RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 MBD3O95983 291 aa14.58□□□□□ -0.08
TP53-220ENST00000610623 IL16Q14005 1332 aa14.57□□□□□ -0.08
TP53-220ENST00000610623 TOPAZ1Q8N9V7 1692 aa14.57□□□□□ -0.08
TP53-220ENST00000610623 ANKRD45Q5TZF3 282 aa14.57□□□□□ -0.08
TP53-220ENST00000610623 TSR2Q969E8 191 aaKnown RBP14.57□□□□□ -0.08
TP53-220ENST00000610623 EID1Q9Y6B2 187 aa14.57□□□□□ -0.08
TP53-220ENST00000610623 TMEM63CQ9P1W3 806 aa14.57□□□□□ -0.08
TP53-220ENST00000610623 PTMAP06454 111 aaKnown RBP14.56□□□□□ -0.08
TP53-220ENST00000610623 DNTTIP2Q5QJE6 756 aaKnown RBP14.56□□□□□ -0.08
TP53-220ENST00000610623 NUDT16Q96DE0 195 aaKnown RBP14.56□□□□□ -0.08
TP53-220ENST00000610623 SYCE3A1L190 88 aa14.55□□□□□ -0.08
TP53-220ENST00000610623 ALDH1L2Q3SY69 923 aa14.55□□□□□ -0.08
TP53-220ENST00000610623 PPP4R3BQ5MIZ7 849 aa14.55□□□□□ -0.08
TP53-220ENST00000610623 SLC24A3Q9HC58 644 aa14.55□□□□□ -0.08
TP53-220ENST00000610623 RBM27Q9P2N5 1060 aaKnown RBP14.55□□□□□ -0.08
TP53-220ENST00000610623 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
TP53-220ENST00000610623 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.55□□□□□ -0.08
TP53-220ENST00000610623 ZNF710Q8N1W2 664 aa14.55□□□□□ -0.08
TP53-220ENST00000610623 ZC3H15Q8WU90 426 aaKnown RBP14.55□□□□□ -0.08
TP53-220ENST00000610623 PIBF1Q8WXW3 757 aa14.55□□□□□ -0.08
TP53-220ENST00000610623 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
TP53-220ENST00000610623 MAP2P11137 1827 aaKnown RBP14.55□□□□□ -0.08
TP53-220ENST00000610623 DIAPH1O60610 1272 aaKnown RBP14.54□□□□□ -0.08
TP53-220ENST00000610623 TAF3Q5VWG9 929 aa14.54□□□□□ -0.08
TP53-220ENST00000610623 ROBO2Q9HCK4 1378 aa14.54□□□□□ -0.08
TP53-220ENST00000610623 AATKQ6ZMQ8 1374 aa14.53□□□□□ -0.08
TP53-220ENST00000610623 LTKP29376 864 aa14.53□□□□□ -0.08
TP53-220ENST00000610623 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
TP53-220ENST00000610623 NRKQ7Z2Y5 1582 aa14.53□□□□□ -0.08
TP53-220ENST00000610623 U2SURPO15042 1029 aaKnown RBP14.53□□□□□ -0.08
TP53-220ENST00000610623 ST18O60284 1047 aa14.53□□□□□ -0.08
TP53-220ENST00000610623 CBX1P83916 185 aa14.53□□□□□ -0.08
TP53-220ENST00000610623 PKP1Q13835 747 aa14.53□□□□□ -0.08
TP53-220ENST00000610623 PLEKHF1Q96S99 279 aa14.53□□□□□ -0.08
TP53-220ENST00000610623 CDK12Q9NYV4 1490 aaPredicted RBP14.52□□□□□ -0.08
TP53-220ENST00000610623 CEBPAP49715 358 aaPredicted RBP14.52□□□□□ -0.08
TP53-220ENST00000610623 NOLC1Q14978 699 aaKnown RBP eCLIP14.52□□□□□ -0.08
TP53-220ENST00000610623 UVSSAQ2YD98 709 aa14.52□□□□□ -0.08
TP53-220ENST00000610623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.52□□□□□ -0.08
TP53-220ENST00000610623 SYAP1Q96A49 352 aaPredicted RBP14.52□□□□□ -0.08
TP53-220ENST00000610623 ZNF428Q96B54 188 aa14.52□□□□□ -0.08
TP53-220ENST00000610623 FAM212AQ96EL1 285 aa14.52□□□□□ -0.08
TP53-220ENST00000610623 TSPY26PQ9H489 355 aa14.52□□□□□ -0.08
TP53-220ENST00000610623 PTCH1Q13635 1447 aa14.52□□□□□ -0.09
TP53-220ENST00000610623 THEMISQ8N1K5 641 aaPredicted RBP14.52□□□□□ -0.09
TP53-220ENST00000610623 ZDHHC9Q9Y397 364 aa14.52□□□□□ -0.09
TP53-220ENST00000610623 ZBTB7BO15156 539 aaPredicted RBP14.51□□□□□ -0.09
TP53-220ENST00000610623 FAM184AQ8NB25 1140 aa14.51□□□□□ -0.09
TP53-220ENST00000610623 USP26Q9BXU7 913 aa14.51□□□□□ -0.09
TP53-220ENST00000610623 TBX22Q9Y458 520 aa14.51□□□□□ -0.09
TP53-220ENST00000610623 RIMS1Q86UR5 1692 aaKnown RBP14.51□□□□□ -0.09
TP53-220ENST00000610623 TMPOP42166 694 aaKnown RBP14.5□□□□□ -0.09
TP53-220ENST00000610623 RYDENQ9NUL5 291 aaKnown RBP14.5□□□□□ -0.09
TP53-220ENST00000610623 TRIM35Q9UPQ4 493 aa14.5□□□□□ -0.09
TP53-220ENST00000610623 PTPRUQ92729 1446 aa14.5□□□□□ -0.09
TP53-220ENST00000610623 LRRC7Q96NW7 1537 aa14.5□□□□□ -0.09
TP53-220ENST00000610623 XRN1Q8IZH2 1706 aaKnown RBP14.49□□□□□ -0.09
TP53-220ENST00000610623 PHF14O94880 888 aa14.49□□□□□ -0.09
TP53-220ENST00000610623 RNF214Q8ND24 703 aa14.49□□□□□ -0.09
TP53-220ENST00000610623 SPTLC3Q9NUV7 552 aa14.49□□□□□ -0.09
TP53-220ENST00000610623 POLKQ9UBT6 870 aa14.49□□□□□ -0.09
TP53-220ENST00000610623 FCHSD2O94868 740 aa14.49□□□□□ -0.09
TP53-220ENST00000610623 FKBP5Q13451 457 aaPredicted RBP14.49□□□□□ -0.09
TP53-220ENST00000610623 ATP2B3Q16720 1220 aa14.49□□□□□ -0.09
TP53-220ENST00000610623 CEP170BQ9Y4F5 1589 aaPredicted RBP14.49□□□□□ -0.09
TP53-220ENST00000610623 PRR36Q9H6K5 1346 aa14.49□□□□□ -0.09
TP53-220ENST00000610623 RASEFQ8IZ41 740 aa14.48□□□□□ -0.09
TP53-220ENST00000610623 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
TP53-220ENST00000610623 COG3Q96JB2 828 aa14.48□□□□□ -0.09
TP53-220ENST00000610623 SGIP1Q9BQI5 828 aa14.48□□□□□ -0.09
TP53-220ENST00000610623 WDR70Q9NW82 654 aa14.48□□□□□ -0.09
TP53-220ENST00000610623 INTS3Q68E01 1043 aaKnown RBP14.48□□□□□ -0.09
TP53-220ENST00000610623 ZGPATQ8N5A5 531 aaKnown RBP14.48□□□□□ -0.09
TP53-220ENST00000610623 NSFL1CQ9UNZ2 370 aaKnown RBP14.48□□□□□ -0.09
TP53-220ENST00000610623 PIK3R4Q99570 1358 aa14.48□□□□□ -0.09
TP53-220ENST00000610623 PLEKHG3A1L390 1219 aa14.47□□□□□ -0.09
TP53-220ENST00000610623 PYGBP11216 843 aa14.47□□□□□ -0.09
TP53-220ENST00000610623 GSPT1P15170 499 aaKnown RBP14.47□□□□□ -0.09
TP53-220ENST00000610623 PDCL2Q8N4E4 241 aa14.47□□□□□ -0.09
TP53-220ENST00000610623 NME9Q86XW9 330 aa14.47□□□□□ -0.09
TP53-220ENST00000610623 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
TP53-220ENST00000610623 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
TP53-220ENST00000610623 ZNF142P52746 1687 aaPredicted RBP14.46□□□□□ -0.09
TP53-220ENST00000610623 PDE4CQ08493 712 aa14.46□□□□□ -0.09
TP53-220ENST00000610623 FEZ1Q99689 392 aa14.46□□□□□ -0.09
TP53-220ENST00000610623 DIAPH3Q9NSV4 1193 aa14.46□□□□□ -0.09
TP53-220ENST00000610623 PLEKHM2Q8IWE5 1019 aa14.46□□□□□ -0.1
TP53-220ENST00000610623 GTF2E1P29083 439 aaPredicted RBP14.45□□□□□ -0.1
TP53-220ENST00000610623 CASC1Q6TDU7 716 aa14.45□□□□□ -0.1
TP53-220ENST00000610623 TSC1Q92574 1164 aa14.45□□□□□ -0.1
TP53-220ENST00000610623 JARID2Q92833 1246 aaPredicted RBP14.45□□□□□ -0.1
TP53-220ENST00000610623 SLC26A8Q96RN1 970 aa14.45□□□□□ -0.1
TP53-220ENST00000610623 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
TP53-220ENST00000610623 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
TP53-220ENST00000610623 SIRT2Q8IXJ6 389 aa14.44□□□□□ -0.1
TP53-220ENST00000610623 AMOTL2Q9Y2J4 779 aa14.44□□□□□ -0.1
TP53-220ENST00000610623 USP6P35125 1406 aa14.44□□□□□ -0.1
TP53-220ENST00000610623 ANKRD7Q92527 254 aa14.44□□□□□ -0.1
TP53-220ENST00000610623 BRD1O95696 1058 aa14.43□□□□□ -0.1
TP53-220ENST00000610623 CHRM1P11229 460 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms