RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 SMIM5Q71RC9 77 aa27.74■■■□□ 2.03
SMC6-210ENST00000621152 RBM42Q9BTD8 480 aaKnown RBP27.73■■■□□ 2.03
SMC6-210ENST00000621152 TUBGCP6Q96RT7 1819 aa27.72■■■□□ 2.03
SMC6-210ENST00000621152 PHF14O94880 888 aa27.72■■■□□ 2.03
SMC6-210ENST00000621152 YY1P25490 414 aa27.72■■■□□ 2.03
SMC6-210ENST00000621152 AMIGO3Q86WK7 504 aa27.72■■■□□ 2.03
SMC6-210ENST00000621152 NFATC2IPQ8NCF5 419 aa27.72■■■□□ 2.03
SMC6-210ENST00000621152 C5P01031 1676 aa27.72■■■□□ 2.03
SMC6-210ENST00000621152 KDM6AO15550 1401 aaPredicted RBP27.7■■■□□ 2.03
SMC6-210ENST00000621152 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.7■■■□□ 2.02
SMC6-210ENST00000621152 AKAP4Q5JQC9 854 aa27.69■■■□□ 2.02
SMC6-210ENST00000621152 MAP3K5Q99683 1374 aa27.69■■■□□ 2.02
SMC6-210ENST00000621152 SLC4A9Q96Q91 983 aa27.68■■■□□ 2.02
SMC6-210ENST00000621152 C4BP0C0L5 1744 aa27.67■■■□□ 2.02
SMC6-210ENST00000621152 TAF1LQ8IZX4 1826 aa27.67■■■□□ 2.02
SMC6-210ENST00000621152 GNPATO15228 680 aa27.67■■■□□ 2.02
SMC6-210ENST00000621152 U2SURPO15042 1029 aaKnown RBP27.66■■■□□ 2.02
SMC6-210ENST00000621152 SSFA2P28290 1259 aa27.66■■■□□ 2.02
SMC6-210ENST00000621152 LGR6Q9HBX8 967 aa27.66■■■□□ 2.02
SMC6-210ENST00000621152 MTHFSDQ2M296 383 aaKnown RBP27.65■■■□□ 2.02
SMC6-210ENST00000621152 PTCD1O75127 700 aaKnown RBP27.64■■■□□ 2.02
SMC6-210ENST00000621152 GPR162Q16538 588 aa27.64■■■□□ 2.02
SMC6-210ENST00000621152 NLGN2Q8NFZ4 835 aa27.63■■■□□ 2.01
SMC6-210ENST00000621152 COL24A1Q17RW2 1714 aa27.62■■■□□ 2.01
SMC6-210ENST00000621152 RNMTO43148 476 aaKnown RBP27.61■■■□□ 2.01
SMC6-210ENST00000621152 TRAPPC3LQ5T215 181 aa27.61■■■□□ 2.01
SMC6-210ENST00000621152 RC3H1Q5TC82 1133 aaKnown RBP27.61■■■□□ 2.01
SMC6-210ENST00000621152 RTCBQ9Y3I0 505 aaKnown RBP27.61■■■□□ 2.01
SMC6-210ENST00000621152 PELP1Q8IZL8 1130 aaKnown RBP27.6■■■□□ 2.01
SMC6-210ENST00000621152 CFAP53Q96M91 514 aa27.6■■■□□ 2.01
SMC6-210ENST00000621152 SLC52A2Q9HAB3 445 aa27.59■■■□□ 2.01
SMC6-210ENST00000621152 RPS6KA4O75676 772 aa27.56■■■□□ 2
SMC6-210ENST00000621152 PPP2R1AP30153 589 aa27.56■■■□□ 2
SMC6-210ENST00000621152 CD2APQ9Y5K6 639 aa27.56■■■□□ 2
SMC6-210ENST00000621152 UBR3Q6ZT12 1888 aa27.55■■■□□ 2
SMC6-210ENST00000621152 ARHGEF1Q92888 912 aaKnown RBP27.55■■■□□ 2
SMC6-210ENST00000621152 COL3A1P02461 1466 aaPredicted RBP27.54■■■□□ 2
SMC6-210ENST00000621152 CNTNAP4Q9C0A0 1308 aa27.54■■■□□ 2
SMC6-210ENST00000621152 SLC39A6Q13433 755 aa27.53■■■□□ 2
SMC6-210ENST00000621152 NUDCQ9Y266 331 aa27.53■■■□□ 2
SMC6-210ENST00000621152 RFC4P35249 363 aa27.52■■■□□ 2
SMC6-210ENST00000621152 ADRA2BP18089 450 aa27.51■■□□□ 1.99
SMC6-210ENST00000621152 CRKLP46109 303 aaKnown RBP27.51■■□□□ 1.99
SMC6-210ENST00000621152 GAS2L2Q8NHY3 880 aa27.51■■□□□ 1.99
SMC6-210ENST00000621152 NLGN1Q8N2Q7 840 aa27.5■■□□□ 1.99
SMC6-210ENST00000621152 GNAT3A8MTJ3 354 aa27.49■■□□□ 1.99
SMC6-210ENST00000621152 DNAJC10Q8IXB1 793 aa27.49■■□□□ 1.99
SMC6-210ENST00000621152 SCN11AQ9UI33 1791 aa27.49■■□□□ 1.99
SMC6-210ENST00000621152 MMP10P09238 476 aa27.48■■□□□ 1.99
SMC6-210ENST00000621152 PRKAR2BP31323 418 aa27.48■■□□□ 1.99
SMC6-210ENST00000621152 IL17REQ8NFR9 667 aa27.48■■□□□ 1.99
SMC6-210ENST00000621152 PHACTR3Q96KR7 559 aa27.48■■□□□ 1.99
SMC6-210ENST00000621152 ZNF831Q5JPB2 1677 aa27.47■■□□□ 1.99
SMC6-210ENST00000621152 U2AF1L5P0DN76 240 aaPredicted RBP27.47■■□□□ 1.99
SMC6-210ENST00000621152 U2AF1Q01081 240 aaKnown RBP eCLIP27.47■■□□□ 1.99
SMC6-210ENST00000621152 YBX3P16989 372 aaKnown RBP eCLIP27.46■■□□□ 1.99
SMC6-210ENST00000621152 INTS5Q6P9B9 1019 aaKnown RBP27.46■■□□□ 1.99
SMC6-210ENST00000621152 RSPH6AQ9H0K4 717 aa27.46■■□□□ 1.99
SMC6-210ENST00000621152 GRIN3BO60391 1043 aa27.45■■□□□ 1.98
SMC6-210ENST00000621152 GYS1P13807 737 aa27.44■■□□□ 1.98
SMC6-210ENST00000621152 TEFQ10587 303 aa27.44■■□□□ 1.98
SMC6-210ENST00000621152 CCDC87Q9NVE4 849 aa27.43■■□□□ 1.98
SMC6-210ENST00000621152 CYP19A1P11511 503 aaPredicted RBP27.42■■□□□ 1.98
SMC6-210ENST00000621152 TTC5Q8N0Z6 440 aa27.42■■□□□ 1.98
SMC6-210ENST00000621152 FCHSD2O94868 740 aa27.41■■□□□ 1.98
SMC6-210ENST00000621152 ZNF784Q8NCA9 323 aaPredicted RBP27.41■■□□□ 1.98
SMC6-210ENST00000621152 SRP68Q9UHB9 627 aaKnown RBP27.41■■□□□ 1.98
SMC6-210ENST00000621152 COL5A3P25940 1745 aaPredicted RBP27.41■■□□□ 1.98
SMC6-210ENST00000621152 MRC1P22897 1456 aa27.4■■□□□ 1.98
SMC6-210ENST00000621152 VSIG10Q8N0Z9 540 aa27.4■■□□□ 1.98
SMC6-210ENST00000621152 MYH14Q7Z406 1995 aaKnown RBP27.39■■□□□ 1.98
SMC6-210ENST00000621152 WWC3Q9ULE0 1092 aa27.39■■□□□ 1.98
SMC6-210ENST00000621152 PARP3Q9Y6F1 533 aa27.39■■□□□ 1.98
SMC6-210ENST00000621152 ZNF790Q6PG37 636 aa27.37■■□□□ 1.97
SMC6-210ENST00000621152 FKBP8Q14318 412 aa27.36■■□□□ 1.97
SMC6-210ENST00000621152 USP42Q9H9J4 1324 aaKnown RBP27.36■■□□□ 1.97
SMC6-210ENST00000621152 ZPR1O75312 459 aa27.35■■□□□ 1.97
SMC6-210ENST00000621152 ZNF496Q96IT1 587 aaPredicted RBP27.35■■□□□ 1.97
SMC6-210ENST00000621152 ADAMTS7Q9UKP4 1686 aa27.35■■□□□ 1.97
SMC6-210ENST00000621152 TJP1Q07157 1748 aa27.35■■□□□ 1.97
SMC6-210ENST00000621152 SOS1Q07889 1333 aaPredicted RBP27.35■■□□□ 1.97
SMC6-210ENST00000621152 STARD3NLO95772 234 aa27.34■■□□□ 1.97
SMC6-210ENST00000621152 RTF1Q92541 710 aaKnown RBP27.34■■□□□ 1.97
SMC6-210ENST00000621152 ZBTB1Q9Y2K1 713 aa27.34■■□□□ 1.97
SMC6-210ENST00000621152 KCPQ6ZWJ8 1503 aa27.34■■□□□ 1.97
SMC6-210ENST00000621152 BTBD11A6QL63 1104 aa27.33■■□□□ 1.97
SMC6-210ENST00000621152 CANXP27824 592 aaKnown RBP27.33■■□□□ 1.97
SMC6-210ENST00000621152 TGFB2P61812 414 aa27.33■■□□□ 1.97
SMC6-210ENST00000621152 CHD4Q14839 1912 aa27.33■■□□□ 1.97
SMC6-210ENST00000621152 DDX10Q13206 875 aaKnown RBP27.32■■□□□ 1.96
SMC6-210ENST00000621152 USPL1Q5W0Q7 1092 aa27.32■■□□□ 1.96
SMC6-210ENST00000621152 TEX13AQ9BXU3 409 aaPredicted RBP27.32■■□□□ 1.96
SMC6-210ENST00000621152 CEMIPQ8WUJ3 1361 aa27.32■■□□□ 1.96
SMC6-210ENST00000621152 A0A0G2JLW4 131 aa27.31■■□□□ 1.96
SMC6-210ENST00000621152 KCNQ3O43525 872 aa27.31■■□□□ 1.96
SMC6-210ENST00000621152 MCM10Q7L590 875 aa27.31■■□□□ 1.96
SMC6-210ENST00000621152 VIRMAQ69YN4 1812 aaKnown RBP27.31■■□□□ 1.96
SMC6-210ENST00000621152 TM4SF1P30408 202 aa27.3■■□□□ 1.96
SMC6-210ENST00000621152 FMNL2Q96PY5 1086 aa27.3■■□□□ 1.96
SMC6-210ENST00000621152 NARFQ9UHQ1 456 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms