RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CLIP2Q9UDT6 1046 aa13.97□□□□□ -0.17
ATRX-214ENST00000624166 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
ATRX-214ENST00000624166 KDM5DQ9BY66 1539 aa13.97□□□□□ -0.17
ATRX-214ENST00000624166 DCTN1Q14203 1278 aa13.97□□□□□ -0.17
ATRX-214ENST00000624166 CAMK4Q16566 473 aa13.97□□□□□ -0.17
ATRX-214ENST00000624166 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
ATRX-214ENST00000624166 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.17
ATRX-214ENST00000624166 FEZ1Q99689 392 aa13.96□□□□□ -0.17
ATRX-214ENST00000624166 FYB1O15117 783 aa13.96□□□□□ -0.17
ATRX-214ENST00000624166 CTAGE5O15320 804 aa13.96□□□□□ -0.17
ATRX-214ENST00000624166 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
ATRX-214ENST00000624166 PIBF1Q8WXW3 757 aa13.96□□□□□ -0.17
ATRX-214ENST00000624166 UBXN4Q92575 508 aa13.96□□□□□ -0.17
ATRX-214ENST00000624166 FOSBP53539 338 aa13.96□□□□□ -0.18
ATRX-214ENST00000624166 FAM200AQ8TCP9 573 aa13.96□□□□□ -0.18
ATRX-214ENST00000624166 KIF20AO95235 890 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 STK38Q15208 465 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 FERMT3Q86UX7 667 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 NUTM1Q86Y26 1132 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 ME1P48163 572 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 ANKRD20A12PQ8NF67 263 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
ATRX-214ENST00000624166 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 LEKR1Q6ZMV7 388 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 ANO10Q9NW15 660 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
ATRX-214ENST00000624166 TRDNQ13061 729 aa13.95□□□□□ -0.18
ATRX-214ENST00000624166 TMCO3Q6UWJ1 677 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 PLCH2O75038 1416 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 CBFA2T2O43439 604 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 DHX16O60231 1041 aaKnown RBP13.94□□□□□ -0.18
ATRX-214ENST00000624166 KDM4AO75164 1064 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
ATRX-214ENST00000624166 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 GJB2P29033 226 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 STK3Q13188 491 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 MCM10Q7L590 875 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
ATRX-214ENST00000624166 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
ATRX-214ENST00000624166 ZNF165P49910 485 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 PRPF40BQ6NWY9 871 aaKnown RBP13.93□□□□□ -0.18
ATRX-214ENST00000624166 KRT222Q8N1A0 295 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 CCDC171Q6TFL3 1326 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 WDR7Q9Y4E6 1490 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 GSDMDP57764 484 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 CNPY2Q9Y2B0 182 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 SYNMO15061 1565 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 SMTNL1A8MU46 457 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 IPO7O95373 1038 aaKnown RBP13.93□□□□□ -0.18
ATRX-214ENST00000624166 MEIS3Q99687 375 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 SFPQP23246 707 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATRX-214ENST00000624166 CEP85Q6P2H3 762 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 CKAP2LQ8IYA6 745 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 PDILTQ8N807 584 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 JMYQ8N9B5 988 aa13.93□□□□□ -0.18
ATRX-214ENST00000624166 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
ATRX-214ENST00000624166 ERICH4A6NGS2 130 aa13.92□□□□□ -0.18
ATRX-214ENST00000624166 RALYLQ86SE5 291 aaKnown RBP13.92□□□□□ -0.18
ATRX-214ENST00000624166 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
ATRX-214ENST00000624166 F6X3S4 739 aa13.92□□□□□ -0.18
ATRX-214ENST00000624166 F13A1P00488 732 aa13.92□□□□□ -0.18
ATRX-214ENST00000624166 CEP135Q66GS9 1140 aa13.92□□□□□ -0.18
ATRX-214ENST00000624166 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
ATRX-214ENST00000624166 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
ATRX-214ENST00000624166 SERPINC1P01008 464 aa13.92□□□□□ -0.18
ATRX-214ENST00000624166 C8orf58Q8NAV2 365 aa13.92□□□□□ -0.18
ATRX-214ENST00000624166 MAST1Q9Y2H9 1570 aa13.91□□□□□ -0.18
ATRX-214ENST00000624166 BMS1Q14692 1282 aaKnown RBP13.91□□□□□ -0.18
ATRX-214ENST00000624166 CCDC186Q7Z3E2 898 aa13.91□□□□□ -0.18
ATRX-214ENST00000624166 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
ATRX-214ENST00000624166 TMEM63CQ9P1W3 806 aa13.91□□□□□ -0.18
ATRX-214ENST00000624166 ARHGEF5Q12774 1597 aa13.91□□□□□ -0.18
ATRX-214ENST00000624166 SAFBQ15424 915 aaKnown RBP eCLIP13.91□□□□□ -0.18
ATRX-214ENST00000624166 AACSQ86V21 672 aa13.91□□□□□ -0.18
ATRX-214ENST00000624166 OGFRQ9NZT2 677 aa13.91□□□□□ -0.18
ATRX-214ENST00000624166 LRRFIP2Q9Y608 721 aaKnown RBP13.9□□□□□ -0.18
ATRX-214ENST00000624166 TSPYL6Q8N831 410 aa13.9□□□□□ -0.18
ATRX-214ENST00000624166 PTPRTO14522 1441 aa13.9□□□□□ -0.18
ATRX-214ENST00000624166 ERLIN1O75477 346 aa13.9□□□□□ -0.18
ATRX-214ENST00000624166 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
ATRX-214ENST00000624166 AKAP17AQ02040 695 aaKnown RBP13.9□□□□□ -0.18
ATRX-214ENST00000624166 ZFYVE9O95405 1425 aa13.9□□□□□ -0.18
ATRX-214ENST00000624166 SBNO2Q9Y2G9 1366 aa13.9□□□□□ -0.18
ATRX-214ENST00000624166 ADGRL1O94910 1474 aa13.9□□□□□ -0.18
ATRX-214ENST00000624166 POLR1AO95602 1720 aaPredicted RBP13.89□□□□□ -0.19
ATRX-214ENST00000624166 FLIIQ13045 1269 aa13.89□□□□□ -0.19
ATRX-214ENST00000624166 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
ATRX-214ENST00000624166 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
ATRX-214ENST00000624166 NLRP6P59044 892 aa13.89□□□□□ -0.19
ATRX-214ENST00000624166 NUDT16Q96DE0 195 aaKnown RBP13.89□□□□□ -0.19
ATRX-214ENST00000624166 TIGD1Q96MW7 591 aa13.89□□□□□ -0.19
ATRX-214ENST00000624166 CSB-PGBD3P0DP91 1061 aa13.89□□□□□ -0.19
ATRX-214ENST00000624166 STX1AQ16623 288 aa13.89□□□□□ -0.19
ATRX-214ENST00000624166 NME9Q86XW9 330 aa13.89□□□□□ -0.19
ATRX-214ENST00000624166 PES1O00541 588 aaKnown RBP13.88□□□□□ -0.19
ATRX-214ENST00000624166 KDM5AP29375 1690 aaKnown RBP13.88□□□□□ -0.19
ATRX-214ENST00000624166 TRAPPC8Q9Y2L5 1435 aa13.88□□□□□ -0.19
ATRX-214ENST00000624166 BRD1O95696 1058 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms