RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
PSMB3-212ENST00000620309 PLEKHF1Q96S99 279 aa9.38□□□□□ -0.91
PSMB3-212ENST00000620309 ADAMTS8Q9UP79 889 aa9.38□□□□□ -0.91
PSMB3-212ENST00000620309 LY75O60449 1722 aa9.38□□□□□ -0.91
PSMB3-212ENST00000620309 CICQ96RK0 1608 aaPredicted RBP9.38□□□□□ -0.91
PSMB3-212ENST00000620309 LAMB4A4D0S4 1761 aa9.37□□□□□ -0.91
PSMB3-212ENST00000620309 HMOX1P09601 288 aa9.37□□□□□ -0.91
PSMB3-212ENST00000620309 YBX3P16989 372 aaKnown RBP eCLIP9.37□□□□□ -0.911e-8■□□□□ 11.3
PSMB3-212ENST00000620309 PRKAR2BP31323 418 aa9.37□□□□□ -0.91
PSMB3-212ENST00000620309 SULT6B1Q6IMI4 303 aa9.37□□□□□ -0.91
PSMB3-212ENST00000620309 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
PSMB3-212ENST00000620309 C5P01031 1676 aa9.36□□□□□ -0.91
PSMB3-212ENST00000620309 FCHSD2O94868 740 aa9.36□□□□□ -0.91
PSMB3-212ENST00000620309 HSP90AB1P08238 724 aaKnown RBP9.36□□□□□ -0.91
PSMB3-212ENST00000620309 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
PSMB3-212ENST00000620309 C1orf141Q5JVX7 400 aa9.36□□□□□ -0.91
PSMB3-212ENST00000620309 DDX54Q8TDD1 881 aaKnown RBP9.36□□□□□ -0.91
PSMB3-212ENST00000620309 KDM6AO15550 1401 aaPredicted RBP9.35□□□□□ -0.91
PSMB3-212ENST00000620309 ZNF827Q17R98 1081 aa9.35□□□□□ -0.91
PSMB3-212ENST00000620309 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
PSMB3-212ENST00000620309 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
PSMB3-212ENST00000620309 NLGN2Q8NFZ4 835 aa9.35□□□□□ -0.91
PSMB3-212ENST00000620309 PNNQ9H307 717 aaKnown RBP9.35□□□□□ -0.91
PSMB3-212ENST00000620309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
PSMB3-212ENST00000620309 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
PSMB3-212ENST00000620309 DNAJC5GQ8N7S2 189 aa9.34□□□□□ -0.91
PSMB3-212ENST00000620309 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
PSMB3-212ENST00000620309 SYTL4Q96C24 671 aaPredicted RBP9.34□□□□□ -0.91
PSMB3-212ENST00000620309 RUNDC1Q96C34 613 aa9.34□□□□□ -0.91
PSMB3-212ENST00000620309 ZBED9Q6R2W3 1325 aa9.33□□□□□ -0.92
PSMB3-212ENST00000620309 ZNF521Q96K83 1311 aa9.33□□□□□ -0.92
PSMB3-212ENST00000620309 MAPK8IP3Q9UPT6 1336 aa9.33□□□□□ -0.92
PSMB3-212ENST00000620309 TAF1LQ8IZX4 1826 aa9.33□□□□□ -0.92
PSMB3-212ENST00000620309 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
PSMB3-212ENST00000620309 PHACTR3Q96KR7 559 aa9.33□□□□□ -0.92
PSMB3-212ENST00000620309 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
PSMB3-212ENST00000620309 PNPLA7Q6ZV29 1317 aa9.32□□□□□ -0.92
PSMB3-212ENST00000620309 WDR90Q96KV7 1748 aa9.32□□□□□ -0.92
PSMB3-212ENST00000620309 GRIN3BO60391 1043 aa9.32□□□□□ -0.92
PSMB3-212ENST00000620309 ACSBG1Q96GR2 724 aa9.32□□□□□ -0.92
PSMB3-212ENST00000620309 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
PSMB3-212ENST00000620309 COL5A3P25940 1745 aaPredicted RBP9.31□□□□□ -0.92
PSMB3-212ENST00000620309 TJP1Q07157 1748 aa9.31□□□□□ -0.92
PSMB3-212ENST00000620309 KIF3CO14782 793 aa9.31□□□□□ -0.92
PSMB3-212ENST00000620309 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
PSMB3-212ENST00000620309 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
PSMB3-212ENST00000620309 ZNF530Q6P9A1 599 aaPredicted RBP9.31□□□□□ -0.92
PSMB3-212ENST00000620309 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
PSMB3-212ENST00000620309 CEMIPQ8WUJ3 1361 aa9.31□□□□□ -0.92
PSMB3-212ENST00000620309 APAF1O14727 1248 aa9.3□□□□□ -0.92
PSMB3-212ENST00000620309 TMPOP42166 694 aaKnown RBP9.3□□□□□ -0.92
PSMB3-212ENST00000620309 HNRNPUQ00839 825 aaKnown RBP eCLIP9.3□□□□□ -0.92
PSMB3-212ENST00000620309 CCDC27Q2M243 656 aa9.3□□□□□ -0.92
PSMB3-212ENST00000620309 MTHFSDQ2M296 383 aaKnown RBP9.3□□□□□ -0.92
PSMB3-212ENST00000620309 GAS2L2Q8NHY3 880 aa9.3□□□□□ -0.92
PSMB3-212ENST00000620309 TMOD3Q9NYL9 352 aa9.3□□□□□ -0.92
PSMB3-212ENST00000620309 N4BP2Q86UW6 1770 aaPredicted RBP9.29□□□□□ -0.92
PSMB3-212ENST00000620309 PHKG2P15735 406 aa9.29□□□□□ -0.92
PSMB3-212ENST00000620309 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
PSMB3-212ENST00000620309 COL13A1Q5TAT6 717 aaPredicted RBP9.29□□□□□ -0.92
PSMB3-212ENST00000620309 NGEFQ8N5V2 710 aa9.29□□□□□ -0.92
PSMB3-212ENST00000620309 SMARCC1Q92922 1105 aaPredicted RBP9.29□□□□□ -0.92
PSMB3-212ENST00000620309 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
PSMB3-212ENST00000620309 CACNA1FO60840 1977 aa9.29□□□□□ -0.92
PSMB3-212ENST00000620309 KCPQ6ZWJ8 1503 aa9.29□□□□□ -0.92
PSMB3-212ENST00000620309 CYP27B1O15528 508 aa9.28□□□□□ -0.92
PSMB3-212ENST00000620309 SLC34A2O95436 690 aa9.28□□□□□ -0.92
PSMB3-212ENST00000620309 POLD1P28340 1107 aa9.28□□□□□ -0.92
PSMB3-212ENST00000620309 PRIM1P49642 420 aaKnown RBP9.28□□□□□ -0.92
PSMB3-212ENST00000620309 APLP1P51693 650 aa9.28□□□□□ -0.92
PSMB3-212ENST00000620309 PRELPP51888 382 aa9.28□□□□□ -0.92
PSMB3-212ENST00000620309 SLC27A3Q5K4L6 730 aa9.28□□□□□ -0.92
PSMB3-212ENST00000620309 PELP1Q8IZL8 1130 aaKnown RBP9.28□□□□□ -0.92
PSMB3-212ENST00000620309 TRIM35Q9UPQ4 493 aa9.28□□□□□ -0.92
PSMB3-212ENST00000620309 RRP7AQ9Y3A4 280 aaKnown RBP9.28□□□□□ -0.92
PSMB3-212ENST00000620309 ERVV-2B6SEH9 535 aa9.27□□□□□ -0.93
PSMB3-212ENST00000620309 CABP4P57796 275 aa9.27□□□□□ -0.93
PSMB3-212ENST00000620309 NKX1-1Q15270 411 aaPredicted RBP9.27□□□□□ -0.93
PSMB3-212ENST00000620309 MPRIPQ6WCQ1 1025 aa9.27□□□□□ -0.93
PSMB3-212ENST00000620309 RTF1Q92541 710 aaKnown RBP9.27□□□□□ -0.93
PSMB3-212ENST00000620309 YTHDC1Q96MU7 727 aaKnown RBP9.27□□□□□ -0.93
PSMB3-212ENST00000620309 C4BP0C0L5 1744 aa9.27□□□□□ -0.93
PSMB3-212ENST00000620309 PALLDQ8WX93 1383 aa9.26□□□□□ -0.93
PSMB3-212ENST00000620309 LMOD3Q0VAK6 560 aa9.26□□□□□ -0.93
PSMB3-212ENST00000620309 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
PSMB3-212ENST00000620309 JMYQ8N9B5 988 aa9.26□□□□□ -0.93
PSMB3-212ENST00000620309 GNAT3A8MTJ3 354 aa9.25□□□□□ -0.93
PSMB3-212ENST00000620309 HTATSF1O43719 755 aaKnown RBP9.25□□□□□ -0.93
PSMB3-212ENST00000620309 RIPK4P57078 832 aa9.25□□□□□ -0.93
PSMB3-212ENST00000620309 TEFQ10587 303 aa9.25□□□□□ -0.93
PSMB3-212ENST00000620309 KLHL34Q8N239 644 aa9.25□□□□□ -0.93
PSMB3-212ENST00000620309 CCNL1Q9UK58 526 aaPredicted RBP9.25□□□□□ -0.93
PSMB3-212ENST00000620309 UBR3Q6ZT12 1888 aa9.25□□□□□ -0.93
PSMB3-212ENST00000620309 NEUROD2Q15784 382 aa9.24□□□□□ -0.93
PSMB3-212ENST00000620309 TTC5Q8N0Z6 440 aa9.24□□□□□ -0.93
PSMB3-212ENST00000620309 THUMPD2Q9BTF0 503 aaKnown RBP9.24□□□□□ -0.93
PSMB3-212ENST00000620309 KIAA1551Q9HCM1 1747 aa9.24□□□□□ -0.93
PSMB3-212ENST00000620309 IL16Q14005 1332 aa9.24□□□□□ -0.93
PSMB3-212ENST00000620309 DCTN1Q14203 1278 aa9.23□□□□□ -0.93
PSMB3-212ENST00000620309 MCM10Q7L590 875 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms