RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 MIS18AQ9NYP9 233 aa10.46□□□□□ -0.73
PCDH15-233ENST00000621708 RAD21O60216 631 aa10.46□□□□□ -0.73
PCDH15-233ENST00000621708 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.74
PCDH15-233ENST00000621708 HSP90AB2PQ58FF8 381 aa10.46□□□□□ -0.74
PCDH15-233ENST00000621708 BICD2Q8TD16 824 aa10.46□□□□□ -0.74
PCDH15-233ENST00000621708 ZSCAN31Q96LW9 406 aaPredicted RBP10.46□□□□□ -0.74
PCDH15-233ENST00000621708 IFIT5Q13325 482 aaKnown RBP10.45□□□□□ -0.74
PCDH15-233ENST00000621708 METTL24Q5JXM2 366 aa10.45□□□□□ -0.74
PCDH15-233ENST00000621708 IL2RBP14784 551 aa10.45□□□□□ -0.74
PCDH15-233ENST00000621708 MAP3K5Q99683 1374 aa10.45□□□□□ -0.74
PCDH15-233ENST00000621708 ANKRD18BA2A2Z9 1011 aa10.45□□□□□ -0.74
PCDH15-233ENST00000621708 MX1P20591 662 aa10.45□□□□□ -0.74
PCDH15-233ENST00000621708 NEK4P51957 841 aa10.45□□□□□ -0.74
PCDH15-233ENST00000621708 CAVIN4Q5BKX8 364 aa10.45□□□□□ -0.74
PCDH15-233ENST00000621708 PPP1R42Q7Z4L9 355 aa10.45□□□□□ -0.74
PCDH15-233ENST00000621708 CWC25Q9NXE8 425 aaPredicted RBP10.45□□□□□ -0.74
PCDH15-233ENST00000621708 KDM5AP29375 1690 aaKnown RBP10.44□□□□□ -0.74
PCDH15-233ENST00000621708 PLEKHG3A1L390 1219 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 ALDH1L1O75891 902 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 LETM1O95202 739 aaPredicted RBP10.44□□□□□ -0.74
PCDH15-233ENST00000621708 GCP02774 474 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 CDKL5O76039 1030 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 ZNF396Q96N95 335 aaPredicted RBP10.44□□□□□ -0.74
PCDH15-233ENST00000621708 ZNF287Q9HBT7 754 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 PTPRTO14522 1441 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 TET3O43151 1660 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 SLC5A1P13866 664 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 LMTK3Q96Q04 1460 aa10.44□□□□□ -0.74
PCDH15-233ENST00000621708 MBD3O95983 291 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 TRIM27P14373 513 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 TRMT112Q9UI30 125 aaKnown RBP10.43□□□□□ -0.74
PCDH15-233ENST00000621708 PCDH11XQ9BZA7 1347 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 PCDH11YQ9BZA8 1340 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 CHRNA2Q15822 529 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 CDC5LQ99459 802 aaKnown RBP10.43□□□□□ -0.74
PCDH15-233ENST00000621708 ARHGAP31Q2M1Z3 1444 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 HOXC9P31274 260 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 DCAF5Q96JK2 942 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 ERVK-7P63135 1459 aa10.43□□□□□ -0.74
PCDH15-233ENST00000621708 SLF2Q8IX21 1173 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 AK7Q96M32 723 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 CLASP1Q7Z460 1538 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 CCDC43Q96MW1 224 aaKnown RBP10.42□□□□□ -0.74
PCDH15-233ENST00000621708 KIF1BO60333 1816 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 FKBP4Q02790 459 aaKnown RBP eCLIP10.42□□□□□ -0.74
PCDH15-233ENST00000621708 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 JMYQ8N9B5 988 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 MAP3K2Q9Y2U5 619 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 SASS6Q6UVJ0 657 aa10.42□□□□□ -0.74
PCDH15-233ENST00000621708 LRP2BPQ9P2M1 347 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
PCDH15-233ENST00000621708 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 DDB1Q16531 1140 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 TMOD2Q9NZR1 351 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 RAI14Q9P0K7 980 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 CIZ1Q9ULV3 898 aaPredicted RBP10.41□□□□□ -0.74
PCDH15-233ENST00000621708 CCDC69A6NI79 296 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 IMMTQ16891 758 aaKnown RBP10.41□□□□□ -0.74
PCDH15-233ENST00000621708 CDC42BPAQ5VT25 1732 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 TTF1Q15361 905 aaPredicted RBP10.41□□□□□ -0.74
PCDH15-233ENST00000621708 WASF1Q92558 559 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 LRRFIP2Q9Y608 721 aaKnown RBP10.41□□□□□ -0.74
PCDH15-233ENST00000621708 UGGT1Q9NYU2 1555 aa10.41□□□□□ -0.74
PCDH15-233ENST00000621708 NAT10Q9H0A0 1025 aaKnown RBP10.4□□□□□ -0.74
PCDH15-233ENST00000621708 IL1RAPL2Q9NP60 686 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 IQGAP3Q86VI3 1631 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 HSPA2P54652 639 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 BICDL1Q6ZP65 573 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 RPGRQ92834 1020 aaKnown RBP10.4□□□□□ -0.74
PCDH15-233ENST00000621708 EXOC6BQ9Y2D4 811 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 MAP3K19Q56UN5 1328 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 KDM5CP41229 1560 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.74
PCDH15-233ENST00000621708 HOXB7P09629 217 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 ANKRD13DQ6ZTN6 518 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 AIDAQ96BJ3 306 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 U3KPZ7 1027 aaPredicted RBP10.4□□□□□ -0.74
PCDH15-233ENST00000621708 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 ABCC3O15438 1527 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 TDO2P48775 406 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 MAP3K12Q12852 859 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 CEP89Q96ST8 783 aa10.4□□□□□ -0.74
PCDH15-233ENST00000621708 WDR33Q9C0J8 1336 aaKnown RBP10.4□□□□□ -0.74
PCDH15-233ENST00000621708 TXLNAP40222 546 aa10.4□□□□□ -0.75
PCDH15-233ENST00000621708 HMGB1P09429 215 aaKnown RBP10.39□□□□□ -0.75
PCDH15-233ENST00000621708 IKQ13123 557 aaPredicted RBP10.39□□□□□ -0.75
PCDH15-233ENST00000621708 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
PCDH15-233ENST00000621708 GSE1Q14687 1217 aa10.39□□□□□ -0.75
PCDH15-233ENST00000621708 MTHFSDQ2M296 383 aaKnown RBP10.39□□□□□ -0.75
PCDH15-233ENST00000621708 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
PCDH15-233ENST00000621708 NPHP4O75161 1426 aaPredicted RBP10.39□□□□□ -0.75
PCDH15-233ENST00000621708 KSR2Q6VAB6 950 aa10.39□□□□□ -0.75
PCDH15-233ENST00000621708 EYA1Q99502 592 aa10.39□□□□□ -0.75
PCDH15-233ENST00000621708 UBAC1Q9BSL1 405 aa10.39□□□□□ -0.75
PCDH15-233ENST00000621708 CREBRFQ8IUR6 639 aa10.38□□□□□ -0.75
PCDH15-233ENST00000621708 RSPH6AQ9H0K4 717 aa10.38□□□□□ -0.75
PCDH15-233ENST00000621708 PDRG1Q9NUG6 133 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 251.4 ms