RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 CENPQQ7L2Z9 268 aaPredicted RBP7.68□□□□□ -1.18
CRNDE-212ENST00000613942 COL18A1P39060 1754 aa7.68□□□□□ -1.18
CRNDE-212ENST00000613942 IL17REQ8NFR9 667 aa7.67□□□□□ -1.18
CRNDE-212ENST00000613942 RTF1Q92541 710 aaKnown RBP7.67□□□□□ -1.18
CRNDE-212ENST00000613942 GNAT3A8MTJ3 354 aa7.67□□□□□ -1.18
CRNDE-212ENST00000613942 CALD1Q05682 793 aaKnown RBP7.67□□□□□ -1.18
CRNDE-212ENST00000613942 C8orf34Q49A92 452 aa7.67□□□□□ -1.18
CRNDE-212ENST00000613942 C8orf58Q8NAV2 365 aa7.67□□□□□ -1.18
CRNDE-212ENST00000613942 CRB1P82279 1406 aa7.67□□□□□ -1.18
CRNDE-212ENST00000613942 MS4A1P11836 297 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 SSH1Q8WYL5 1049 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 LGR6Q9HBX8 967 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 CREBZFQ9NS37 354 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 PCDHB15Q9Y5E8 787 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 NCAPD2Q15021 1401 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 MAP3K5Q99683 1374 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 CAMTA1Q9Y6Y1 1673 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 SPDYE4A6NLX3 237 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 UBAP1LF5GYI3 381 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 CHL1O00533 1208 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 ZNF530Q6P9A1 599 aaPredicted RBP7.66□□□□□ -1.18
CRNDE-212ENST00000613942 STRN4Q9NRL3 753 aa7.66□□□□□ -1.18
CRNDE-212ENST00000613942 TOM1O60784 492 aa7.65□□□□□ -1.18
CRNDE-212ENST00000613942 VAMP4O75379 141 aa7.65□□□□□ -1.18
CRNDE-212ENST00000613942 LHX8Q68G74 356 aa7.65□□□□□ -1.18
CRNDE-212ENST00000613942 SMC4Q9NTJ3 1288 aa7.65□□□□□ -1.18
CRNDE-212ENST00000613942 SEC24BO95487 1268 aa7.65□□□□□ -1.18
CRNDE-212ENST00000613942 PLEKHO1Q53GL0 409 aaPredicted RBP7.65□□□□□ -1.18
CRNDE-212ENST00000613942 MPRIPQ6WCQ1 1025 aa7.65□□□□□ -1.18
CRNDE-212ENST00000613942 ABCA3Q99758 1704 aa7.65□□□□□ -1.19
CRNDE-212ENST00000613942 FGD1P98174 961 aa7.65□□□□□ -1.19
CRNDE-212ENST00000613942 TWISTNBQ3B726 338 aaPredicted RBP7.65□□□□□ -1.19
CRNDE-212ENST00000613942 TOM1L2Q6ZVM7 507 aa7.65□□□□□ -1.19
CRNDE-212ENST00000613942 RAPGEF4Q8WZA2 1011 aa7.65□□□□□ -1.19
CRNDE-212ENST00000613942 TSPYL4Q9UJ04 414 aa7.65□□□□□ -1.19
CRNDE-212ENST00000613942 AHDC1Q5TGY3 1603 aaPredicted RBP7.64□□□□□ -1.19
CRNDE-212ENST00000613942 MEGF6O75095 1541 aa7.64□□□□□ -1.19
CRNDE-212ENST00000613942 HTATSF1O43719 755 aaKnown RBP7.64□□□□□ -1.19
CRNDE-212ENST00000613942 CT47B1P0C2W7 299 aaPredicted RBP7.64□□□□□ -1.19
CRNDE-212ENST00000613942 LARP1Q6PKG0 1096 aaKnown RBP7.64□□□□□ -1.19
CRNDE-212ENST00000613942 USP35Q9P2H5 1018 aa7.64□□□□□ -1.19
CRNDE-212ENST00000613942 LMO7Q8WWI1 1683 aa7.64□□□□□ -1.19
CRNDE-212ENST00000613942 COL5A2P05997 1499 aaPredicted RBP7.64□□□□□ -1.19
CRNDE-212ENST00000613942 WDR17Q8IZU2 1322 aa7.64□□□□□ -1.19
CRNDE-212ENST00000613942 DEKP35659 375 aaKnown RBP7.64□□□□□ -1.19
CRNDE-212ENST00000613942 AMOTQ4VCS5 1084 aa7.64□□□□□ -1.19
CRNDE-212ENST00000613942 AKAP4Q5JQC9 854 aa7.64□□□□□ -1.19
CRNDE-212ENST00000613942 BTG4Q9NY30 223 aa7.64□□□□□ -1.19
CRNDE-212ENST00000613942 FAM208AQ9UK61 1670 aaKnown RBP7.63□□□□□ -1.19
CRNDE-212ENST00000613942 ADAMTS2O95450 1211 aa7.63□□□□□ -1.19
CRNDE-212ENST00000613942 TATP17735 454 aaPredicted RBP7.63□□□□□ -1.19
CRNDE-212ENST00000613942 EVA1CP58658 441 aa7.63□□□□□ -1.19
CRNDE-212ENST00000613942 PDE3AQ14432 1141 aa7.63□□□□□ -1.19
CRNDE-212ENST00000613942 C1orf141Q5JVX7 400 aa7.63□□□□□ -1.19
CRNDE-212ENST00000613942 NOB1Q9ULX3 412 aaKnown RBP7.63□□□□□ -1.19
CRNDE-212ENST00000613942 NUTM2BA6NNL0 878 aaPredicted RBP7.63□□□□□ -1.19
CRNDE-212ENST00000613942 NUTM2EB1AL46 878 aaPredicted RBP7.63□□□□□ -1.19
CRNDE-212ENST00000613942 FAM161AQ3B820 660 aa7.63□□□□□ -1.19
CRNDE-212ENST00000613942 NUTM2AQ8IVF1 878 aaPredicted RBP7.63□□□□□ -1.19
CRNDE-212ENST00000613942 CEMIPQ8WUJ3 1361 aa7.63□□□□□ -1.19
CRNDE-212ENST00000613942 RNMTO43148 476 aaKnown RBP7.62□□□□□ -1.19
CRNDE-212ENST00000613942 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
CRNDE-212ENST00000613942 ABCC6O95255 1503 aa7.62□□□□□ -1.19
CRNDE-212ENST00000613942 COL16A1Q07092 1604 aaPredicted RBP7.62□□□□□ -1.19
CRNDE-212ENST00000613942 PHLPP1O60346 1717 aa7.62□□□□□ -1.19
CRNDE-212ENST00000613942 KCNQ3O43525 872 aa7.62□□□□□ -1.19
CRNDE-212ENST00000613942 TRIM27P14373 513 aa7.62□□□□□ -1.19
CRNDE-212ENST00000613942 ZKSCAN2Q63HK3 967 aa7.62□□□□□ -1.19
CRNDE-212ENST00000613942 MRPL50Q8N5N7 158 aaKnown RBP7.62□□□□□ -1.19
CRNDE-212ENST00000613942 CYP27B1O15528 508 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 ALDH1L2Q3SY69 923 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 LRRC37A3O60309 1634 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 PHKG2P15735 406 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 TEFQ10587 303 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 FTSJ3Q8IY81 847 aaKnown RBP7.61□□□□□ -1.19
CRNDE-212ENST00000613942 CERKQ8TCT0 537 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 NECTIN2Q92692 538 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 CARD10Q9BWT7 1032 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 SPG7Q9UQ90 795 aa7.61□□□□□ -1.19
CRNDE-212ENST00000613942 GALR2O43603 387 aaPredicted RBP7.6□□□□□ -1.19
CRNDE-212ENST00000613942 ATF7IPQ6VMQ6 1270 aa7.6□□□□□ -1.19
CRNDE-212ENST00000613942 ITPRIPQ8IWB1 547 aa7.6□□□□□ -1.19
CRNDE-212ENST00000613942 DZIP1LQ8IYY4 767 aaKnown RBP7.6□□□□□ -1.19
CRNDE-212ENST00000613942 PDZRN3Q9UPQ7 1066 aa7.6□□□□□ -1.19
CRNDE-212ENST00000613942 KDM6AO15550 1401 aaPredicted RBP7.59□□□□□ -1.19
CRNDE-212ENST00000613942 BTBD11A6QL63 1104 aa7.59□□□□□ -1.19
CRNDE-212ENST00000613942 IL2RBP14784 551 aa7.59□□□□□ -1.19
CRNDE-212ENST00000613942 IFNL2Q8IZJ0 200 aa7.59□□□□□ -1.19
CRNDE-212ENST00000613942 ZNF428Q96B54 188 aa7.59□□□□□ -1.19
CRNDE-212ENST00000613942 COL22A1Q8NFW1 1626 aaPredicted RBP7.59□□□□□ -1.19
CRNDE-212ENST00000613942 KIF16BQ96L93 1317 aa7.59□□□□□ -1.19
CRNDE-212ENST00000613942 OVOS2A0A0G2JMS6 1433 aa7.59□□□□□ -1.19
CRNDE-212ENST00000613942 SLC39A6Q13433 755 aa7.59□□□□□ -1.19
CRNDE-212ENST00000613942 MVPQ14764 893 aaKnown RBP7.59□□□□□ -1.19
CRNDE-212ENST00000613942 TMEM57Q8N5G2 664 aa7.59□□□□□ -1.19
CRNDE-212ENST00000613942 ZCRB1Q8TBF4 217 aaKnown RBP7.59□□□□□ -1.19
CRNDE-212ENST00000613942 DDX54Q8TDD1 881 aaKnown RBP7.59□□□□□ -1.19
CRNDE-212ENST00000613942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.59□□□□□ -1.19
CRNDE-212ENST00000613942 BRPF1P55201 1214 aaPredicted RBP7.58□□□□□ -1.2
CRNDE-212ENST00000613942 EIF4A1P60842 406 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 222.9 ms