RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-222	ENST00000610468	ERVV-2	B6SEH9	535 aa		19.1	■□□□□ 0.65
MUC1-222	ENST00000610468	DCAF5	Q96JK2	942 aa		19.1	■□□□□ 0.65
MUC1-222	ENST00000610468	GNPAT	O15228	680 aa		19.09	■□□□□ 0.65
MUC1-222	ENST00000610468	HSP90AB1	P08238	724 aa	Known RBP	19.09	■□□□□ 0.65
MUC1-222	ENST00000610468	ATP6V1A	P38606	617 aa		19.09	■□□□□ 0.65
MUC1-222	ENST00000610468	KDM6A	O15550	1401 aa	Predicted RBP	19.08	■□□□□ 0.65
MUC1-222	ENST00000610468	GIGYF1	O75420	1035 aa	Predicted RBP	19.07	■□□□□ 0.64
MUC1-222	ENST00000610468	AMOT	Q4VCS5	1084 aa		19.07	■□□□□ 0.64
MUC1-222	ENST00000610468	PLEKHO1	Q53GL0	409 aa	Predicted RBP	19.07	■□□□□ 0.64
MUC1-222	ENST00000610468	SLC4A9	Q96Q91	983 aa		19.07	■□□□□ 0.64
MUC1-222	ENST00000610468	ZNF831	Q5JPB2	1677 aa		19.07	■□□□□ 0.64
MUC1-222	ENST00000610468	ADCY9	O60503	1353 aa		19.06	■□□□□ 0.64
MUC1-222	ENST00000610468	ZNF530	Q6P9A1	599 aa	Predicted RBP	19.05	■□□□□ 0.64
MUC1-222	ENST00000610468	MORC1	Q86VD1	984 aa		19.05	■□□□□ 0.64
MUC1-222	ENST00000610468	SENP3-EIF4A1	A0A087X0R7	540 aa		19.04	■□□□□ 0.64
MUC1-222	ENST00000610468	RC3H1	Q5TC82	1133 aa	Known RBP	19.04	■□□□□ 0.64
MUC1-222	ENST00000610468	AEBP1	Q8IUX7	1158 aa		19.04	■□□□□ 0.64
MUC1-222	ENST00000610468	ATP10D	Q9P241	1426 aa		19.04	■□□□□ 0.64
MUC1-222	ENST00000610468	CNTNAP4	Q9C0A0	1308 aa		19.03	■□□□□ 0.64
MUC1-222	ENST00000610468	MMP10	P09238	476 aa		19.03	■□□□□ 0.64
MUC1-222	ENST00000610468	ADRA2B	P18089	450 aa		19.03	■□□□□ 0.64
MUC1-222	ENST00000610468	RTCB	Q9Y3I0	505 aa	Known RBP	19.03	■□□□□ 0.64
MUC1-222	ENST00000610468	AMER1	Q5JTC6	1135 aa	Predicted RBP	19.02	■□□□□ 0.64
MUC1-222	ENST00000610468	KNSTRN	Q9Y448	316 aa		19.02	■□□□□ 0.64
MUC1-222	ENST00000610468	IL13	P35225	146 aa		19.01	■□□□□ 0.63
MUC1-222	ENST00000610468	TRAPPC3L	Q5T215	181 aa		19.01	■□□□□ 0.63
MUC1-222	ENST00000610468	CCER1	Q8TC90	406 aa	Predicted RBP	19.01	■□□□□ 0.63
MUC1-222	ENST00000610468	MTHFS	P49914	203 aa		19	■□□□□ 0.63
MUC1-222	ENST00000610468	CABP4	P57796	275 aa		19	■□□□□ 0.63
MUC1-222	ENST00000610468	NLGN1	Q8N2Q7	840 aa		19	■□□□□ 0.63
MUC1-222	ENST00000610468	RBM42	Q9BTD8	480 aa	Known RBP	19	■□□□□ 0.63
MUC1-222	ENST00000610468	C10orf71	Q711Q0	1435 aa		19	■□□□□ 0.63
MUC1-222	ENST00000610468	PXDNL	A1KZ92	1463 aa		18.99	■□□□□ 0.63
MUC1-222	ENST00000610468	RPS6KA4	O75676	772 aa		18.99	■□□□□ 0.63
MUC1-222	ENST00000610468	C1orf141	Q5JVX7	400 aa		18.99	■□□□□ 0.63
MUC1-222	ENST00000610468	SULT6B1	Q6IMI4	303 aa		18.99	■□□□□ 0.63
MUC1-222	ENST00000610468	ARHGEF1	Q92888	912 aa	Known RBP	18.99	■□□□□ 0.63
MUC1-222	ENST00000610468	COL5A3	P25940	1745 aa	Predicted RBP	18.99	■□□□□ 0.63
MUC1-222	ENST00000610468	CIC	Q96RK0	1608 aa	Predicted RBP	18.99	■□□□□ 0.63
MUC1-222	ENST00000610468	GYS1	P13807	737 aa		18.97	■□□□□ 0.63
MUC1-222	ENST00000610468	KIF7	Q2M1P5	1343 aa		18.97	■□□□□ 0.63
MUC1-222	ENST00000610468	TGFB2	P61812	414 aa		18.96	■□□□□ 0.63
MUC1-222	ENST00000610468	NFATC2IP	Q8NCF5	419 aa		18.96	■□□□□ 0.63
MUC1-222	ENST00000610468	PTCD1	O75127	700 aa	Known RBP	18.95	■□□□□ 0.62
MUC1-222	ENST00000610468	RFC4	P35249	363 aa		18.95	■□□□□ 0.62
MUC1-222	ENST00000610468	GPBP1L1	Q9HC44	474 aa	Predicted RBP	18.95	■□□□□ 0.62
MUC1-222	ENST00000610468	WWC3	Q9ULE0	1092 aa		18.95	■□□□□ 0.62
MUC1-222	ENST00000610468	KIF13B	Q9NQT8	1826 aa		18.95	■□□□□ 0.62
MUC1-222	ENST00000610468	KIAA1551	Q9HCM1	1747 aa		18.94	■□□□□ 0.62
MUC1-222	ENST00000610468	CEP350	Q5VT06	3117 aa		18.94	■□□□□ 0.62
MUC1-222	ENST00000610468	MRC1	P22897	1456 aa		18.93	■□□□□ 0.62
MUC1-222	ENST00000610468	CRKL	P46109	303 aa	Known RBP	18.93	■□□□□ 0.62
MUC1-222	ENST00000610468	AKAP4	Q5JQC9	854 aa		18.93	■□□□□ 0.62
MUC1-222	ENST00000610468	C4A	P0C0L4	1744 aa		18.92	■□□□□ 0.62
MUC1-222	ENST00000610468	PER1	O15534	1290 aa	Predicted RBP	18.92	■□□□□ 0.62
MUC1-222	ENST00000610468	USP42	Q9H9J4	1324 aa	Known RBP	18.92	■□□□□ 0.62
MUC1-222	ENST00000610468	SLC52A2	Q9HAB3	445 aa		18.91	■□□□□ 0.62
MUC1-222	ENST00000610468	CCDC87	Q9NVE4	849 aa		18.91	■□□□□ 0.62
MUC1-222	ENST00000610468		A0A0G2JLW4	131 aa		18.9	■□□□□ 0.62
MUC1-222	ENST00000610468	INTS5	Q6P9B9	1019 aa	Known RBP	18.9	■□□□□ 0.62
MUC1-222	ENST00000610468	TJP1	Q07157	1748 aa		18.9	■□□□□ 0.62
MUC1-222	ENST00000610468	MYH14	Q7Z406	1995 aa	Known RBP	18.9	■□□□□ 0.62
MUC1-222	ENST00000610468	PARP3	Q9Y6F1	533 aa		18.89	■□□□□ 0.61
MUC1-222	ENST00000610468	DPEP1	P16444	411 aa		18.88	■□□□□ 0.61
MUC1-222	ENST00000610468	ZNF526	Q8TF50	670 aa	Predicted RBP	18.88	■□□□□ 0.61
MUC1-222	ENST00000610468	LGR6	Q9HBX8	967 aa		18.88	■□□□□ 0.61
MUC1-222	ENST00000610468	SRP68	Q9UHB9	627 aa	Known RBP	18.88	■□□□□ 0.61
MUC1-222	ENST00000610468	SCN11A	Q9UI33	1791 aa		18.88	■□□□□ 0.61
MUC1-222	ENST00000610468	KCNA3	P22001	575 aa		18.87	■□□□□ 0.61
MUC1-222	ENST00000610468	DDR1	Q08345	913 aa		18.87	■□□□□ 0.61
MUC1-222	ENST00000610468	FKBP8	Q14318	412 aa		18.87	■□□□□ 0.61
MUC1-222	ENST00000610468	NPC1L1	Q9UHC9	1359 aa		18.87	■□□□□ 0.61
MUC1-222	ENST00000610468	ADAMTS7	Q9UKP4	1686 aa		18.87	■□□□□ 0.61
MUC1-222	ENST00000610468	BCS1L	Q9Y276	419 aa		18.87	■□□□□ 0.61
MUC1-222	ENST00000610468	SOS1	Q07889	1333 aa	Predicted RBP	18.86	■□□□□ 0.61
MUC1-222	ENST00000610468	RNMT	O43148	476 aa	Known RBP	18.86	■□□□□ 0.61
MUC1-222	ENST00000610468	HMOX1	P09601	288 aa		18.86	■□□□□ 0.61
MUC1-222	ENST00000610468	DNAJC10	Q8IXB1	793 aa		18.86	■□□□□ 0.61
MUC1-222	ENST00000610468	KCP	Q6ZWJ8	1503 aa		18.85	■□□□□ 0.61
MUC1-222	ENST00000610468	KIF3C	O14782	793 aa		18.85	■□□□□ 0.61
MUC1-222	ENST00000610468	DIAPH1	O60610	1272 aa	Known RBP	18.85	■□□□□ 0.61
MUC1-222	ENST00000610468	MTHFSD	Q2M296	383 aa	Known RBP	18.85	■□□□□ 0.61
MUC1-222	ENST00000610468	COL3A1	P02461	1466 aa	Predicted RBP	18.84	■□□□□ 0.61
MUC1-222	ENST00000610468	CYP19A1	P11511	503 aa	Predicted RBP	18.84	■□□□□ 0.61
MUC1-222	ENST00000610468	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.83	■□□□□ 0.61
MUC1-222	ENST00000610468	FCHSD2	O94868	740 aa		18.83	■□□□□ 0.6
MUC1-222	ENST00000610468	HSPA6	P17066	643 aa		18.83	■□□□□ 0.6
MUC1-222	ENST00000610468	TM4SF1	P30408	202 aa		18.83	■□□□□ 0.6
MUC1-222	ENST00000610468	CC2D1B	Q5T0F9	858 aa	Known RBP	18.83	■□□□□ 0.6
MUC1-222	ENST00000610468	POLRMT	O00411	1230 aa	Known RBP	18.82	■□□□□ 0.6
MUC1-222	ENST00000610468	SLC39A6	Q13433	755 aa		18.82	■□□□□ 0.6
MUC1-222	ENST00000610468	VSIG10	Q8N0Z9	540 aa		18.82	■□□□□ 0.6
MUC1-222	ENST00000610468	BRCA1	P38398	1863 aa	Known RBP	18.82	■□□□□ 0.6
MUC1-222	ENST00000610468	ARHGAP27	Q6ZUM4	889 aa		18.81	■□□□□ 0.6
MUC1-222	ENST00000610468	PIM2	Q9P1W9	311 aa		18.81	■□□□□ 0.6
MUC1-222	ENST00000610468	ZPR1	O75312	459 aa		18.8	■□□□□ 0.6
MUC1-222	ENST00000610468	USPL1	Q5W0Q7	1092 aa		18.8	■□□□□ 0.6
MUC1-222	ENST00000610468	COL15A1	P39059	1388 aa		18.8	■□□□□ 0.6
MUC1-222	ENST00000610468	NARF	Q9UHQ1	456 aa		18.79	■□□□□ 0.6
MUC1-222	ENST00000610468	ZBTB1	Q9Y2K1	713 aa		18.79	■□□□□ 0.6

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