RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 ITPK1Q13572 414 aa27.77■■■□□ 2.04
PPFIA3-204ENST00000602492 PANK3Q9H999 370 aa27.77■■■□□ 2.04
PPFIA3-204ENST00000602492 ATG3Q9NT62 314 aa27.76■■■□□ 2.03
PPFIA3-204ENST00000602492 HSP90AB1P08238 724 aaKnown RBP27.73■■■□□ 2.03
PPFIA3-204ENST00000602492 ERVV-2B6SEH9 535 aa27.72■■■□□ 2.03
PPFIA3-204ENST00000602492 PLEKHO1Q53GL0 409 aaPredicted RBP27.72■■■□□ 2.03
PPFIA3-204ENST00000602492 DCAF5Q96JK2 942 aa27.71■■■□□ 2.03
PPFIA3-204ENST00000602492 KDRP35968 1356 aa27.7■■■□□ 2.02
PPFIA3-204ENST00000602492 ATP10DQ9P241 1426 aa27.69■■■□□ 2.02
PPFIA3-204ENST00000602492 ZNF530Q6P9A1 599 aaPredicted RBP27.69■■■□□ 2.02
PPFIA3-204ENST00000602492 MORC1Q86VD1 984 aa27.69■■■□□ 2.02
PPFIA3-204ENST00000602492 AMOTQ4VCS5 1084 aa27.68■■■□□ 2.02
PPFIA3-204ENST00000602492 RBM42Q9BTD8 480 aaKnown RBP27.68■■■□□ 2.02
PPFIA3-204ENST00000602492 RTCBQ9Y3I0 505 aaKnown RBP27.67■■■□□ 2.02
PPFIA3-204ENST00000602492 WWC3Q9ULE0 1092 aa27.66■■■□□ 2.02
PPFIA3-204ENST00000602492 MMP10P09238 476 aa27.65■■■□□ 2.02
PPFIA3-204ENST00000602492 CABP4P57796 275 aa27.65■■■□□ 2.02
PPFIA3-204ENST00000602492 TRAPPC3LQ5T215 181 aa27.65■■■□□ 2.02
PPFIA3-204ENST00000602492 SLC4A9Q96Q91 983 aa27.65■■■□□ 2.02
PPFIA3-204ENST00000602492 KDM6AO15550 1401 aaPredicted RBP27.65■■■□□ 2.02
PPFIA3-204ENST00000602492 ZNF831Q5JPB2 1677 aa27.63■■■□□ 2.01
PPFIA3-204ENST00000602492 RC3H1Q5TC82 1133 aaKnown RBP27.63■■■□□ 2.01
PPFIA3-204ENST00000602492 AEBP1Q8IUX7 1158 aa27.63■■■□□ 2.01
PPFIA3-204ENST00000602492 ADRA2BP18089 450 aa27.62■■■□□ 2.01
PPFIA3-204ENST00000602492 MTHFSP49914 203 aa27.62■■■□□ 2.01
PPFIA3-204ENST00000602492 C1orf141Q5JVX7 400 aa27.62■■■□□ 2.01
PPFIA3-204ENST00000602492 GPBP1L1Q9HC44 474 aaPredicted RBP27.62■■■□□ 2.01
PPFIA3-204ENST00000602492 KNSTRNQ9Y448 316 aa27.62■■■□□ 2.01
PPFIA3-204ENST00000602492 CNTNAP4Q9C0A0 1308 aa27.62■■■□□ 2.01
PPFIA3-204ENST00000602492 ADCY9O60503 1353 aa27.61■■■□□ 2.01
PPFIA3-204ENST00000602492 NLGN1Q8N2Q7 840 aa27.61■■■□□ 2.01
PPFIA3-204ENST00000602492 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
PPFIA3-204ENST00000602492 SULT6B1Q6IMI4 303 aa27.59■■■□□ 2.01
PPFIA3-204ENST00000602492 ARHGEF1Q92888 912 aaKnown RBP27.59■■■□□ 2.01
PPFIA3-204ENST00000602492 CEP350Q5VT06 3117 aa27.59■■■□□ 2.01
PPFIA3-204ENST00000602492 RPS6KA4O75676 772 aa27.58■■■□□ 2.01
PPFIA3-204ENST00000602492 COL5A3P25940 1745 aaPredicted RBP27.58■■■□□ 2.01
PPFIA3-204ENST00000602492 CICQ96RK0 1608 aaPredicted RBP27.57■■■□□ 2
PPFIA3-204ENST00000602492 RFC4P35249 363 aa27.57■■■□□ 2
PPFIA3-204ENST00000602492 PTCD1O75127 700 aaKnown RBP27.56■■■□□ 2
PPFIA3-204ENST00000602492 ZNF526Q8TF50 670 aaPredicted RBP27.56■■■□□ 2
PPFIA3-204ENST00000602492 PXDNLA1KZ92 1463 aa27.56■■■□□ 2
PPFIA3-204ENST00000602492 IL13P35225 146 aa27.55■■■□□ 2
PPFIA3-204ENST00000602492 TGFB2P61812 414 aa27.55■■■□□ 2
PPFIA3-204ENST00000602492 NFATC2IPQ8NCF5 419 aa27.55■■■□□ 2
PPFIA3-204ENST00000602492 GYS1P13807 737 aa27.54■■■□□ 2
PPFIA3-204ENST00000602492 C10orf71Q711Q0 1435 aa27.54■■■□□ 2
PPFIA3-204ENST00000602492 KIF13BQ9NQT8 1826 aa27.54■■■□□ 2
PPFIA3-204ENST00000602492 CCDC87Q9NVE4 849 aa27.54■■■□□ 2
PPFIA3-204ENST00000602492 MYH14Q7Z406 1995 aaKnown RBP27.52■■■□□ 2
PPFIA3-204ENST00000602492 PARP3Q9Y6F1 533 aa27.52■■■□□ 2
PPFIA3-204ENST00000602492 CRKLP46109 303 aaKnown RBP27.51■■□□□ 1.99
PPFIA3-204ENST00000602492 AMER1Q5JTC6 1135 aaPredicted RBP27.51■■□□□ 1.99
PPFIA3-204ENST00000602492 C4AP0C0L4 1744 aa27.5■■□□□ 1.99
PPFIA3-204ENST00000602492 A0A0G2JLW4 131 aa27.5■■□□□ 1.99
PPFIA3-204ENST00000602492 BCS1LQ9Y276 419 aa27.5■■□□□ 1.99
PPFIA3-204ENST00000602492 KIAA1551Q9HCM1 1747 aa27.5■■□□□ 1.99
PPFIA3-204ENST00000602492 N4BP2Q86UW6 1770 aaPredicted RBP27.48■■□□□ 1.99
PPFIA3-204ENST00000602492 AKAP4Q5JQC9 854 aa27.48■■□□□ 1.99
PPFIA3-204ENST00000602492 KIF7Q2M1P5 1343 aa27.46■■□□□ 1.99
PPFIA3-204ENST00000602492 SCN11AQ9UI33 1791 aa27.46■■□□□ 1.99
PPFIA3-204ENST00000602492 DPEP1P16444 411 aa27.46■■□□□ 1.99
PPFIA3-204ENST00000602492 SRP68Q9UHB9 627 aaKnown RBP27.45■■□□□ 1.98
PPFIA3-204ENST00000602492 TJP1Q07157 1748 aa27.44■■□□□ 1.98
PPFIA3-204ENST00000602492 SLC52A2Q9HAB3 445 aa27.44■■□□□ 1.98
PPFIA3-204ENST00000602492 USP42Q9H9J4 1324 aaKnown RBP27.43■■□□□ 1.98
PPFIA3-204ENST00000602492 FCHSD2O94868 740 aa27.43■■□□□ 1.98
PPFIA3-204ENST00000602492 FKBP8Q14318 412 aa27.42■■□□□ 1.98
PPFIA3-204ENST00000602492 ARHGAP27Q6ZUM4 889 aa27.42■■□□□ 1.98
PPFIA3-204ENST00000602492 HMOX1P09601 288 aa27.41■■□□□ 1.98
PPFIA3-204ENST00000602492 INTS5Q6P9B9 1019 aaKnown RBP27.41■■□□□ 1.98
PPFIA3-204ENST00000602492 LGR6Q9HBX8 967 aa27.41■■□□□ 1.98
PPFIA3-204ENST00000602492 HSPA6P17066 643 aa27.4■■□□□ 1.98
PPFIA3-204ENST00000602492 DNAJC10Q8IXB1 793 aa27.4■■□□□ 1.98
PPFIA3-204ENST00000602492 KIF3CO14782 793 aa27.39■■□□□ 1.98
PPFIA3-204ENST00000602492 RNMTO43148 476 aaKnown RBP27.39■■□□□ 1.98
PPFIA3-204ENST00000602492 MRC1P22897 1456 aa27.38■■□□□ 1.97
PPFIA3-204ENST00000602492 DDR1Q08345 913 aa27.38■■□□□ 1.97
PPFIA3-204ENST00000602492 DIAPH1O60610 1272 aaKnown RBP27.37■■□□□ 1.97
PPFIA3-204ENST00000602492 KCNA3P22001 575 aa27.37■■□□□ 1.97
PPFIA3-204ENST00000602492 BRCA1P38398 1863 aaKnown RBP27.37■■□□□ 1.97
PPFIA3-204ENST00000602492 CC2D1BQ5T0F9 858 aaKnown RBP27.37■■□□□ 1.97
PPFIA3-204ENST00000602492 PIM2Q9P1W9 311 aa27.37■■□□□ 1.97
PPFIA3-204ENST00000602492 PER1O15534 1290 aaPredicted RBP27.36■■□□□ 1.97
PPFIA3-204ENST00000602492 ZPR1O75312 459 aa27.36■■□□□ 1.97
PPFIA3-204ENST00000602492 SLC39A6Q13433 755 aa27.36■■□□□ 1.97
PPFIA3-204ENST00000602492 SOS1Q07889 1333 aaPredicted RBP27.36■■□□□ 1.97
PPFIA3-204ENST00000602492 MTHFSDQ2M296 383 aaKnown RBP27.35■■□□□ 1.97
PPFIA3-204ENST00000602492 CYP19A1P11511 503 aaPredicted RBP27.34■■□□□ 1.97
PPFIA3-204ENST00000602492 DALRD3Q5D0E6 543 aaKnown RBP27.34■■□□□ 1.97
PPFIA3-204ENST00000602492 ADAMTS7Q9UKP4 1686 aa27.33■■□□□ 1.97
PPFIA3-204ENST00000602492 POLRMTO00411 1230 aaKnown RBP27.33■■□□□ 1.97
PPFIA3-204ENST00000602492 TM4SF1P30408 202 aa27.33■■□□□ 1.97
PPFIA3-204ENST00000602492 USPL1Q5W0Q7 1092 aa27.33■■□□□ 1.97
PPFIA3-204ENST00000602492 ARFGEF1Q9Y6D6 1849 aa27.32■■□□□ 1.96
PPFIA3-204ENST00000602492 KCPQ6ZWJ8 1503 aa27.31■■□□□ 1.96
PPFIA3-204ENST00000602492 VIRMAQ69YN4 1812 aaKnown RBP27.31■■□□□ 1.96
PPFIA3-204ENST00000602492 C9orf131Q5VYM1 1079 aa27.3■■□□□ 1.96
PPFIA3-204ENST00000602492 VSIG10Q8N0Z9 540 aa27.3■■□□□ 1.96
PPFIA3-204ENST00000602492 COL15A1P39059 1388 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms