RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 SCN11AQ9UI33 1791 aa14.16□□□□□ -0.14
TMCO1-209ENST00000628579 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
TMCO1-209ENST00000628579 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
TMCO1-209ENST00000628579 ATP6V1AP38606 617 aa14.15□□□□□ -0.14
TMCO1-209ENST00000628579 MTHFSDQ2M296 383 aaKnown RBP14.15□□□□□ -0.14
TMCO1-209ENST00000628579 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
TMCO1-209ENST00000628579 NFATC2IPQ8NCF5 419 aa14.15□□□□□ -0.14
TMCO1-209ENST00000628579 AK7Q96M32 723 aa14.15□□□□□ -0.14
TMCO1-209ENST00000628579 SLC4A9Q96Q91 983 aa14.15□□□□□ -0.14
TMCO1-209ENST00000628579 SYT17Q9BSW7 474 aa14.15□□□□□ -0.14
TMCO1-209ENST00000628579 UTRNP46939 3433 aa14.14□□□□□ -0.15
TMCO1-209ENST00000628579 PHF14O94880 888 aa14.14□□□□□ -0.15
TMCO1-209ENST00000628579 PPP2R1AP30153 589 aa14.14□□□□□ -0.15
TMCO1-209ENST00000628579 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
TMCO1-209ENST00000628579 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
TMCO1-209ENST00000628579 LGR6Q9HBX8 967 aa14.14□□□□□ -0.15
TMCO1-209ENST00000628579 VIRMAQ69YN4 1812 aaKnown RBP14.13□□□□□ -0.15
TMCO1-209ENST00000628579 ZNF831Q5JPB2 1677 aa14.12□□□□□ -0.15
TMCO1-209ENST00000628579 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
TMCO1-209ENST00000628579 PTCD1O75127 700 aaKnown RBP14.12□□□□□ -0.15
TMCO1-209ENST00000628579 POLD1P28340 1107 aa14.12□□□□□ -0.15
TMCO1-209ENST00000628579 COL5A3P25940 1745 aaPredicted RBP14.12□□□□□ -0.15
TMCO1-209ENST00000628579 MRC1P22897 1456 aa14.12□□□□□ -0.15
TMCO1-209ENST00000628579 ADAMTS7Q9UKP4 1686 aa14.11□□□□□ -0.15
TMCO1-209ENST00000628579 GNPATO15228 680 aa14.11□□□□□ -0.15
TMCO1-209ENST00000628579 RNMTO43148 476 aaKnown RBP14.11□□□□□ -0.15
TMCO1-209ENST00000628579 HMGB2P26583 209 aaKnown RBP14.11□□□□□ -0.15
TMCO1-209ENST00000628579 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
TMCO1-209ENST00000628579 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
TMCO1-209ENST00000628579 CFAP53Q96M91 514 aa14.11□□□□□ -0.15
TMCO1-209ENST00000628579 GOLGB1Q14789 3259 aaKnown RBP14.1□□□□□ -0.15
TMCO1-209ENST00000628579 MAP3K5Q99683 1374 aa14.1□□□□□ -0.15
TMCO1-209ENST00000628579 SSFA2P28290 1259 aa14.1□□□□□ -0.15
TMCO1-209ENST00000628579 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
TMCO1-209ENST00000628579 PHACTR3Q96KR7 559 aa14.09□□□□□ -0.15
TMCO1-209ENST00000628579 TJP1Q07157 1748 aa14.09□□□□□ -0.15
TMCO1-209ENST00000628579 PRKAR2BP31323 418 aa14.08□□□□□ -0.16
TMCO1-209ENST00000628579 SLC39A6Q13433 755 aa14.08□□□□□ -0.16
TMCO1-209ENST00000628579 NLGN2Q8NFZ4 835 aa14.08□□□□□ -0.16
TMCO1-209ENST00000628579 RSPH6AQ9H0K4 717 aa14.08□□□□□ -0.16
TMCO1-209ENST00000628579 MYH14Q7Z406 1995 aaKnown RBP14.08□□□□□ -0.16
TMCO1-209ENST00000628579 U2AF1L5P0DN76 240 aaPredicted RBP14.07□□□□□ -0.16
TMCO1-209ENST00000628579 U2AF1Q01081 240 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMCO1-209ENST00000628579 CNTNAP4Q9C0A0 1308 aa14.07□□□□□ -0.16
TMCO1-209ENST00000628579 CICQ96RK0 1608 aaPredicted RBP14.06□□□□□ -0.16
TMCO1-209ENST00000628579 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
TMCO1-209ENST00000628579 IL17REQ8NFR9 667 aa14.06□□□□□ -0.16
TMCO1-209ENST00000628579 NUDCQ9Y266 331 aa14.06□□□□□ -0.16
TMCO1-209ENST00000628579 KCPQ6ZWJ8 1503 aa14.05□□□□□ -0.16
TMCO1-209ENST00000628579 GNAT3A8MTJ3 354 aa14.05□□□□□ -0.16
TMCO1-209ENST00000628579 CRKLP46109 303 aaKnown RBP14.05□□□□□ -0.16
TMCO1-209ENST00000628579 RC3H1Q5TC82 1133 aaKnown RBP14.05□□□□□ -0.16
TMCO1-209ENST00000628579 GAS2L2Q8NHY3 880 aa14.05□□□□□ -0.16
TMCO1-209ENST00000628579 RTCBQ9Y3I0 505 aaKnown RBP14.05□□□□□ -0.16
TMCO1-209ENST00000628579 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
TMCO1-209ENST00000628579 DDX10Q13206 875 aaKnown RBP14.04□□□□□ -0.16
TMCO1-209ENST00000628579 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
TMCO1-209ENST00000628579 DNAJC10Q8IXB1 793 aa14.04□□□□□ -0.16
TMCO1-209ENST00000628579 ARHGEF1Q92888 912 aaKnown RBP14.04□□□□□ -0.16
TMCO1-209ENST00000628579 SIPA1L3O60292 1781 aaPredicted RBP14.04□□□□□ -0.16
TMCO1-209ENST00000628579 UBR2Q8IWV8 1755 aa14.04□□□□□ -0.16
TMCO1-209ENST00000628579 RPS6KA4O75676 772 aa14.03□□□□□ -0.16
TMCO1-209ENST00000628579 YY1P25490 414 aa14.03□□□□□ -0.16
TMCO1-209ENST00000628579 CEMIPQ8WUJ3 1361 aa14.02□□□□□ -0.17
TMCO1-209ENST00000628579 FCHSD2O94868 740 aa14.02□□□□□ -0.17
TMCO1-209ENST00000628579 INTS5Q6P9B9 1019 aaKnown RBP14.02□□□□□ -0.17
TMCO1-209ENST00000628579 MMP10P09238 476 aa14.01□□□□□ -0.17
TMCO1-209ENST00000628579 ADRA2BP18089 450 aa14.01□□□□□ -0.17
TMCO1-209ENST00000628579 TEFQ10587 303 aa14.01□□□□□ -0.17
TMCO1-209ENST00000628579 GPR162Q16538 588 aa14.01□□□□□ -0.17
TMCO1-209ENST00000628579 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
TMCO1-209ENST00000628579 CYP19A1P11511 503 aaPredicted RBP14□□□□□ -0.17
TMCO1-209ENST00000628579 GYS1P13807 737 aa14□□□□□ -0.17
TMCO1-209ENST00000628579 RFC4P35249 363 aa14□□□□□ -0.17
TMCO1-209ENST00000628579 CCDC87Q9NVE4 849 aa14□□□□□ -0.17
TMCO1-209ENST00000628579 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
TMCO1-209ENST00000628579 CD2APQ9Y5K6 639 aa14□□□□□ -0.17
TMCO1-209ENST00000628579 YBX3P16989 372 aaKnown RBP eCLIP13.99□□□□□ -0.17
TMCO1-209ENST00000628579 ZNF790Q6PG37 636 aa13.99□□□□□ -0.17
TMCO1-209ENST00000628579 MCM10Q7L590 875 aa13.99□□□□□ -0.17
TMCO1-209ENST00000628579 ZNF496Q96IT1 587 aaPredicted RBP13.99□□□□□ -0.17
TMCO1-209ENST00000628579 KCNQ3O43525 872 aa13.98□□□□□ -0.17
TMCO1-209ENST00000628579 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
TMCO1-209ENST00000628579 TTC5Q8N0Z6 440 aa13.98□□□□□ -0.17
TMCO1-209ENST00000628579 VSIG10Q8N0Z9 540 aa13.98□□□□□ -0.17
TMCO1-209ENST00000628579 ZBTB1Q9Y2K1 713 aa13.98□□□□□ -0.17
TMCO1-209ENST00000628579 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
TMCO1-209ENST00000628579 USP42Q9H9J4 1324 aaKnown RBP13.97□□□□□ -0.17
TMCO1-209ENST00000628579 RALBP1Q15311 655 aa13.97□□□□□ -0.17
TMCO1-209ENST00000628579 NLGN1Q8N2Q7 840 aa13.97□□□□□ -0.17
TMCO1-209ENST00000628579 PLEKHF1Q96S99 279 aa13.97□□□□□ -0.17
TMCO1-209ENST00000628579 WWC3Q9ULE0 1092 aa13.97□□□□□ -0.17
TMCO1-209ENST00000628579 CHD4Q14839 1912 aa13.96□□□□□ -0.17
TMCO1-209ENST00000628579 BTBD11A6QL63 1104 aa13.96□□□□□ -0.17
TMCO1-209ENST00000628579 FKBP8Q14318 412 aa13.96□□□□□ -0.17
TMCO1-209ENST00000628579 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
TMCO1-209ENST00000628579 DLG5Q8TDM6 1919 aa13.96□□□□□ -0.18
TMCO1-209ENST00000628579 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.18
TMCO1-209ENST00000628579 COL15A1P39059 1388 aa13.95□□□□□ -0.18
TMCO1-209ENST00000628579 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms