RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CYP27B1O15528 508 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 MYL6BP14649 208 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 PROSER3Q2NL68 480 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 NUTM2AQ8IVF1 878 aaPredicted RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 C16orf71Q8IYS4 520 aaPredicted RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 TNS3Q68CZ2 1445 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 RGPD2P0DJD1 1756 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 BRPF1P55201 1214 aaPredicted RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 RGPD1P0DJD0 1748 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 MED1Q15648 1581 aaPredicted RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 PI4KAP2A4QPH2 592 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 HDAC1Q13547 482 aaPredicted RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 PI4KAP1Q8N8J0 262 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 BTG4Q9NY30 223 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 SPG7Q9UQ90 795 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 PTCD1O75127 700 aaKnown RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 PHKG2P15735 406 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 INTS3Q68E01 1043 aaKnown RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 JARID2Q92833 1246 aaPredicted RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 ZBTB47Q9UFB7 747 aaPredicted RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 ZNF330Q9Y3S2 320 aaPredicted RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 STRCQ7RTU9 1775 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 AAMPQ13685 434 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 CHD1LQ86WJ1 897 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 SMC5Q8IY18 1101 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 IFNL2Q8IZJ0 200 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 OTUD7AQ8TE49 926 aaPredicted RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 ZNF496Q96IT1 587 aaPredicted RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 IPO9Q96P70 1041 aaKnown RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 ARXQ96QS3 562 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 EXOC6BQ9Y2D4 811 aa4.31□□□□□ -1.72
LIG4-205ENST00000614526 SOS2Q07890 1332 aaPredicted RBP4.31□□□□□ -1.72
LIG4-205ENST00000614526 GIGYF1O75420 1035 aaPredicted RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 MFAP1P55081 439 aaKnown RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 CABP4P57796 275 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 USP16Q9Y5T5 823 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 PTPRCP08575 1304 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 CEMIPQ8WUJ3 1361 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 NBR1Q14596 966 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 RTL5Q5HYW3 569 aaPredicted RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 TSHZ3Q63HK5 1081 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 CEP85Q6P2H3 762 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 ZNF790Q6PG37 636 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 SYTL4Q96C24 671 aaPredicted RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 NOP58Q9Y2X3 529 aaKnown RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 LRRFIP2Q9Y608 721 aaKnown RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 MEGF6O75095 1541 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 RGPD5Q99666 1765 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 KAT6BQ8WYB5 2073 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 RGS12O14924 1447 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 DCCP43146 1447 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 NUCB1Q02818 461 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 CWF19L2Q2TBE0 894 aaKnown RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 TTC5Q8N0Z6 440 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 ZCRB1Q8TBF4 217 aaKnown RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 SLC52A2Q9HAB3 445 aa4.3□□□□□ -1.72
LIG4-205ENST00000614526 CCDC9Q9Y3X0 531 aaKnown RBP4.3□□□□□ -1.72
LIG4-205ENST00000614526 SLIT3O75094 1523 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 PNMA6EA0A0J9YXQ4 647 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 NBPF7P0C2Y1 421 aaPredicted RBP4.29□□□□□ -1.72
LIG4-205ENST00000614526 CCT4P50991 539 aaKnown RBP4.29□□□□□ -1.72
LIG4-205ENST00000614526 CHMP4BQ9H444 224 aaKnown RBP4.29□□□□□ -1.72
LIG4-205ENST00000614526 MAP3K2Q9Y2U5 619 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 GNAI2P04899 355 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 ANKRD44Q8N8A2 993 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 SPRYD3Q8NCJ5 442 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 SRCIN1Q9C0H9 1055 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 USP44Q9H0E7 712 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 WDR17Q8IZU2 1322 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 TRPM3Q9HCF6 1732 aaPredicted RBP4.29□□□□□ -1.72
LIG4-205ENST00000614526 NCOA3Q9Y6Q9 1424 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 UBTFL1P0CB47 393 aaPredicted RBP4.29□□□□□ -1.72
LIG4-205ENST00000614526 IL2RBP14784 551 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 DNAAF4Q8WXU2 420 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 IL1RAPL2Q9NP60 686 aa4.29□□□□□ -1.72
LIG4-205ENST00000614526 DBF4Q9UBU7 674 aaPredicted RBP4.29□□□□□ -1.72
LIG4-205ENST00000614526 COPS6Q7L5N1 327 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 RIC3Q7Z5B4 369 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 GCC1Q96CN9 775 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 DCAF5Q96JK2 942 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 C9orf78Q9NZ63 289 aaPredicted RBP4.28□□□□□ -1.72
LIG4-205ENST00000614526 DAXXQ9UER7 740 aaPredicted RBP4.28□□□□□ -1.72
LIG4-205ENST00000614526 CAMTA1Q9Y6Y1 1673 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 ATP5J2-PTCD1G3V325 749 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 RPAP2Q8IXW5 612 aaPredicted RBP4.28□□□□□ -1.72
LIG4-205ENST00000614526 XAGE3Q8WTP9 111 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 DCTPP1Q9H773 170 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 KDM6AO15550 1401 aaPredicted RBP4.28□□□□□ -1.72
LIG4-205ENST00000614526 XIRP1Q702N8 1843 aaKnown RBP4.28□□□□□ -1.72
LIG4-205ENST00000614526 KIF1AQ12756 1690 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 A1BGP04217 495 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 RBM42Q9BTD8 480 aaKnown RBP4.28□□□□□ -1.72
LIG4-205ENST00000614526 BABAM1Q9NWV8 329 aa4.28□□□□□ -1.72
LIG4-205ENST00000614526 UBAP1LF5GYI3 381 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 SRGAP3O43295 1099 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 SURF6O75683 361 aaKnown RBP4.27□□□□□ -1.73
LIG4-205ENST00000614526 GNAI3P08754 354 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 MYT1Q01538 1121 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 BEND3Q5T5X7 828 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 PPP1R42Q7Z4L9 355 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms