RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
LINC00963-217ENST00000624009 COL5A3P25940 1745 aaPredicted RBP16.69■□□□□ 0.26
LINC00963-217ENST00000624009 ZBTB7AO95365 584 aa16.68■□□□□ 0.26
LINC00963-217ENST00000624009 KCNQ4P56696 695 aa16.68■□□□□ 0.26
LINC00963-217ENST00000624009 RALBP1Q15311 655 aa16.68■□□□□ 0.26
LINC00963-217ENST00000624009 GAS2L2Q8NHY3 880 aa16.68■□□□□ 0.26
LINC00963-217ENST00000624009 PPP1R1BQ9UD71 204 aaPredicted RBP16.68■□□□□ 0.26
LINC00963-217ENST00000624009 MAP3K5Q99683 1374 aa16.67■□□□□ 0.26
LINC00963-217ENST00000624009 U2SURPO15042 1029 aaKnown RBP16.67■□□□□ 0.26
LINC00963-217ENST00000624009 FCHSD2O94868 740 aa16.67■□□□□ 0.26
LINC00963-217ENST00000624009 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
LINC00963-217ENST00000624009 MYH14Q7Z406 1995 aaKnown RBP16.66■□□□□ 0.26
LINC00963-217ENST00000624009 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
LINC00963-217ENST00000624009 SIPA1L3O60292 1781 aaPredicted RBP16.65■□□□□ 0.26
LINC00963-217ENST00000624009 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
LINC00963-217ENST00000624009 SSFA2P28290 1259 aa16.65■□□□□ 0.26
LINC00963-217ENST00000624009 ATP6V1AP38606 617 aa16.65■□□□□ 0.26
LINC00963-217ENST00000624009 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
LINC00963-217ENST00000624009 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
LINC00963-217ENST00000624009 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
LINC00963-217ENST00000624009 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
LINC00963-217ENST00000624009 AK7Q96M32 723 aa16.64■□□□□ 0.25
LINC00963-217ENST00000624009 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
LINC00963-217ENST00000624009 UBR2Q8IWV8 1755 aa16.64■□□□□ 0.25
LINC00963-217ENST00000624009 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
LINC00963-217ENST00000624009 POLD1P28340 1107 aa16.63■□□□□ 0.25
LINC00963-217ENST00000624009 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
LINC00963-217ENST00000624009 CNTNAP4Q9C0A0 1308 aa16.63■□□□□ 0.25
LINC00963-217ENST00000624009 UTRNP46939 3433 aa16.62■□□□□ 0.25
LINC00963-217ENST00000624009 U2AF1L5P0DN76 240 aaPredicted RBP16.62■□□□□ 0.25
LINC00963-217ENST00000624009 U2AF1Q01081 240 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC00963-217ENST00000624009 ITPK1Q13572 414 aa16.62■□□□□ 0.25
LINC00963-217ENST00000624009 LINC00116Q8NCU8 138 aa16.62■□□□□ 0.25
LINC00963-217ENST00000624009 CEMIPQ8WUJ3 1361 aa16.62■□□□□ 0.25
LINC00963-217ENST00000624009 ADRA2BP18089 450 aa16.61■□□□□ 0.25
LINC00963-217ENST00000624009 PRKAR2BP31323 418 aa16.61■□□□□ 0.25
LINC00963-217ENST00000624009 SLC4A9Q96Q91 983 aa16.61■□□□□ 0.25
LINC00963-217ENST00000624009 ARXQ96QS3 562 aa16.61■□□□□ 0.25
LINC00963-217ENST00000624009 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
LINC00963-217ENST00000624009 TJP1Q07157 1748 aa16.61■□□□□ 0.25
LINC00963-217ENST00000624009 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
LINC00963-217ENST00000624009 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
LINC00963-217ENST00000624009 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
LINC00963-217ENST00000624009 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
LINC00963-217ENST00000624009 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
LINC00963-217ENST00000624009 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
LINC00963-217ENST00000624009 DLG5Q8TDM6 1919 aa16.58■□□□□ 0.25
LINC00963-217ENST00000624009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.24
LINC00963-217ENST00000624009 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.24
LINC00963-217ENST00000624009 KCPQ6ZWJ8 1503 aa16.58■□□□□ 0.24
LINC00963-217ENST00000624009 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
LINC00963-217ENST00000624009 GNPATO15228 680 aa16.57■□□□□ 0.24
LINC00963-217ENST00000624009 SYT17Q9BSW7 474 aa16.57■□□□□ 0.24
LINC00963-217ENST00000624009 RTCBQ9Y3I0 505 aaKnown RBP16.57■□□□□ 0.24
LINC00963-217ENST00000624009 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
LINC00963-217ENST00000624009 RPS6KA4O75676 772 aa16.56■□□□□ 0.24
LINC00963-217ENST00000624009 NEFMP07197 916 aa16.56■□□□□ 0.24
LINC00963-217ENST00000624009 TEFQ10587 303 aa16.56■□□□□ 0.24
LINC00963-217ENST00000624009 IL17REQ8NFR9 667 aa16.56■□□□□ 0.24
LINC00963-217ENST00000624009 FHDC1Q9C0D6 1143 aaPredicted RBP16.56■□□□□ 0.24
LINC00963-217ENST00000624009 MSH5O43196 834 aa16.55■□□□□ 0.24
LINC00963-217ENST00000624009 PTCD1O75127 700 aaKnown RBP16.55■□□□□ 0.24
LINC00963-217ENST00000624009 AMIGO3Q86WK7 504 aa16.55■□□□□ 0.24
LINC00963-217ENST00000624009 C4AP0C0L4 1744 aa16.55■□□□□ 0.24
LINC00963-217ENST00000624009 CHD4Q14839 1912 aa16.55■□□□□ 0.24
LINC00963-217ENST00000624009 TRAPPC3LQ5T215 181 aa16.54■□□□□ 0.24
LINC00963-217ENST00000624009 CRKLP46109 303 aaKnown RBP16.53■□□□□ 0.24
LINC00963-217ENST00000624009 ZNF790Q6PG37 636 aa16.53■□□□□ 0.24
LINC00963-217ENST00000624009 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
LINC00963-217ENST00000624009 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
LINC00963-217ENST00000624009 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
LINC00963-217ENST00000624009 PHF14O94880 888 aa16.52■□□□□ 0.24
LINC00963-217ENST00000624009 TEX13AQ9BXU3 409 aaPredicted RBP16.52■□□□□ 0.24
LINC00963-217ENST00000624009 SLC39A6Q13433 755 aa16.51■□□□□ 0.23
LINC00963-217ENST00000624009 NLGN1Q8N2Q7 840 aa16.51■□□□□ 0.23
LINC00963-217ENST00000624009 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
LINC00963-217ENST00000624009 CD2APQ9Y5K6 639 aa16.51■□□□□ 0.23
LINC00963-217ENST00000624009 KIF13BQ9NQT8 1826 aa16.51■□□□□ 0.23
LINC00963-217ENST00000624009 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
LINC00963-217ENST00000624009 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
LINC00963-217ENST00000624009 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
LINC00963-217ENST00000624009 HEG1Q9ULI3 1381 aa16.5■□□□□ 0.23
LINC00963-217ENST00000624009 STARD3NLO95772 234 aa16.49■□□□□ 0.23
LINC00963-217ENST00000624009 RFC4P35249 363 aa16.49■□□□□ 0.23
LINC00963-217ENST00000624009 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
LINC00963-217ENST00000624009 DNAJC10Q8IXB1 793 aa16.49■□□□□ 0.23
LINC00963-217ENST00000624009 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
LINC00963-217ENST00000624009 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
LINC00963-217ENST00000624009 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
LINC00963-217ENST00000624009 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
LINC00963-217ENST00000624009 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
LINC00963-217ENST00000624009 BTBD11A6QL63 1104 aa16.47■□□□□ 0.23
LINC00963-217ENST00000624009 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
LINC00963-217ENST00000624009 USP42Q9H9J4 1324 aaKnown RBP16.46■□□□□ 0.23
LINC00963-217ENST00000624009 KDM3BQ7LBC6 1761 aa16.46■□□□□ 0.23
LINC00963-217ENST00000624009 GYS1P13807 737 aa16.46■□□□□ 0.23
LINC00963-217ENST00000624009 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
LINC00963-217ENST00000624009 TAF7Q15545 349 aaPredicted RBP16.45■□□□□ 0.22
LINC00963-217ENST00000624009 MCM10Q7L590 875 aa16.45■□□□□ 0.22
LINC00963-217ENST00000624009 COL15A1P39059 1388 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms