RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 HSP90AB3PQ58FF7 597 aa21.9■■□□□ 1.1
GABPB1-212ENST00000615671 VAT1LQ9HCJ6 419 aa21.9■■□□□ 1.1
GABPB1-212ENST00000615671 IFIT1P09914 478 aaKnown RBP21.9■■□□□ 1.1
GABPB1-212ENST00000615671 PRPF40BQ6NWY9 871 aaKnown RBP21.9■■□□□ 1.1
GABPB1-212ENST00000615671 ZNF444Q8N0Y2 327 aaPredicted RBP21.9■■□□□ 1.1
GABPB1-212ENST00000615671 LEKR1Q6ZMV7 388 aa21.9■■□□□ 1.1
GABPB1-212ENST00000615671 WDHD1O75717 1129 aaPredicted RBP21.89■■□□□ 1.1
GABPB1-212ENST00000615671 TRIM21P19474 475 aaKnown RBP21.89■■□□□ 1.1
GABPB1-212ENST00000615671 FILIP1Q7Z7B0 1213 aa21.89■■□□□ 1.1
GABPB1-212ENST00000615671 JARID2Q92833 1246 aaPredicted RBP21.89■■□□□ 1.09
GABPB1-212ENST00000615671 FANCIQ9NVI1 1328 aa21.89■■□□□ 1.09
GABPB1-212ENST00000615671 FOXO3O43524 673 aa21.89■■□□□ 1.09
GABPB1-212ENST00000615671 NAPBQ9H115 298 aa21.89■■□□□ 1.09
GABPB1-212ENST00000615671 TMEM57Q8N5G2 664 aa21.89■■□□□ 1.09
GABPB1-212ENST00000615671 ZBTB3Q9H5J0 574 aa21.88■■□□□ 1.09
GABPB1-212ENST00000615671 F6X3S4 739 aa21.88■■□□□ 1.09
GABPB1-212ENST00000615671 UPF3BQ9BZI7 483 aaKnown RBP21.88■■□□□ 1.09
GABPB1-212ENST00000615671 CBFA2T2O43439 604 aa21.87■■□□□ 1.09
GABPB1-212ENST00000615671 PPFIA3O75145 1194 aa21.87■■□□□ 1.09
GABPB1-212ENST00000615671 CEBPAP49715 358 aaPredicted RBP21.87■■□□□ 1.09
GABPB1-212ENST00000615671 ANAPC15P60006 121 aa21.87■■□□□ 1.09
GABPB1-212ENST00000615671 CWC15Q9P013 229 aaKnown RBP21.87■■□□□ 1.09
GABPB1-212ENST00000615671 WASF1Q92558 559 aa21.87■■□□□ 1.09
GABPB1-212ENST00000615671 NSD3Q9BZ95 1437 aa21.87■■□□□ 1.09
GABPB1-212ENST00000615671 CUL5Q93034 780 aa21.86■■□□□ 1.09
GABPB1-212ENST00000615671 IFIT5Q13325 482 aaKnown RBP21.86■■□□□ 1.09
GABPB1-212ENST00000615671 CCDC112Q8NEF3 446 aa21.86■■□□□ 1.09
GABPB1-212ENST00000615671 NUP62CLQ9H1M0 184 aa21.86■■□□□ 1.09
GABPB1-212ENST00000615671 RAB11FIP4Q86YS3 637 aa21.86■■□□□ 1.09
GABPB1-212ENST00000615671 FEZ1Q99689 392 aa21.86■■□□□ 1.09
GABPB1-212ENST00000615671 CCDC113Q9H0I3 377 aa21.86■■□□□ 1.09
GABPB1-212ENST00000615671 AKAP2Q9Y2D5 859 aa21.86■■□□□ 1.09
GABPB1-212ENST00000615671 TAF4BQ92750 862 aa21.85■■□□□ 1.09
GABPB1-212ENST00000615671 POGZQ7Z3K3 1410 aa21.85■■□□□ 1.09
GABPB1-212ENST00000615671 MACROD2A1Z1Q3 448 aa21.85■■□□□ 1.09
GABPB1-212ENST00000615671 JAKMIP3Q5VZ66 844 aa21.85■■□□□ 1.09
GABPB1-212ENST00000615671 CTNNBL1Q8WYA6 563 aaPredicted RBP21.85■■□□□ 1.09
GABPB1-212ENST00000615671 POTEJP0CG39 1038 aa21.84■■□□□ 1.09
GABPB1-212ENST00000615671 NME9Q86XW9 330 aa21.84■■□□□ 1.09
GABPB1-212ENST00000615671 SLC5A1P13866 664 aa21.84■■□□□ 1.09
GABPB1-212ENST00000615671 KCNH5Q8NCM2 988 aa21.84■■□□□ 1.09
GABPB1-212ENST00000615671 ZNF287Q9HBT7 754 aa21.84■■□□□ 1.09
GABPB1-212ENST00000615671 CFAP100Q494V2 611 aa21.84■■□□□ 1.09
GABPB1-212ENST00000615671 SPTY2D1Q68D10 685 aaPredicted RBP21.84■■□□□ 1.09
GABPB1-212ENST00000615671 EPB41L2O43491 1005 aaKnown RBP21.84■■□□□ 1.09
GABPB1-212ENST00000615671 NFE2L2Q16236 605 aa21.84■■□□□ 1.09
GABPB1-212ENST00000615671 CFAP45Q9UL16 551 aa21.84■■□□□ 1.09
GABPB1-212ENST00000615671 KIF21BO75037 1637 aa21.83■■□□□ 1.09
GABPB1-212ENST00000615671 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.09
GABPB1-212ENST00000615671 BRPF3Q9ULD4 1205 aa21.83■■□□□ 1.09
GABPB1-212ENST00000615671 CEP131Q9UPN4 1083 aa21.83■■□□□ 1.09
GABPB1-212ENST00000615671 PDE3AQ14432 1141 aa21.83■■□□□ 1.08
GABPB1-212ENST00000615671 PPP1R12BO60237 982 aaPredicted RBP21.82■■□□□ 1.08
GABPB1-212ENST00000615671 TAF7Q15545 349 aaPredicted RBP21.82■■□□□ 1.08
GABPB1-212ENST00000615671 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
GABPB1-212ENST00000615671 WDR63Q8IWG1 891 aa21.82■■□□□ 1.08
GABPB1-212ENST00000615671 ACSBG1Q96GR2 724 aa21.82■■□□□ 1.08
GABPB1-212ENST00000615671 GOPCQ9HD26 462 aa21.82■■□□□ 1.08
GABPB1-212ENST00000615671 SLC52A1Q9NWF4 448 aa21.82■■□□□ 1.08
GABPB1-212ENST00000615671 CCT2P78371 535 aaKnown RBP21.82■■□□□ 1.08
GABPB1-212ENST00000615671 DRC1Q96MC2 740 aa21.82■■□□□ 1.08
GABPB1-212ENST00000615671 TXLNBQ8N3L3 684 aa21.81■■□□□ 1.08
GABPB1-212ENST00000615671 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
GABPB1-212ENST00000615671 ANKRD30BQ9BXX2 1392 aa21.81■■□□□ 1.08
GABPB1-212ENST00000615671 ZNF397Q8NF99 534 aaPredicted RBP21.81■■□□□ 1.08
GABPB1-212ENST00000615671 F8W031 263 aaPredicted RBP21.81■■□□□ 1.08
GABPB1-212ENST00000615671 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
GABPB1-212ENST00000615671 EZRP15311 586 aaKnown RBP21.81■■□□□ 1.08
GABPB1-212ENST00000615671 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.81■■□□□ 1.08
GABPB1-212ENST00000615671 MMRN2Q9H8L6 949 aa21.81■■□□□ 1.08
GABPB1-212ENST00000615671 NLRP5P59047 1200 aa21.81■■□□□ 1.08
GABPB1-212ENST00000615671 CCDC178Q5BJE1 867 aa21.81■■□□□ 1.08
GABPB1-212ENST00000615671 MAP3K12Q12852 859 aa21.8■■□□□ 1.08
GABPB1-212ENST00000615671 SAMM50Q9Y512 469 aa21.8■■□□□ 1.08
GABPB1-212ENST00000615671 SLC12A7Q9Y666 1083 aa21.8■■□□□ 1.08
GABPB1-212ENST00000615671 ANKRD18BA2A2Z9 1011 aa21.8■■□□□ 1.08
GABPB1-212ENST00000615671 EXOC5O00471 708 aa21.8■■□□□ 1.08
GABPB1-212ENST00000615671 KRT32Q14532 448 aa21.8■■□□□ 1.08
GABPB1-212ENST00000615671 CCDC102AQ96A19 550 aa21.8■■□□□ 1.08
GABPB1-212ENST00000615671 TSG101Q99816 390 aa21.8■■□□□ 1.08
GABPB1-212ENST00000615671 LARP1Q6PKG0 1096 aaKnown RBP21.8■■□□□ 1.08
GABPB1-212ENST00000615671 KIAA0754O94854 1291 aa21.79■■□□□ 1.08
GABPB1-212ENST00000615671 CACNA2D4Q7Z3S7 1137 aa21.79■■□□□ 1.08
GABPB1-212ENST00000615671 CTCFLQ8NI51 663 aaPredicted RBP21.79■■□□□ 1.08
GABPB1-212ENST00000615671 VTI1AQ96AJ9 217 aa21.79■■□□□ 1.08
GABPB1-212ENST00000615671 SNRKQ9NRH2 765 aa21.79■■□□□ 1.08
GABPB1-212ENST00000615671 CLEC11AQ9Y240 323 aa21.79■■□□□ 1.08
GABPB1-212ENST00000615671 U3KPZ7 1027 aaPredicted RBP21.79■■□□□ 1.08
GABPB1-212ENST00000615671 ZSCAN31Q96LW9 406 aaPredicted RBP21.79■■□□□ 1.08
GABPB1-212ENST00000615671 CHRNA2Q15822 529 aa21.79■■□□□ 1.08
GABPB1-212ENST00000615671 CASKIN1Q8WXD9 1431 aa21.79■■□□□ 1.08
GABPB1-212ENST00000615671 RFC4P35249 363 aa21.78■■□□□ 1.08
GABPB1-212ENST00000615671 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
GABPB1-212ENST00000615671 C11orf95C9JLR9 678 aaPredicted RBP21.78■■□□□ 1.08
GABPB1-212ENST00000615671 MX1P20591 662 aa21.78■■□□□ 1.08
GABPB1-212ENST00000615671 CPLX3Q8WVH0 158 aa21.78■■□□□ 1.08
GABPB1-212ENST00000615671 ZNF213O14771 459 aa21.78■■□□□ 1.08
GABPB1-212ENST00000615671 FCHSD2O94868 740 aa21.78■■□□□ 1.08
GABPB1-212ENST00000615671 NESP48681 1621 aa21.77■■□□□ 1.08
GABPB1-212ENST00000615671 USP8P40818 1118 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms