RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 ZNF526Q8TF50 670 aaPredicted RBP24.02■■□□□ 1.44
MUC1-224ENST00000611577 GNPATO15228 680 aa24.01■■□□□ 1.43
MUC1-224ENST00000611577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.01■■□□□ 1.43
MUC1-224ENST00000611577 ASAP1Q9ULH1 1129 aa24.01■■□□□ 1.43
MUC1-224ENST00000611577 ITPK1Q13572 414 aa24■■□□□ 1.43
MUC1-224ENST00000611577 PHKG2P15735 406 aa23.99■■□□□ 1.43
MUC1-224ENST00000611577 ATP6V1AP38606 617 aa23.99■■□□□ 1.43
MUC1-224ENST00000611577 IFNL2Q8IZJ0 200 aa23.99■■□□□ 1.43
MUC1-224ENST00000611577 TNNT2P45379 298 aaPredicted RBP23.97■■□□□ 1.43
MUC1-224ENST00000611577 MORC1Q86VD1 984 aa23.97■■□□□ 1.43
MUC1-224ENST00000611577 POLKQ9UBT6 870 aa23.97■■□□□ 1.43
MUC1-224ENST00000611577 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
MUC1-224ENST00000611577 ATG3Q9NT62 314 aa23.95■■□□□ 1.42
MUC1-224ENST00000611577 MMP10P09238 476 aa23.94■■□□□ 1.42
MUC1-224ENST00000611577 EIF4A2Q14240 407 aaKnown RBP23.94■■□□□ 1.42
MUC1-224ENST00000611577 CC2D1BQ5T0F9 858 aaKnown RBP23.94■■□□□ 1.42
MUC1-224ENST00000611577 KDRP35968 1356 aa23.92■■□□□ 1.42
MUC1-224ENST00000611577 PER1O15534 1290 aaPredicted RBP23.92■■□□□ 1.42
MUC1-224ENST00000611577 AMER1Q5JTC6 1135 aaPredicted RBP23.92■■□□□ 1.42
MUC1-224ENST00000611577 HSPA6P17066 643 aa23.91■■□□□ 1.42
MUC1-224ENST00000611577 CICQ96RK0 1608 aaPredicted RBP23.91■■□□□ 1.42
MUC1-224ENST00000611577 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
MUC1-224ENST00000611577 PXDNLA1KZ92 1463 aa23.9■■□□□ 1.42
MUC1-224ENST00000611577 RTCBQ9Y3I0 505 aaKnown RBP23.9■■□□□ 1.42
MUC1-224ENST00000611577 TRAPPC3LQ5T215 181 aa23.89■■□□□ 1.41
MUC1-224ENST00000611577 IFFO2Q5TF58 517 aa23.89■■□□□ 1.41
MUC1-224ENST00000611577 RBM42Q9BTD8 480 aaKnown RBP23.89■■□□□ 1.41
MUC1-224ENST00000611577 DDX10Q13206 875 aaKnown RBP23.88■■□□□ 1.41
MUC1-224ENST00000611577 SLC4A9Q96Q91 983 aa23.87■■□□□ 1.41
MUC1-224ENST00000611577 C10orf71Q711Q0 1435 aa23.86■■□□□ 1.41
MUC1-224ENST00000611577 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
MUC1-224ENST00000611577 ERVV-2B6SEH9 535 aa23.86■■□□□ 1.41
MUC1-224ENST00000611577 NLGN1Q8N2Q7 840 aa23.86■■□□□ 1.41
MUC1-224ENST00000611577 KIAA1551Q9HCM1 1747 aa23.86■■□□□ 1.41
MUC1-224ENST00000611577 KIF13BQ9NQT8 1826 aa23.86■■□□□ 1.41
MUC1-224ENST00000611577 KIF3CO14782 793 aa23.85■■□□□ 1.41
MUC1-224ENST00000611577 HSP90AB1P08238 724 aaKnown RBP23.85■■□□□ 1.41
MUC1-224ENST00000611577 DCAF5Q96JK2 942 aa23.85■■□□□ 1.41
MUC1-224ENST00000611577 BCS1LQ9Y276 419 aa23.85■■□□□ 1.41
MUC1-224ENST00000611577 NPC1L1Q9UHC9 1359 aa23.85■■□□□ 1.41
MUC1-224ENST00000611577 ZNF831Q5JPB2 1677 aa23.85■■□□□ 1.41
MUC1-224ENST00000611577 ADRA2BP18089 450 aa23.84■■□□□ 1.41
MUC1-224ENST00000611577 TGFB2P61812 414 aa23.84■■□□□ 1.41
MUC1-224ENST00000611577 ARHGEF1Q92888 912 aaKnown RBP23.84■■□□□ 1.41
MUC1-224ENST00000611577 CNTNAP4Q9C0A0 1308 aa23.84■■□□□ 1.41
MUC1-224ENST00000611577 N4BP2Q86UW6 1770 aaPredicted RBP23.83■■□□□ 1.41
MUC1-224ENST00000611577 A0A0G2JLW4 131 aa23.83■■□□□ 1.41
MUC1-224ENST00000611577 PLEKHO1Q53GL0 409 aaPredicted RBP23.83■■□□□ 1.41
MUC1-224ENST00000611577 ZNF530Q6P9A1 599 aaPredicted RBP23.83■■□□□ 1.41
MUC1-224ENST00000611577 COL5A3P25940 1745 aaPredicted RBP23.83■■□□□ 1.41
MUC1-224ENST00000611577 KDM6AO15550 1401 aaPredicted RBP23.83■■□□□ 1.4
MUC1-224ENST00000611577 RFC4P35249 363 aa23.82■■□□□ 1.4
MUC1-224ENST00000611577 RC3H1Q5TC82 1133 aaKnown RBP23.82■■□□□ 1.4
MUC1-224ENST00000611577 CCDC87Q9NVE4 849 aa23.82■■□□□ 1.4
MUC1-224ENST00000611577 C4AP0C0L4 1744 aa23.81■■□□□ 1.4
MUC1-224ENST00000611577 GYS1P13807 737 aa23.81■■□□□ 1.4
MUC1-224ENST00000611577 CABP4P57796 275 aa23.81■■□□□ 1.4
MUC1-224ENST00000611577 RPS6KA4O75676 772 aa23.8■■□□□ 1.4
MUC1-224ENST00000611577 PARP3Q9Y6F1 533 aa23.8■■□□□ 1.4
MUC1-224ENST00000611577 DPEP1P16444 411 aa23.79■■□□□ 1.4
MUC1-224ENST00000611577 AMOTQ4VCS5 1084 aa23.79■■□□□ 1.4
MUC1-224ENST00000611577 ARHGAP27Q6ZUM4 889 aa23.79■■□□□ 1.4
MUC1-224ENST00000611577 FCHSD2O94868 740 aa23.77■■□□□ 1.4
MUC1-224ENST00000611577 C1orf141Q5JVX7 400 aa23.77■■□□□ 1.4
MUC1-224ENST00000611577 AEBP1Q8IUX7 1158 aa23.77■■□□□ 1.4
MUC1-224ENST00000611577 PTCD1O75127 700 aaKnown RBP23.76■■□□□ 1.39
MUC1-224ENST00000611577 MTHFSP49914 203 aa23.76■■□□□ 1.39
MUC1-224ENST00000611577 MYH14Q7Z406 1995 aaKnown RBP23.74■■□□□ 1.39
MUC1-224ENST00000611577 CRKLP46109 303 aaKnown RBP23.73■■□□□ 1.39
MUC1-224ENST00000611577 SRP68Q9UHB9 627 aaKnown RBP23.73■■□□□ 1.39
MUC1-224ENST00000611577 BRCA1P38398 1863 aaKnown RBP23.73■■□□□ 1.39
MUC1-224ENST00000611577 TOMM70O94826 608 aa23.72■■□□□ 1.39
MUC1-224ENST00000611577 APLP1P51693 650 aa23.72■■□□□ 1.39
MUC1-224ENST00000611577 NFATC2IPQ8NCF5 419 aa23.72■■□□□ 1.39
MUC1-224ENST00000611577 SULT6B1Q6IMI4 303 aa23.71■■□□□ 1.39
MUC1-224ENST00000611577 NMRK2Q9NPI5 230 aa23.71■■□□□ 1.39
MUC1-224ENST00000611577 TJP1Q07157 1748 aa23.7■■□□□ 1.39
MUC1-224ENST00000611577 USP42Q9H9J4 1324 aaKnown RBP23.7■■□□□ 1.38
MUC1-224ENST00000611577 KCNA3P22001 575 aa23.7■■□□□ 1.38
MUC1-224ENST00000611577 FKBP8Q14318 412 aa23.7■■□□□ 1.38
MUC1-224ENST00000611577 PIM2Q9P1W9 311 aa23.7■■□□□ 1.38
MUC1-224ENST00000611577 DDR1Q08345 913 aa23.69■■□□□ 1.38
MUC1-224ENST00000611577 C9orf131Q5VYM1 1079 aa23.69■■□□□ 1.38
MUC1-224ENST00000611577 ARFGEF1Q9Y6D6 1849 aa23.68■■□□□ 1.38
MUC1-224ENST00000611577 DALRD3Q5D0E6 543 aaKnown RBP23.67■■□□□ 1.38
MUC1-224ENST00000611577 CFAP53Q96M91 514 aa23.67■■□□□ 1.38
MUC1-224ENST00000611577 PPP2R1AP30153 589 aa23.66■■□□□ 1.38
MUC1-224ENST00000611577 CHRNA5P30532 468 aa23.64■■□□□ 1.37
MUC1-224ENST00000611577 IL13P35225 146 aa23.64■■□□□ 1.37
MUC1-224ENST00000611577 RALBP1Q15311 655 aa23.64■■□□□ 1.37
MUC1-224ENST00000611577 INTS5Q6P9B9 1019 aaKnown RBP23.64■■□□□ 1.37
MUC1-224ENST00000611577 SCN11AQ9UI33 1791 aa23.64■■□□□ 1.37
MUC1-224ENST00000611577 DIAPH1O60610 1272 aaKnown RBP23.63■■□□□ 1.37
MUC1-224ENST00000611577 DNAJC10Q8IXB1 793 aa23.63■■□□□ 1.37
MUC1-224ENST00000611577 C16orf71Q8IYS4 520 aaPredicted RBP23.63■■□□□ 1.37
MUC1-224ENST00000611577 POLRMTO00411 1230 aaKnown RBP23.62■■□□□ 1.37
MUC1-224ENST00000611577 AKAP4Q5JQC9 854 aa23.62■■□□□ 1.37
MUC1-224ENST00000611577 RBM46Q8TBY0 533 aaKnown RBP23.62■■□□□ 1.37
MUC1-224ENST00000611577 RNF181Q9P0P0 153 aa23.62■■□□□ 1.37
MUC1-224ENST00000611577 ADAMTS7Q9UKP4 1686 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms