RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.04
SRRT-216ENST00000618262 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.03
SRRT-216ENST00000618262 FCHSD2O94868 740 aa15.27■□□□□ 0.03
SRRT-216ENST00000618262 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.03
SRRT-216ENST00000618262 CPDO75976 1380 aa15.26■□□□□ 0.03
SRRT-216ENST00000618262 COL5A2P05997 1499 aaPredicted RBP15.26■□□□□ 0.03
SRRT-216ENST00000618262 SHPRHQ149N8 1683 aa15.26■□□□□ 0.03
SRRT-216ENST00000618262 TMPOP42166 694 aaKnown RBP15.26■□□□□ 0.03
SRRT-216ENST00000618262 ARID3AQ99856 593 aa15.25■□□□□ 0.03
SRRT-216ENST00000618262 ZNF530Q6P9A1 599 aaPredicted RBP15.24■□□□□ 0.03
SRRT-216ENST00000618262 UNC5CLQ8IV45 518 aa15.24■□□□□ 0.03
SRRT-216ENST00000618262 SPATA31A6Q5VVP1 1343 aa15.24■□□□□ 0.03
SRRT-216ENST00000618262 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
SRRT-216ENST00000618262 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
SRRT-216ENST00000618262 RTL1A6NKG5 1358 aa15.23■□□□□ 0.03
SRRT-216ENST00000618262 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
SRRT-216ENST00000618262 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
SRRT-216ENST00000618262 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
SRRT-216ENST00000618262 SYTL4Q96C24 671 aaPredicted RBP15.23■□□□□ 0.03
SRRT-216ENST00000618262 PHF23Q9BUL5 403 aaPredicted RBP15.23■□□□□ 0.03
SRRT-216ENST00000618262 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
SRRT-216ENST00000618262 TATP17735 454 aaPredicted RBP15.23■□□□□ 0.03
SRRT-216ENST00000618262 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
SRRT-216ENST00000618262 ABCA3Q99758 1704 aa15.22■□□□□ 0.03
SRRT-216ENST00000618262 MMP14P50281 582 aa15.22■□□□□ 0.03
SRRT-216ENST00000618262 BLMP54132 1417 aaPredicted RBP15.22■□□□□ 0.03
SRRT-216ENST00000618262 CRYBG1Q9Y4K1 1723 aa15.21■□□□□ 0.03
SRRT-216ENST00000618262 MEGF6O75095 1541 aa15.21■□□□□ 0.03
SRRT-216ENST00000618262 IL2RBP14784 551 aa15.21■□□□□ 0.03
SRRT-216ENST00000618262 ZHX1Q9UKY1 873 aaPredicted RBP15.21■□□□□ 0.03
SRRT-216ENST00000618262 TRIM35Q9UPQ4 493 aa15.21■□□□□ 0.03
SRRT-216ENST00000618262 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
SRRT-216ENST00000618262 NFE2L2Q16236 605 aa15.2■□□□□ 0.02
SRRT-216ENST00000618262 ACSBG1Q96GR2 724 aa15.2■□□□□ 0.02
SRRT-216ENST00000618262 RRAGDQ9NQL2 400 aaPredicted RBP15.2■□□□□ 0.02
SRRT-216ENST00000618262 PHF14O94880 888 aa15.2■□□□□ 0.02
SRRT-216ENST00000618262 CARD10Q9BWT7 1032 aa15.2■□□□□ 0.02
SRRT-216ENST00000618262 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
SRRT-216ENST00000618262 RTF1Q92541 710 aaKnown RBP15.19■□□□□ 0.02
SRRT-216ENST00000618262 CYP27B1O15528 508 aa15.19■□□□□ 0.02
SRRT-216ENST00000618262 ANAPC15P60006 121 aa15.19■□□□□ 0.02
SRRT-216ENST00000618262 KRT24Q2M2I5 525 aa15.18■□□□□ 0.02
SRRT-216ENST00000618262 C1orf141Q5JVX7 400 aa15.18■□□□□ 0.02
SRRT-216ENST00000618262 SPATA31A1Q5TZJ5 1347 aa15.18■□□□□ 0.02
SRRT-216ENST00000618262 FNBP4Q8N3X1 1017 aaPredicted RBP15.18■□□□□ 0.02
SRRT-216ENST00000618262 COL18A1P39060 1754 aa15.18■□□□□ 0.02
SRRT-216ENST00000618262 CRB1P82279 1406 aa15.18■□□□□ 0.02
SRRT-216ENST00000618262 PLEKHO1Q53GL0 409 aaPredicted RBP15.18■□□□□ 0.02
SRRT-216ENST00000618262 ZCRB1Q8TBF4 217 aaKnown RBP15.18■□□□□ 0.02
SRRT-216ENST00000618262 KIF24Q5T7B8 1368 aa15.17■□□□□ 0.02
SRRT-216ENST00000618262 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
SRRT-216ENST00000618262 NECTIN2Q92692 538 aa15.17■□□□□ 0.02
SRRT-216ENST00000618262 SETQ01105 290 aaPredicted RBP15.16■□□□□ 0.02
SRRT-216ENST00000618262 GPATCH11Q8N954 259 aa15.16■□□□□ 0.02
SRRT-216ENST00000618262 ANP32BQ92688 251 aaKnown RBP15.16■□□□□ 0.02
SRRT-216ENST00000618262 EXOC5O00471 708 aa15.16■□□□□ 0.02
SRRT-216ENST00000618262 DDB1Q16531 1140 aa15.16■□□□□ 0.02
SRRT-216ENST00000618262 SMAP1Q8IYB5 467 aaPredicted RBP15.16■□□□□ 0.02
SRRT-216ENST00000618262 GJD4Q96KN9 370 aaPredicted RBP15.16■□□□□ 0.02
SRRT-216ENST00000618262 SPATA31A5Q5VU36 1347 aa15.16■□□□□ 0.02
SRRT-216ENST00000618262 SPATA31A7Q8IWB4 1347 aa15.16■□□□□ 0.02
SRRT-216ENST00000618262 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
SRRT-216ENST00000618262 SLC39A6Q13433 755 aa15.15■□□□□ 0.02
SRRT-216ENST00000618262 KDRP35968 1356 aa15.15■□□□□ 0.02
SRRT-216ENST00000618262 AXDND1Q5T1B0 1012 aaPredicted RBP15.15■□□□□ 0.02
SRRT-216ENST00000618262 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
SRRT-216ENST00000618262 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
SRRT-216ENST00000618262 COL22A1Q8NFW1 1626 aaPredicted RBP15.15■□□□□ 0.02
SRRT-216ENST00000618262 USP54Q70EL1 1684 aa15.15■□□□□ 0.02
SRRT-216ENST00000618262 POTEAQ6S8J7 498 aa15.15■□□□□ 0.02
SRRT-216ENST00000618262 PTF1AQ7RTS3 328 aa15.15■□□□□ 0.02
SRRT-216ENST00000618262 NFATC2IPQ8NCF5 419 aa15.15■□□□□ 0.02
SRRT-216ENST00000618262 FRAT1Q92837 279 aaPredicted RBP15.15■□□□□ 0.02
SRRT-216ENST00000618262 DNAJC2Q99543 621 aaKnown RBP15.15■□□□□ 0.02
SRRT-216ENST00000618262 ZBED9Q6R2W3 1325 aa15.14■□□□□ 0.01
SRRT-216ENST00000618262 SLIT2O94813 1529 aa15.14■□□□□ 0.01
SRRT-216ENST00000618262 KCNQ3O43525 872 aa15.14■□□□□ 0.01
SRRT-216ENST00000618262 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
SRRT-216ENST00000618262 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
SRRT-216ENST00000618262 LMO7Q8WWI1 1683 aa15.14■□□□□ 0.01
SRRT-216ENST00000618262 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
SRRT-216ENST00000618262 VPS72Q15906 364 aa15.13■□□□□ 0.01
SRRT-216ENST00000618262 DDRGK1Q96HY6 314 aa15.13■□□□□ 0.01
SRRT-216ENST00000618262 TRPC5Q9UL62 973 aaPredicted RBP15.13■□□□□ 0.01
SRRT-216ENST00000618262 PHKG2P15735 406 aa15.12■□□□□ 0.01
SRRT-216ENST00000618262 PDE3BQ13370 1112 aa15.12■□□□□ 0.01
SRRT-216ENST00000618262 SEPT12Q8IYM1 358 aa15.12■□□□□ 0.01
SRRT-216ENST00000618262 PLCH1Q4KWH8 1693 aa15.12■□□□□ 0.01
SRRT-216ENST00000618262 E9PSI1 815 aa15.12■□□□□ 0.01
SRRT-216ENST00000618262 KCNQ2O43526 872 aa15.12■□□□□ 0.01
SRRT-216ENST00000618262 KCNQ4P56696 695 aa15.12■□□□□ 0.01
SRRT-216ENST00000618262 COL14A1Q05707 1796 aaKnown RBP15.12■□□□□ 0.01
SRRT-216ENST00000618262 PSEN1P49768 467 aa15.11■□□□□ 0.01
SRRT-216ENST00000618262 TEFQ10587 303 aa15.11■□□□□ 0.01
SRRT-216ENST00000618262 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
SRRT-216ENST00000618262 CC2D2BQ6DHV5 1058 aa15.11■□□□□ 0.01
SRRT-216ENST00000618262 IFNL2Q8IZJ0 200 aa15.11■□□□□ 0.01
SRRT-216ENST00000618262 PTCD1O75127 700 aaKnown RBP15.1■□□□□ 0.01
SRRT-216ENST00000618262 PPP4R3BQ5MIZ7 849 aa15.1■□□□□ 0.01
SRRT-216ENST00000618262 ZNF428Q96B54 188 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms