RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 KIF2CQ99661 725 aa18.28■□□□□ 0.52
CDKN1A-208ENST00000615513 PLEKHO1Q53GL0 409 aaPredicted RBP18.27■□□□□ 0.52
CDKN1A-208ENST00000615513 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.52
CDKN1A-208ENST00000615513 OSBPL3Q9H4L5 887 aa18.27■□□□□ 0.52
CDKN1A-208ENST00000615513 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.52
CDKN1A-208ENST00000615513 MST1RQ04912 1400 aa18.27■□□□□ 0.52
CDKN1A-208ENST00000615513 LMO7Q8WWI1 1683 aa18.26■□□□□ 0.51
CDKN1A-208ENST00000615513 OVOS2A0A0G2JMS6 1433 aa18.25■□□□□ 0.51
CDKN1A-208ENST00000615513 EIF4A1P60842 406 aaKnown RBP18.25■□□□□ 0.51
CDKN1A-208ENST00000615513 IL27Q8NEV9 243 aa18.25■□□□□ 0.51
CDKN1A-208ENST00000615513 KIF1AQ12756 1690 aa18.25■□□□□ 0.51
CDKN1A-208ENST00000615513 OTUD7AQ8TE49 926 aaPredicted RBP18.25■□□□□ 0.51
CDKN1A-208ENST00000615513 TRPM3Q9HCF6 1732 aaPredicted RBP18.24■□□□□ 0.51
CDKN1A-208ENST00000615513 SMARCA5O60264 1052 aaPredicted RBP18.24■□□□□ 0.51
CDKN1A-208ENST00000615513 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
CDKN1A-208ENST00000615513 CASC1Q6TDU7 716 aa18.24■□□□□ 0.51
CDKN1A-208ENST00000615513 PROSER2Q86WR7 435 aaPredicted RBP18.24■□□□□ 0.51
CDKN1A-208ENST00000615513 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
CDKN1A-208ENST00000615513 C1orf167Q5SNV9 1468 aa18.24■□□□□ 0.51
CDKN1A-208ENST00000615513 KDM3BQ7LBC6 1761 aa18.24■□□□□ 0.51
CDKN1A-208ENST00000615513 SDSP20132 328 aa18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 ZNF530Q6P9A1 599 aaPredicted RBP18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 C19orf44Q9H6X5 657 aa18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 LGR6Q9HBX8 967 aa18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 ZBTB7CA1YPR0 619 aa18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 TEFQ10587 303 aa18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 KRT28Q7Z3Y7 464 aa18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 LMTK3Q96Q04 1460 aa18.23■□□□□ 0.51
CDKN1A-208ENST00000615513 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
CDKN1A-208ENST00000615513 DDIT3P35638 169 aa18.22■□□□□ 0.51
CDKN1A-208ENST00000615513 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
CDKN1A-208ENST00000615513 ANKRD24Q8TF21 1146 aa18.22■□□□□ 0.51
CDKN1A-208ENST00000615513 APBB1O00213 710 aa18.21■□□□□ 0.51
CDKN1A-208ENST00000615513 USP44Q9H0E7 712 aa18.21■□□□□ 0.51
CDKN1A-208ENST00000615513 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
CDKN1A-208ENST00000615513 RGPD2P0DJD1 1756 aa18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 PDE1AP54750 535 aa18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 XPCQ01831 940 aaPredicted RBP18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 IBTKQ9P2D0 1353 aaPredicted RBP18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 BTBD11A6QL63 1104 aa18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 UBTFL1P0CB47 393 aaPredicted RBP18.2■□□□□ 0.5
CDKN1A-208ENST00000615513 RNMTO43148 476 aaKnown RBP18.19■□□□□ 0.5
CDKN1A-208ENST00000615513 USP26Q9BXU7 913 aa18.19■□□□□ 0.5
CDKN1A-208ENST00000615513 PHAXQ9H814 394 aaKnown RBP18.19■□□□□ 0.5
CDKN1A-208ENST00000615513 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
CDKN1A-208ENST00000615513 K7ELQ4 463 aaPredicted RBP18.19■□□□□ 0.5
CDKN1A-208ENST00000615513 RABEP1Q15276 862 aa18.19■□□□□ 0.5
CDKN1A-208ENST00000615513 EXOC6BQ9Y2D4 811 aa18.19■□□□□ 0.5
CDKN1A-208ENST00000615513 LRRFIP2Q9Y608 721 aaKnown RBP18.19■□□□□ 0.5
CDKN1A-208ENST00000615513 MCM4P33991 863 aa18.18■□□□□ 0.5
CDKN1A-208ENST00000615513 LMOD2Q6P5Q4 547 aa18.18■□□□□ 0.5
CDKN1A-208ENST00000615513 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
CDKN1A-208ENST00000615513 REC8O95072 547 aa18.17■□□□□ 0.5
CDKN1A-208ENST00000615513 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
CDKN1A-208ENST00000615513 DCCP43146 1447 aa18.17■□□□□ 0.5
CDKN1A-208ENST00000615513 PXDNQ92626 1479 aa18.17■□□□□ 0.5
CDKN1A-208ENST00000615513 EIF2S2P20042 333 aaKnown RBP18.17■□□□□ 0.5
CDKN1A-208ENST00000615513 SSH3Q8TE77 659 aa18.17■□□□□ 0.5
CDKN1A-208ENST00000615513 CHPF2Q9P2E5 772 aa18.16■□□□□ 0.5
CDKN1A-208ENST00000615513 HEG1Q9ULI3 1381 aa18.16■□□□□ 0.5
CDKN1A-208ENST00000615513 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
CDKN1A-208ENST00000615513 STAP2Q9UGK3 403 aa18.16■□□□□ 0.5
CDKN1A-208ENST00000615513 AXIN2Q9Y2T1 843 aa18.16■□□□□ 0.5
CDKN1A-208ENST00000615513 ALS2Q96Q42 1657 aa18.15■□□□□ 0.5
CDKN1A-208ENST00000615513 KCNQ3O43525 872 aa18.15■□□□□ 0.5
CDKN1A-208ENST00000615513 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
CDKN1A-208ENST00000615513 ERBB3P21860 1342 aa18.15■□□□□ 0.5
CDKN1A-208ENST00000615513 AOX1Q06278 1338 aa18.15■□□□□ 0.5
CDKN1A-208ENST00000615513 ERC2O15083 957 aa18.14■□□□□ 0.5
CDKN1A-208ENST00000615513 RAB11FIP3O75154 756 aa18.14■□□□□ 0.5
CDKN1A-208ENST00000615513 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.5
CDKN1A-208ENST00000615513 MX1P20591 662 aa18.14■□□□□ 0.5
CDKN1A-208ENST00000615513 BEND3Q5T5X7 828 aa18.14■□□□□ 0.5
CDKN1A-208ENST00000615513 POLA2Q14181 598 aa18.14■□□□□ 0.49
CDKN1A-208ENST00000615513 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
CDKN1A-208ENST00000615513 ATF3P18847 181 aa18.13■□□□□ 0.49
CDKN1A-208ENST00000615513 RTN4Q9NQC3 1192 aaKnown RBP18.13■□□□□ 0.49
CDKN1A-208ENST00000615513 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
CDKN1A-208ENST00000615513 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
CDKN1A-208ENST00000615513 PI4KAP2A4QPH2 592 aa18.13■□□□□ 0.49
CDKN1A-208ENST00000615513 PI4KAP1Q8N8J0 262 aa18.13■□□□□ 0.49
CDKN1A-208ENST00000615513 GIGYF1O75420 1035 aaPredicted RBP18.12■□□□□ 0.49
CDKN1A-208ENST00000615513 HSP90AA1P07900 732 aaKnown RBP18.12■□□□□ 0.49
CDKN1A-208ENST00000615513 DDX11L8A8MPP1 907 aa18.11■□□□□ 0.49
CDKN1A-208ENST00000615513 TMEM94Q12767 1356 aa18.11■□□□□ 0.49
CDKN1A-208ENST00000615513 ABCC6O95255 1503 aa18.11■□□□□ 0.49
CDKN1A-208ENST00000615513 RAB3GAP1Q15042 981 aa18.11■□□□□ 0.49
CDKN1A-208ENST00000615513 PPP1R42Q7Z4L9 355 aa18.11■□□□□ 0.49
CDKN1A-208ENST00000615513 ADCY9O60503 1353 aa18.1■□□□□ 0.49
CDKN1A-208ENST00000615513 SIPA1L3O60292 1781 aaPredicted RBP18.1■□□□□ 0.49
CDKN1A-208ENST00000615513 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
CDKN1A-208ENST00000615513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.09■□□□□ 0.49
CDKN1A-208ENST00000615513 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
CDKN1A-208ENST00000615513 HDAC5Q9UQL6 1122 aa18.09■□□□□ 0.49
CDKN1A-208ENST00000615513 TUBGCP6Q96RT7 1819 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms