RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 CCDC12Q8WUD4 166 aaPredicted RBP23.5■■□□□ 1.35
COL15A1-205ENST00000610452 TANGO6Q9C0B7 1094 aa23.5■■□□□ 1.35
COL15A1-205ENST00000610452 EBAG9O00559 213 aa23.5■■□□□ 1.35
COL15A1-205ENST00000610452 RPAP2Q8IXW5 612 aaPredicted RBP23.5■■□□□ 1.35
COL15A1-205ENST00000610452 PAFAH1B1P43034 410 aa23.49■■□□□ 1.35
COL15A1-205ENST00000610452 SPA17Q15506 151 aa23.49■■□□□ 1.35
COL15A1-205ENST00000610452 DNAI1Q9UI46 699 aa23.49■■□□□ 1.35
COL15A1-205ENST00000610452 U2AF2P26368 475 aaKnown RBP eCLIP23.49■■□□□ 1.35
COL15A1-205ENST00000610452 CCAR1Q8IX12 1150 aaKnown RBP23.49■■□□□ 1.35
COL15A1-205ENST00000610452 CCT4P50991 539 aaKnown RBP23.49■■□□□ 1.35
COL15A1-205ENST00000610452 SYCP1Q15431 976 aa23.49■■□□□ 1.35
COL15A1-205ENST00000610452 CCDC30Q5VVM6 783 aa23.48■■□□□ 1.35
COL15A1-205ENST00000610452 RAD54L2Q9Y4B4 1467 aa23.48■■□□□ 1.35
COL15A1-205ENST00000610452 LIG1P18858 919 aa23.48■■□□□ 1.35
COL15A1-205ENST00000610452 SRRTQ9BXP5 876 aaKnown RBP23.48■■□□□ 1.35
COL15A1-205ENST00000610452 SH2B1Q9NRF2 756 aaPredicted RBP23.48■■□□□ 1.35
COL15A1-205ENST00000610452 SARNPP82979 210 aaKnown RBP23.48■■□□□ 1.35
COL15A1-205ENST00000610452 TCEAL9Q9UHQ7 104 aa23.48■■□□□ 1.35
COL15A1-205ENST00000610452 SPECC1LQ69YQ0 1117 aa23.48■■□□□ 1.35
COL15A1-205ENST00000610452 LRPPRCP42704 1394 aaKnown RBP23.48■■□□□ 1.35
COL15A1-205ENST00000610452 PRKAR2BP31323 418 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 MYRIPQ8NFW9 859 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 CDK5RAP3Q96JB5 506 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 EID1Q9Y6B2 187 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 DRC1Q96MC2 740 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 ATP2C2O75185 946 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 IGHDP01880 384 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 KRT32Q14532 448 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 GTF3C6Q969F1 213 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 VPS18Q9P253 973 aa23.47■■□□□ 1.35
COL15A1-205ENST00000610452 GIGYF2Q6Y7W6 1299 aaKnown RBP23.46■■□□□ 1.35
COL15A1-205ENST00000610452 RARSP54136 660 aaKnown RBP23.46■■□□□ 1.35
COL15A1-205ENST00000610452 TRIM22Q8IYM9 498 aa23.46■■□□□ 1.35
COL15A1-205ENST00000610452 STX6O43752 255 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.45■■□□□ 1.34
COL15A1-205ENST00000610452 SLC4A2P04920 1241 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 OTUD6BQ8N6M0 293 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 FAM200AQ8TCP9 573 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 RAD21O60216 631 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 TUBB4AP04350 444 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 SPECC1Q5M775 1068 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 TBC1D9Q6ZT07 1266 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 NBPF11Q86T75 865 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 LIMCH1Q9UPQ0 1083 aa23.45■■□□□ 1.34
COL15A1-205ENST00000610452 CLGNO14967 610 aa23.44■■□□□ 1.34
COL15A1-205ENST00000610452 CPSF2Q9P2I0 782 aaKnown RBP23.44■■□□□ 1.34
COL15A1-205ENST00000610452 GTF2E1P29083 439 aaPredicted RBP23.44■■□□□ 1.34
COL15A1-205ENST00000610452 TTC5Q8N0Z6 440 aa23.44■■□□□ 1.34
COL15A1-205ENST00000610452 CPLX3Q8WVH0 158 aa23.44■■□□□ 1.34
COL15A1-205ENST00000610452 CFAP70Q5T0N1 1121 aa23.44■■□□□ 1.34
COL15A1-205ENST00000610452 RIC3Q7Z5B4 369 aa23.44■■□□□ 1.34
COL15A1-205ENST00000610452 CABP2Q9NPB3 220 aa23.44■■□□□ 1.34
COL15A1-205ENST00000610452 MX1P20591 662 aa23.44■■□□□ 1.34
COL15A1-205ENST00000610452 BMP2KLQ5H9B9 411 aa23.44■■□□□ 1.34
COL15A1-205ENST00000610452 CCDC43Q96MW1 224 aaKnown RBP23.44■■□□□ 1.34
COL15A1-205ENST00000610452 SCAPERQ9BY12 1400 aa23.43■■□□□ 1.34
COL15A1-205ENST00000610452 PLEKHH2Q8IVE3 1493 aa23.43■■□□□ 1.34
COL15A1-205ENST00000610452 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
COL15A1-205ENST00000610452 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
COL15A1-205ENST00000610452 RAB3GAP1Q15042 981 aa23.43■■□□□ 1.34
COL15A1-205ENST00000610452 DHX29Q7Z478 1369 aaKnown RBP23.43■■□□□ 1.34
COL15A1-205ENST00000610452 MAATS1Q7Z4T9 603 aa23.42■■□□□ 1.34
COL15A1-205ENST00000610452 TMEM132EQ6IEE7 984 aa23.42■■□□□ 1.34
COL15A1-205ENST00000610452 A0A1B0GUA9 196 aa23.42■■□□□ 1.34
COL15A1-205ENST00000610452 SNX21Q969T3 373 aa23.42■■□□□ 1.34
COL15A1-205ENST00000610452 HSF2BPO75031 334 aa23.42■■□□□ 1.34
COL15A1-205ENST00000610452 ZNF428Q96B54 188 aa23.41■■□□□ 1.34
COL15A1-205ENST00000610452 PRXQ9BXM0 1461 aa23.41■■□□□ 1.34
COL15A1-205ENST00000610452 SYNJ1O43426 1573 aa23.41■■□□□ 1.34
COL15A1-205ENST00000610452 CDKL5O76039 1030 aa23.41■■□□□ 1.34
COL15A1-205ENST00000610452 MSL1Q68DK7 614 aa23.41■■□□□ 1.34
COL15A1-205ENST00000610452 GCOM1H8Y6P7 765 aaPredicted RBP23.4■■□□□ 1.34
COL15A1-205ENST00000610452 MYZAPP0CAP1 466 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 TFIP11Q9UBB9 837 aaKnown RBP23.4■■□□□ 1.34
COL15A1-205ENST00000610452 AIMP1Q12904 312 aaKnown RBP23.4■■□□□ 1.34
COL15A1-205ENST00000610452 HLTFQ14527 1009 aaKnown RBP eCLIP23.4■■□□□ 1.34
COL15A1-205ENST00000610452 NAA25Q14CX7 972 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 FSIP1Q8NA03 581 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 ATRIPQ8WXE1 791 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 NAA15Q9BXJ9 866 aaKnown RBP23.4■■□□□ 1.34
COL15A1-205ENST00000610452 CTAGE15A4D2H0 777 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 CTAGE8P0CG41 777 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 CTAGE6Q86UF2 777 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 CTAGE4Q8IX94 777 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 IL1RAPL2Q9NP60 686 aa23.4■■□□□ 1.34
COL15A1-205ENST00000610452 KLHL10Q6JEL2 608 aa23.39■■□□□ 1.34
COL15A1-205ENST00000610452 USO1O60763 962 aaKnown RBP23.39■■□□□ 1.34
COL15A1-205ENST00000610452 NUP88Q99567 741 aaPredicted RBP23.39■■□□□ 1.33
COL15A1-205ENST00000610452 ANO6Q4KMQ2 910 aa23.39■■□□□ 1.33
COL15A1-205ENST00000610452 GOLGA1Q92805 767 aa23.39■■□□□ 1.33
COL15A1-205ENST00000610452 RSRC1Q96IZ7 334 aaKnown RBP23.39■■□□□ 1.33
COL15A1-205ENST00000610452 RIOK3O14730 519 aaKnown RBP23.38■■□□□ 1.33
COL15A1-205ENST00000610452 YEATS4O95619 227 aa23.38■■□□□ 1.33
COL15A1-205ENST00000610452 PTGS1P23219 599 aa23.38■■□□□ 1.33
COL15A1-205ENST00000610452 PRPF40BQ6NWY9 871 aaKnown RBP23.38■■□□□ 1.33
COL15A1-205ENST00000610452 CEP112Q8N8E3 955 aa23.38■■□□□ 1.33
COL15A1-205ENST00000610452 TMX4Q9H1E5 349 aaPredicted RBP23.38■■□□□ 1.33
COL15A1-205ENST00000610452 SLC3A2P08195 630 aaKnown RBP23.38■■□□□ 1.33
COL15A1-205ENST00000610452 CCDC121Q6ZUS5 278 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms