614 SOS1Q07889 1333 aaPredicted RBP22.89■■□□□ 1.26
SPTAN1-214ENST00000628614 YBX3P16989 372 aaKnown RBP eCLIP22.89■■□□□ 1.25
SPTAN1-214ENST00000628614 RALBP1Q15311 655 aa22.89■■□□□ 1.25
SPTAN1-214ENST00000628614 CHD4Q14839 1912 aa22.88■■□□□ 1.25
SPTAN1-214ENST00000628614 NEFMP07197 916 aa22.88■■□□□ 1.25
SPTAN1-214ENST00000628614 PARP3Q9Y6F1 533 aa22.88■■□□□ 1.25
SPTAN1-214ENST00000628614 HEG1Q9ULI3 1381 aa22.88■■□□□ 1.25
SPTAN1-214ENST00000628614 STARD3NLO95772 234 aa22.87■■□□□ 1.25
SPTAN1-214ENST00000628614 DDX10Q13206 875 aaKnown RBP22.87■■□□□ 1.25
SPTAN1-214ENST00000628614 ZNF496Q96IT1 587 aaPredicted RBP22.87■■□□□ 1.25
SPTAN1-214ENST00000628614 SRP68Q9UHB9 627 aaKnown RBP22.87■■□□□ 1.25
SPTAN1-214ENST00000628614 BTBD11A6QL63 1104 aa22.86■■□□□ 1.25
SPTAN1-214ENST00000628614 HTATSF1O43719 755 aaKnown RBP22.86■■□□□ 1.25
SPTAN1-214ENST00000628614 ZPR1O75312 459 aa22.86■■□□□ 1.25
SPTAN1-214ENST00000628614 FMNL2Q96PY5 1086 aa22.86■■□□□ 1.25
SPTAN1-214ENST00000628614 TEX13AQ9BXU3 409 aaPredicted RBP22.86■■□□□ 1.25
SPTAN1-214ENST00000628614 ZBTB1Q9Y2K1 713 aa22.86■■□□□ 1.25
SPTAN1-214ENST00000628614 COL15A1P39059 1388 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms