RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 ROBO1Q9Y6N7 1651 aa35.17■■■■□ 3.22
FMR1-219ENST00000621453 PKD1L3Q7Z443 1732 aa35.16■■■■□ 3.22
FMR1-219ENST00000621453 WDR17Q8IZU2 1322 aa35.16■■■■□ 3.22
FMR1-219ENST00000621453 BACH2Q9BYV9 841 aa35.16■■■■□ 3.22
FMR1-219ENST00000621453 COL5A2P05997 1499 aaPredicted RBP35.15■■■■□ 3.22
FMR1-219ENST00000621453 G2E3Q7L622 706 aa35.15■■■■□ 3.22
FMR1-219ENST00000621453 SCN11AQ9UI33 1791 aa35.15■■■■□ 3.22
FMR1-219ENST00000621453 HOXB7P09629 217 aa35.13■■■■□ 3.21
FMR1-219ENST00000621453 PHKG2P15735 406 aa35.13■■■■□ 3.21
FMR1-219ENST00000621453 PDZRN3Q9UPQ7 1066 aa35.12■■■■□ 3.21
FMR1-219ENST00000621453 KCNQ3O43525 872 aa35.11■■■■□ 3.21
FMR1-219ENST00000621453 HDGFL1Q5TGJ6 251 aa35.11■■■■□ 3.21
FMR1-219ENST00000621453 IFNL2Q8IZJ0 200 aa35.11■■■■□ 3.21
FMR1-219ENST00000621453 NECTIN2Q92692 538 aa35.11■■■■□ 3.21
FMR1-219ENST00000621453 AHDC1Q5TGY3 1603 aaPredicted RBP35.1■■■■□ 3.21
FMR1-219ENST00000621453 TOM1L2Q6ZVM7 507 aa35.09■■■■□ 3.21
FMR1-219ENST00000621453 PARP4Q9UKK3 1724 aaKnown RBP35.09■■■■□ 3.21
FMR1-219ENST00000621453 FLIIQ13045 1269 aa35.09■■■■□ 3.21
FMR1-219ENST00000621453 KDM6AO15550 1401 aaPredicted RBP35.09■■■■□ 3.21
FMR1-219ENST00000621453 CHMP4AQ9BY43 222 aa35.08■■■■□ 3.21
FMR1-219ENST00000621453 C1orf115Q9H7X2 142 aa35.08■■■■□ 3.21
FMR1-219ENST00000621453 SMC5Q8IY18 1101 aa35.07■■■■□ 3.21
FMR1-219ENST00000621453 CYP27B1O15528 508 aa35.03■■■■□ 3.2
FMR1-219ENST00000621453 FKBP5Q13451 457 aaPredicted RBP35.03■■■■□ 3.2
FMR1-219ENST00000621453 F6X3S4 739 aa35.03■■■■□ 3.2
FMR1-219ENST00000621453 CCT4P50991 539 aaKnown RBP35.03■■■■□ 3.2
FMR1-219ENST00000621453 FAM161AQ3B820 660 aa35.03■■■■□ 3.2
FMR1-219ENST00000621453 SLC52A2Q9HAB3 445 aa35.03■■■■□ 3.2
FMR1-219ENST00000621453 EIF2S2P20042 333 aaKnown RBP35.02■■■■□ 3.2
FMR1-219ENST00000621453 HEG1Q9ULI3 1381 aa35.01■■■■□ 3.2
FMR1-219ENST00000621453 DCAF5Q96JK2 942 aa35.01■■■■□ 3.2
FMR1-219ENST00000621453 CARD10Q9BWT7 1032 aa35.01■■■■□ 3.2
FMR1-219ENST00000621453 HSP90AB1P08238 724 aaKnown RBP35.01■■■■□ 3.19
FMR1-219ENST00000621453 SLC4A10Q6U841 1118 aa35.01■■■■□ 3.19
FMR1-219ENST00000621453 COL22A1Q8NFW1 1626 aaPredicted RBP34.99■■■■□ 3.19
FMR1-219ENST00000621453 EVA1CP58658 441 aa34.99■■■■□ 3.19
FMR1-219ENST00000621453 STRN4Q9NRL3 753 aa34.99■■■■□ 3.19
FMR1-219ENST00000621453 MRC1P22897 1456 aa34.99■■■■□ 3.19
FMR1-219ENST00000621453 C8orf34Q49A92 452 aa34.98■■■■□ 3.19
FMR1-219ENST00000621453 N4BP2Q86UW6 1770 aaPredicted RBP34.98■■■■□ 3.19
FMR1-219ENST00000621453 GIGYF1O75420 1035 aaPredicted RBP34.97■■■■□ 3.19
FMR1-219ENST00000621453 SIRT2Q8IXJ6 389 aa34.97■■■■□ 3.19
FMR1-219ENST00000621453 LARP1Q6PKG0 1096 aaKnown RBP34.97■■■■□ 3.19
FMR1-219ENST00000621453 GCC1Q96CN9 775 aa34.96■■■■□ 3.19
FMR1-219ENST00000621453 PXDNLA1KZ92 1463 aa34.96■■■■□ 3.19
FMR1-219ENST00000621453 NFATC2IPQ8NCF5 419 aa34.95■■■■□ 3.19
FMR1-219ENST00000621453 MEIS3Q99687 375 aa34.95■■■■□ 3.19
FMR1-219ENST00000621453 PHAXQ9H814 394 aaKnown RBP34.95■■■■□ 3.19
FMR1-219ENST00000621453 CHPF2Q9P2E5 772 aa34.95■■■■□ 3.19
FMR1-219ENST00000621453 IL2RBP14784 551 aa34.95■■■■□ 3.18
FMR1-219ENST00000621453 ZCRB1Q8TBF4 217 aaKnown RBP34.95■■■■□ 3.18
FMR1-219ENST00000621453 PCDH11XQ9BZA7 1347 aa34.94■■■■□ 3.18
FMR1-219ENST00000621453 PCDH11YQ9BZA8 1340 aa34.94■■■■□ 3.18
FMR1-219ENST00000621453 ZNF790Q6PG37 636 aa34.94■■■■□ 3.18
FMR1-219ENST00000621453 COL14A1Q05707 1796 aaKnown RBP34.93■■■■□ 3.18
FMR1-219ENST00000621453 ATP10DQ9P241 1426 aa34.93■■■■□ 3.18
FMR1-219ENST00000621453 NUCB1Q02818 461 aa34.92■■■■□ 3.18
FMR1-219ENST00000621453 SLC39A6Q13433 755 aa34.9■■■■□ 3.18
FMR1-219ENST00000621453 RPAP2Q8IXW5 612 aaPredicted RBP34.9■■■■□ 3.18
FMR1-219ENST00000621453 ANKRD44Q8N8A2 993 aa34.9■■■■□ 3.18
FMR1-219ENST00000621453 DBF4Q9UBU7 674 aaPredicted RBP34.9■■■■□ 3.18
FMR1-219ENST00000621453 BTG4Q9NY30 223 aa34.9■■■■□ 3.18
FMR1-219ENST00000621453 PHLPP1O60346 1717 aa34.89■■■■□ 3.18
FMR1-219ENST00000621453 SHANK3Q9BYB0 1731 aa34.88■■■■□ 3.17
FMR1-219ENST00000621453 CEP85Q6P2H3 762 aa34.88■■■■□ 3.17
FMR1-219ENST00000621453 COL16A1Q07092 1604 aaPredicted RBP34.87■■■■□ 3.17
FMR1-219ENST00000621453 ANP32AP39687 249 aaKnown RBP34.87■■■■□ 3.17
FMR1-219ENST00000621453 PRAMEF22A3QJZ6 481 aa34.86■■■■□ 3.17
FMR1-219ENST00000621453 CHD1LQ86WJ1 897 aa34.86■■■■□ 3.17
FMR1-219ENST00000621453 CABP4P57796 275 aa34.86■■■■□ 3.17
FMR1-219ENST00000621453 C5P01031 1676 aa34.85■■■■□ 3.17
FMR1-219ENST00000621453 ANXA1P04083 346 aa34.84■■■■□ 3.17
FMR1-219ENST00000621453 TTC5Q8N0Z6 440 aa34.83■■■■□ 3.17
FMR1-219ENST00000621453 LNPKQ9C0E8 428 aa34.83■■■■□ 3.17
FMR1-219ENST00000621453 GNAI3P08754 354 aa34.82■■■■□ 3.17
FMR1-219ENST00000621453 ANKRD45Q5TZF3 282 aa34.82■■■■□ 3.17
FMR1-219ENST00000621453 NKX1-1Q15270 411 aaPredicted RBP34.82■■■■□ 3.16
FMR1-219ENST00000621453 DCTPP1Q9H773 170 aa34.81■■■■□ 3.16
FMR1-219ENST00000621453 TOM1O60784 492 aa34.8■■■■□ 3.16
FMR1-219ENST00000621453 GNAI2P04899 355 aa34.8■■■■□ 3.16
FMR1-219ENST00000621453 ZNF496Q96IT1 587 aaPredicted RBP34.8■■■■□ 3.16
FMR1-219ENST00000621453 USP35Q9P2H5 1018 aa34.8■■■■□ 3.16
FMR1-219ENST00000621453 NPM2Q86SE8 214 aaKnown RBP34.8■■■■□ 3.16
FMR1-219ENST00000621453 DNAAF4Q8WXU2 420 aa34.79■■■■□ 3.16
FMR1-219ENST00000621453 HYPKQ9NX55 129 aa34.79■■■■□ 3.16
FMR1-219ENST00000621453 PI4KAP2A4QPH2 592 aa34.78■■■■□ 3.16
FMR1-219ENST00000621453 ERVV-2B6SEH9 535 aa34.78■■■■□ 3.16
FMR1-219ENST00000621453 PROSER3Q2NL68 480 aa34.78■■■■□ 3.16
FMR1-219ENST00000621453 PI4KAP1Q8N8J0 262 aa34.78■■■■□ 3.16
FMR1-219ENST00000621453 SRCIN1Q9C0H9 1055 aa34.78■■■■□ 3.16
FMR1-219ENST00000621453 DDX21Q9NR30 783 aaKnown RBP eCLIP34.78■■■■□ 3.16
FMR1-219ENST00000621453 DDX54Q8TDD1 881 aaKnown RBP34.77■■■■□ 3.16
FMR1-219ENST00000621453 FMNL2Q96PY5 1086 aa34.77■■■■□ 3.16
FMR1-219ENST00000621453 ADCY9O60503 1353 aa34.76■■■■□ 3.16
FMR1-219ENST00000621453 HMMRO75330 724 aa34.75■■■■□ 3.15
FMR1-219ENST00000621453 SNRPA1P09661 255 aaKnown RBP34.75■■■■□ 3.15
FMR1-219ENST00000621453 USP44Q9H0E7 712 aa34.74■■■■□ 3.15
FMR1-219ENST00000621453 PDIA6Q15084 440 aa34.73■■■■□ 3.15
FMR1-219ENST00000621453 BEND3Q5T5X7 828 aa34.73■■■■□ 3.15
FMR1-219ENST00000621453 PLCH1Q4KWH8 1693 aa34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms