RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
CDH1-213ENST00000612417 ANKRD45Q5TZF3 282 aa18.32■□□□□ 0.52
CDH1-213ENST00000612417 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
CDH1-213ENST00000612417 RGS12O14924 1447 aa18.31■□□□□ 0.52
CDH1-213ENST00000612417 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
CDH1-213ENST00000612417 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
CDH1-213ENST00000612417 SNX21Q969T3 373 aa18.31■□□□□ 0.52
CDH1-213ENST00000612417 C1orf115Q9H7X2 142 aa18.31■□□□□ 0.52
CDH1-213ENST00000612417 COL18A1P39060 1754 aa18.31■□□□□ 0.52
CDH1-213ENST00000612417 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
CDH1-213ENST00000612417 PRDM11Q9NQV5 511 aa18.3■□□□□ 0.52
CDH1-213ENST00000612417 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
CDH1-213ENST00000612417 KRT24Q2M2I5 525 aa18.3■□□□□ 0.52
CDH1-213ENST00000612417 CPDO75976 1380 aa18.3■□□□□ 0.52
CDH1-213ENST00000612417 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
CDH1-213ENST00000612417 NHSL1Q5SYE7 1610 aa18.29■□□□□ 0.52
CDH1-213ENST00000612417 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
CDH1-213ENST00000612417 RAPGEF4Q8WZA2 1011 aa18.29■□□□□ 0.52
CDH1-213ENST00000612417 NCAPD2Q15021 1401 aa18.28■□□□□ 0.52
CDH1-213ENST00000612417 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
CDH1-213ENST00000612417 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
CDH1-213ENST00000612417 CAMTA1Q9Y6Y1 1673 aa18.27■□□□□ 0.52
CDH1-213ENST00000612417 ATP10DQ9P241 1426 aa18.27■□□□□ 0.52
CDH1-213ENST00000612417 BRPF3Q9ULD4 1205 aa18.27■□□□□ 0.51
CDH1-213ENST00000612417 PTPRCP08575 1304 aa18.26■□□□□ 0.51
CDH1-213ENST00000612417 DDIT3P35638 169 aa18.26■□□□□ 0.51
CDH1-213ENST00000612417 DCTPP1Q9H773 170 aa18.26■□□□□ 0.51
CDH1-213ENST00000612417 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
CDH1-213ENST00000612417 LRRC37A3O60309 1634 aa18.26■□□□□ 0.51
CDH1-213ENST00000612417 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
CDH1-213ENST00000612417 LTBP4Q8N2S1 1624 aa18.25■□□□□ 0.51
CDH1-213ENST00000612417 ABCC6O95255 1503 aa18.25■□□□□ 0.51
CDH1-213ENST00000612417 TATP17735 454 aaPredicted RBP18.25■□□□□ 0.51
CDH1-213ENST00000612417 MCM4P33991 863 aa18.25■□□□□ 0.51
CDH1-213ENST00000612417 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
CDH1-213ENST00000612417 TBC1D9Q6ZT07 1266 aa18.24■□□□□ 0.51
CDH1-213ENST00000612417 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
CDH1-213ENST00000612417 KIF2CQ99661 725 aa18.24■□□□□ 0.51
CDH1-213ENST00000612417 LMO7Q8WWI1 1683 aa18.24■□□□□ 0.51
CDH1-213ENST00000612417 FAM208AQ9UK61 1670 aaKnown RBP18.24■□□□□ 0.51
CDH1-213ENST00000612417 TEFQ10587 303 aa18.23■□□□□ 0.51
CDH1-213ENST00000612417 RPAP2Q8IXW5 612 aaPredicted RBP18.22■□□□□ 0.51
CDH1-213ENST00000612417 BABAM1Q9NWV8 329 aa18.22■□□□□ 0.51
CDH1-213ENST00000612417 CEMIPQ8WUJ3 1361 aa18.22■□□□□ 0.51
CDH1-213ENST00000612417 ABCA3Q99758 1704 aa18.22■□□□□ 0.51
CDH1-213ENST00000612417 CDC45O75419 566 aa18.22■□□□□ 0.51
CDH1-213ENST00000612417 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
CDH1-213ENST00000612417 RNMTO43148 476 aaKnown RBP18.21■□□□□ 0.51
CDH1-213ENST00000612417 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.51
CDH1-213ENST00000612417 PLEKHM2Q8IWE5 1019 aa18.21■□□□□ 0.51
CDH1-213ENST00000612417 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
CDH1-213ENST00000612417 SPG7Q9UQ90 795 aa18.21■□□□□ 0.51
CDH1-213ENST00000612417 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
CDH1-213ENST00000612417 EVA1CP58658 441 aa18.2■□□□□ 0.5
CDH1-213ENST00000612417 GSPT1P15170 499 aaKnown RBP18.19■□□□□ 0.5
CDH1-213ENST00000612417 CEP85Q6P2H3 762 aa18.19■□□□□ 0.5
CDH1-213ENST00000612417 STRN4Q9NRL3 753 aa18.19■□□□□ 0.5
CDH1-213ENST00000612417 BTBD11A6QL63 1104 aa18.19■□□□□ 0.5
CDH1-213ENST00000612417 L1TD1Q5T7N2 865 aaKnown RBP18.19■□□□□ 0.5
CDH1-213ENST00000612417 WDR17Q8IZU2 1322 aa18.19■□□□□ 0.5
CDH1-213ENST00000612417 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
CDH1-213ENST00000612417 MEGF6O75095 1541 aa18.18■□□□□ 0.5
CDH1-213ENST00000612417 TTC22Q5TAA0 569 aa18.18■□□□□ 0.5
CDH1-213ENST00000612417 N4BP2Q86UW6 1770 aaPredicted RBP18.17■□□□□ 0.5
CDH1-213ENST00000612417 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
CDH1-213ENST00000612417 STK31Q9BXU1 1019 aa18.17■□□□□ 0.5
CDH1-213ENST00000612417 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
CDH1-213ENST00000612417 PIP4K2BP78356 416 aa18.16■□□□□ 0.5
CDH1-213ENST00000612417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.16■□□□□ 0.5
CDH1-213ENST00000612417 COL5A2P05997 1499 aaPredicted RBP18.16■□□□□ 0.5
CDH1-213ENST00000612417 CCDC30Q5VVM6 783 aa18.16■□□□□ 0.5
CDH1-213ENST00000612417 AHDC1Q5TGY3 1603 aaPredicted RBP18.16■□□□□ 0.5
CDH1-213ENST00000612417 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
CDH1-213ENST00000612417 PHKG2P15735 406 aa18.15■□□□□ 0.5
CDH1-213ENST00000612417 IFNL2Q8IZJ0 200 aa18.15■□□□□ 0.5
CDH1-213ENST00000612417 TOM1O60784 492 aa18.14■□□□□ 0.5
CDH1-213ENST00000612417 FSD2A1L4K1 749 aa18.14■□□□□ 0.49
CDH1-213ENST00000612417 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
CDH1-213ENST00000612417 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.49
CDH1-213ENST00000612417 MEIS3Q99687 375 aa18.14■□□□□ 0.49
CDH1-213ENST00000612417 OVOS2A0A0G2JMS6 1433 aa18.14■□□□□ 0.49
CDH1-213ENST00000612417 SOS1Q07889 1333 aaPredicted RBP18.13■□□□□ 0.49
CDH1-213ENST00000612417 KCNQ3O43525 872 aa18.13■□□□□ 0.49
CDH1-213ENST00000612417 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
CDH1-213ENST00000612417 KDM3BQ7LBC6 1761 aa18.13■□□□□ 0.49
CDH1-213ENST00000612417 TRAK2O60296 914 aa18.13■□□□□ 0.49
CDH1-213ENST00000612417 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
CDH1-213ENST00000612417 RAB3GAP1Q15042 981 aa18.13■□□□□ 0.49
CDH1-213ENST00000612417 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
CDH1-213ENST00000612417 RTN4Q9NQC3 1192 aaKnown RBP18.13■□□□□ 0.49
CDH1-213ENST00000612417 BTG4Q9NY30 223 aa18.13■□□□□ 0.49
CDH1-213ENST00000612417 PHLPP1O60346 1717 aa18.12■□□□□ 0.49
CDH1-213ENST00000612417 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
CDH1-213ENST00000612417 PKNOX2Q96KN3 472 aa18.12■□□□□ 0.49
CDH1-213ENST00000612417 TUBGCP6Q96RT7 1819 aa18.12■□□□□ 0.49
CDH1-213ENST00000612417 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
CDH1-213ENST00000612417 HDGFL1Q5TGJ6 251 aa18.11■□□□□ 0.49
CDH1-213ENST00000612417 G2E3Q7L622 706 aa18.11■□□□□ 0.49
CDH1-213ENST00000612417 SCN11AQ9UI33 1791 aa18.11■□□□□ 0.49
CDH1-213ENST00000612417 CYP27B1O15528 508 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms