RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 LTN1O94822 1766 aa9.77□□□□□ -0.85
CHD7-212ENST00000618450 RBM27Q9P2N5 1060 aaKnown RBP9.77□□□□□ -0.85
CHD7-212ENST00000618450 TSPOAP1O95153 1857 aa9.76□□□□□ -0.85
CHD7-212ENST00000618450 MCTP1Q6DN14 999 aa9.76□□□□□ -0.85
CHD7-212ENST00000618450 INTS4Q96HW7 963 aaKnown RBP9.76□□□□□ -0.85
CHD7-212ENST00000618450 DDX49Q9Y6V7 483 aaKnown RBP9.76□□□□□ -0.85
CHD7-212ENST00000618450 RGPD2P0DJD1 1756 aa9.76□□□□□ -0.85
CHD7-212ENST00000618450 MAP3K19Q56UN5 1328 aa9.76□□□□□ -0.85
CHD7-212ENST00000618450 TMX3Q96JJ7 454 aa9.76□□□□□ -0.85
CHD7-212ENST00000618450 TTC21BQ7Z4L5 1316 aa9.76□□□□□ -0.85
CHD7-212ENST00000618450 EPB41L2O43491 1005 aaKnown RBP9.76□□□□□ -0.85
CHD7-212ENST00000618450 IGSF1Q8N6C5 1336 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 UNC5CLQ8IV45 518 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 FUCA2Q9BTY2 467 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 MYH15Q9Y2K3 1946 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 SLIT1O75093 1534 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 CAVIN1Q6NZI2 390 aaKnown RBP9.75□□□□□ -0.85
CHD7-212ENST00000618450 KIAA1211Q6ZU35 1233 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 MCM10Q7L590 875 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 TTC14Q96N46 770 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 ESYT1Q9BSJ8 1104 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 ARHGAP23Q9P227 1491 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 NAP1L5Q96NT1 182 aaPredicted RBP9.75□□□□□ -0.85
CHD7-212ENST00000618450 PDCL3Q9H2J4 239 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 ZKSCAN5Q9Y2L8 839 aa9.75□□□□□ -0.85
CHD7-212ENST00000618450 PNMA6EA0A0J9YXQ4 647 aa9.74□□□□□ -0.85
CHD7-212ENST00000618450 ERC2O15083 957 aa9.74□□□□□ -0.85
CHD7-212ENST00000618450 ANAPC15P60006 121 aa9.74□□□□□ -0.85
CHD7-212ENST00000618450 CHMLP26374 656 aa9.74□□□□□ -0.85
CHD7-212ENST00000618450 PRDM4Q9UKN5 801 aa9.74□□□□□ -0.85
CHD7-212ENST00000618450 HSP90AA2PQ14568 343 aaPredicted RBP9.74□□□□□ -0.85
CHD7-212ENST00000618450 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
CHD7-212ENST00000618450 NCAPD2Q15021 1401 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
CHD7-212ENST00000618450 MCM5P33992 734 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 AOX1Q06278 1338 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 USP42Q9H9J4 1324 aaKnown RBP9.73□□□□□ -0.85
CHD7-212ENST00000618450 FOXO3O43524 673 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 PI4K2BQ8TCG2 481 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 KCNB2Q92953 911 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 TMEM2Q9UHN6 1383 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 NFAT5O94916 1531 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 PRPF40AO75400 957 aaKnown RBP9.73□□□□□ -0.85
CHD7-212ENST00000618450 POLA2Q14181 598 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 MTHFSDQ2M296 383 aaKnown RBP9.73□□□□□ -0.85
CHD7-212ENST00000618450 SULT6B1Q6IMI4 303 aa9.73□□□□□ -0.85
CHD7-212ENST00000618450 DDX60Q8IY21 1712 aaKnown RBP9.73□□□□□ -0.85
CHD7-212ENST00000618450 MRC1P22897 1456 aa9.72□□□□□ -0.85
CHD7-212ENST00000618450 CEMIPQ8WUJ3 1361 aa9.72□□□□□ -0.85
CHD7-212ENST00000618450 COG3Q96JB2 828 aa9.72□□□□□ -0.85
CHD7-212ENST00000618450 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
CHD7-212ENST00000618450 ZMYND15Q9H091 742 aa9.72□□□□□ -0.85
CHD7-212ENST00000618450 LMTK3Q96Q04 1460 aa9.72□□□□□ -0.85
CHD7-212ENST00000618450 HSPA4P34932 840 aa9.72□□□□□ -0.85
CHD7-212ENST00000618450 GTF2F1P35269 517 aaKnown RBP eCLIP9.71□□□□□ -0.85
CHD7-212ENST00000618450 ST3GAL1Q11201 340 aa9.71□□□□□ -0.85
CHD7-212ENST00000618450 TXNDC2Q86VQ3 553 aa9.71□□□□□ -0.85
CHD7-212ENST00000618450 SBNO1A3KN83 1393 aa9.71□□□□□ -0.85
CHD7-212ENST00000618450 ATP8B2P98198 1209 aa9.71□□□□□ -0.85
CHD7-212ENST00000618450 USP44Q9H0E7 712 aa9.71□□□□□ -0.85
CHD7-212ENST00000618450 ACEP12821 1306 aa9.71□□□□□ -0.85
CHD7-212ENST00000618450 PLEKHG1Q9ULL1 1385 aa9.71□□□□□ -0.86
CHD7-212ENST00000618450 AP5Z1O43299 807 aa9.71□□□□□ -0.86
CHD7-212ENST00000618450 GADD45BO75293 160 aaPredicted RBP9.71□□□□□ -0.86
CHD7-212ENST00000618450 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
CHD7-212ENST00000618450 SOS1Q07889 1333 aaPredicted RBP9.71□□□□□ -0.86
CHD7-212ENST00000618450 SSH3Q8TE77 659 aa9.71□□□□□ -0.86
CHD7-212ENST00000618450 F6X3S4 739 aa9.7□□□□□ -0.86
CHD7-212ENST00000618450 REC8O95072 547 aa9.7□□□□□ -0.86
CHD7-212ENST00000618450 TSHZ3Q63HK5 1081 aa9.7□□□□□ -0.86
CHD7-212ENST00000618450 SYCE3A1L190 88 aa9.7□□□□□ -0.86
CHD7-212ENST00000618450 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD7-212ENST00000618450 JCADQ9P266 1359 aa9.7□□□□□ -0.86
CHD7-212ENST00000618450 ST18O60284 1047 aa9.69□□□□□ -0.86
CHD7-212ENST00000618450 CCT4P50991 539 aaKnown RBP9.69□□□□□ -0.86
CHD7-212ENST00000618450 SPTLC3Q9NUV7 552 aa9.69□□□□□ -0.86
CHD7-212ENST00000618450 HEG1Q9ULI3 1381 aa9.69□□□□□ -0.86
CHD7-212ENST00000618450 LSG1Q9H089 658 aaKnown RBP9.69□□□□□ -0.86
CHD7-212ENST00000618450 LAMA4Q16363 1823 aa9.69□□□□□ -0.86
CHD7-212ENST00000618450 HTATSF1O43719 755 aaKnown RBP9.69□□□□□ -0.86
CHD7-212ENST00000618450 ZNF710Q8N1W2 664 aa9.69□□□□□ -0.86
CHD7-212ENST00000618450 SNRKQ9NRH2 765 aa9.69□□□□□ -0.86
CHD7-212ENST00000618450 MIS18AQ9NYP9 233 aa9.69□□□□□ -0.86
CHD7-212ENST00000618450 GLI3P10071 1580 aa9.69□□□□□ -0.86
CHD7-212ENST00000618450 MCM2P49736 904 aa9.68□□□□□ -0.86
CHD7-212ENST00000618450 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.68□□□□□ -0.86
CHD7-212ENST00000618450 FLT4P35916 1363 aa9.68□□□□□ -0.86
CHD7-212ENST00000618450 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
CHD7-212ENST00000618450 TRIM44Q96DX7 344 aaPredicted RBP9.68□□□□□ -0.86
CHD7-212ENST00000618450 GOLGA6L22H0YM25 854 aa9.68□□□□□ -0.86
CHD7-212ENST00000618450 MX1P20591 662 aa9.68□□□□□ -0.86
CHD7-212ENST00000618450 COL9A3Q14050 684 aaPredicted RBP9.68□□□□□ -0.86
CHD7-212ENST00000618450 EYA1Q99502 592 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 EXOC6BQ9Y2D4 811 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 C5P01031 1676 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 IL17REQ8NFR9 667 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 NEK4P51957 841 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 BABAM1Q9NWV8 329 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 MAP3K5Q99683 1374 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms