RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 GPTP24298 496 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 PDE3AQ14432 1141 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 IMMTQ16891 758 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 PPP1R42Q7Z4L9 355 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 NASPP49321 788 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 MAP3K12Q12852 859 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 STK3Q13188 491 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 DNAI2Q9GZS0 605 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 MTERF4Q7Z6M4 381 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 MAP3K1Q13233 1512 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 FANCAO15360 1455 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 BCAR3O75815 825 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 PIBF1Q8WXW3 757 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 RUFY1Q96T51 708 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 MINDY4BA8MYZ0 360 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 IL1RAPL2Q9NP60 686 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 NBPF6Q5VWK0 638 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 ZNF444Q8N0Y2 327 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 NBPF4Q96M43 638 aa11.55□□□□□ -0.56
CLTCL1-211ENST00000621271 CEBPZQ03701 1054 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 CCDC96Q2M329 555 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 BLOC1S2Q6QNY1 142 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 WASF1Q92558 559 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 SMARCE1Q969G3 411 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 TANGO6Q9C0B7 1094 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 ZBTB3Q9H5J0 574 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 FAM135AQ9P2D6 1515 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 LDHCP07864 332 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 BRPF1P55201 1214 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 KRT32Q14532 448 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 MYO6Q9UM54 1294 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 CDK13Q14004 1512 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 HYPKQ9NX55 129 aa11.54□□□□□ -0.56
CLTCL1-211ENST00000621271 RABEP1Q15276 862 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 ANKRD24Q8TF21 1146 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 SMARCC1Q92922 1105 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 TIAM1Q13009 1591 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 NEBLO76041 1014 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 DDB1Q16531 1140 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 CUL5Q93034 780 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 ATP10BO94823 1461 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 RPAP2Q8IXW5 612 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 CAGE1Q8TC20 777 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 NAPBQ9H115 298 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 CABP5Q9NP86 173 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 ZNHIT6Q9NWK9 470 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
CLTCL1-211ENST00000621271 ZNF771Q7L3S4 317 aaPredicted RBP11.52□□□□□ -0.56
CLTCL1-211ENST00000621271 KIAA0556O60303 1618 aa11.52□□□□□ -0.56
CLTCL1-211ENST00000621271 CCDC184Q52MB2 194 aa11.52□□□□□ -0.57
CLTCL1-211ENST00000621271 HSPA2P54652 639 aa11.52□□□□□ -0.57
CLTCL1-211ENST00000621271 CWC27Q6UX04 472 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-211ENST00000621271 LUC7LQ9NQ29 371 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-211ENST00000621271 LMTK3Q96Q04 1460 aa11.52□□□□□ -0.57
CLTCL1-211ENST00000621271 KIF1BPQ96EK5 621 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 ACSBG1Q96GR2 724 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 EHMT1Q9H9B1 1298 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 CCDC39Q9UFE4 941 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 DACH1Q9UI36 760 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 HDAC9Q9UKV0 1011 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 EMILIN1Q9Y6C2 1016 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 SUPT6HQ7KZ85 1726 aaKnown RBP11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 ME1P48163 572 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 TTLL5Q6EMB2 1281 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 AEBP1Q8IUX7 1158 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 HLA-DOAP06340 250 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 OGFOD1Q8N543 542 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 MNS1Q8NEH6 495 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 TTC21BQ7Z4L5 1316 aa11.51□□□□□ -0.57
CLTCL1-211ENST00000621271 BAG3O95817 575 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 NF2P35240 595 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 DCTN1Q14203 1278 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 CTCFLQ8NI51 663 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 SETDB2Q96T68 719 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 SMC2O95347 1197 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 ZCRB1Q8TBF4 217 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 PKNOX2Q96KN3 472 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 MPHOSPH6Q99547 160 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 THUMPD2Q9BTF0 503 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 IFT57Q9NWB7 429 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 ATP6V1AP38606 617 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 KIF14Q15058 1648 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 LRRC59Q96AG4 307 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 FIBPO43427 364 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 RANBP6O60518 1105 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 MVPQ14764 893 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 SPTY2D1Q68D10 685 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 DNAAF4Q8WXU2 420 aa11.5□□□□□ -0.57
CLTCL1-211ENST00000621271 NAIPQ13075 1403 aa11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 LETM1O95202 739 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 LDHAL6AQ6ZMR3 332 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms