RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 CEP170BQ9Y4F5 1589 aaPredicted RBP27.22■■□□□ 1.95
CAPN12-212ENST00000601953 ZSCAN23Q3MJ62 389 aa27.21■■□□□ 1.95
CAPN12-212ENST00000601953 BMP2KLQ5H9B9 411 aa27.21■■□□□ 1.95
CAPN12-212ENST00000601953 RGS12O14924 1447 aa27.21■■□□□ 1.95
CAPN12-212ENST00000601953 CD2BP2O95400 341 aaKnown RBP27.2■■□□□ 1.95
CAPN12-212ENST00000601953 AMPHP49418 695 aa27.2■■□□□ 1.95
CAPN12-212ENST00000601953 FGD1P98174 961 aa27.2■■□□□ 1.95
CAPN12-212ENST00000601953 KRT24Q2M2I5 525 aa27.2■■□□□ 1.95
CAPN12-212ENST00000601953 ANKRD45Q5TZF3 282 aa27.2■■□□□ 1.95
CAPN12-212ENST00000601953 USP54Q70EL1 1684 aa27.2■■□□□ 1.94
CAPN12-212ENST00000601953 MTHFSDQ2M296 383 aaKnown RBP27.2■■□□□ 1.94
CAPN12-212ENST00000601953 RBSNQ9H1K0 784 aa27.2■■□□□ 1.94
CAPN12-212ENST00000601953 EYA1Q99502 592 aa27.19■■□□□ 1.94
CAPN12-212ENST00000601953 PTPRCP08575 1304 aa27.18■■□□□ 1.94
CAPN12-212ENST00000601953 NLRP6P59044 892 aa27.17■■□□□ 1.94
CAPN12-212ENST00000601953 GAS2L2Q8NHY3 880 aa27.17■■□□□ 1.94
CAPN12-212ENST00000601953 FOXD4L1Q9NU39 408 aa27.17■■□□□ 1.94
CAPN12-212ENST00000601953 CCDC39Q9UFE4 941 aa27.17■■□□□ 1.94
CAPN12-212ENST00000601953 RTF1Q92541 710 aaKnown RBP27.16■■□□□ 1.94
CAPN12-212ENST00000601953 ZSCAN20P17040 1043 aaPredicted RBP27.16■■□□□ 1.94
CAPN12-212ENST00000601953 CAVIN1Q6NZI2 390 aaKnown RBP27.16■■□□□ 1.94
CAPN12-212ENST00000601953 MARF1Q9Y4F3 1742 aaKnown RBP27.16■■□□□ 1.94
CAPN12-212ENST00000601953 FOXO3O43524 673 aa27.15■■□□□ 1.94
CAPN12-212ENST00000601953 ZHX1Q9UKY1 873 aaPredicted RBP27.15■■□□□ 1.94
CAPN12-212ENST00000601953 NCLP19338 710 aaKnown RBP27.14■■□□□ 1.94
CAPN12-212ENST00000601953 NUCB2P80303 420 aa27.14■■□□□ 1.94
CAPN12-212ENST00000601953 HTATSF1O43719 755 aaKnown RBP27.14■■□□□ 1.93
CAPN12-212ENST00000601953 LMBRD1Q9NUN5 540 aa27.14■■□□□ 1.93
CAPN12-212ENST00000601953 PRDM10Q9NQV6 1147 aa27.13■■□□□ 1.93
CAPN12-212ENST00000601953 HOXC9P31274 260 aa27.12■■□□□ 1.93
CAPN12-212ENST00000601953 PRIM1P49642 420 aaKnown RBP27.12■■□□□ 1.93
CAPN12-212ENST00000601953 DCTPP1Q9H773 170 aa27.12■■□□□ 1.93
CAPN12-212ENST00000601953 MCTP1Q6DN14 999 aa27.11■■□□□ 1.93
CAPN12-212ENST00000601953 ATP10DQ9P241 1426 aa27.11■■□□□ 1.93
CAPN12-212ENST00000601953 TSPYL4Q9UJ04 414 aa27.11■■□□□ 1.93
CAPN12-212ENST00000601953 CYP2E1P05181 493 aaPredicted RBP27.1■■□□□ 1.93
CAPN12-212ENST00000601953 ANKRD44Q8N8A2 993 aa27.1■■□□□ 1.93
CAPN12-212ENST00000601953 NWD1Q149M9 1564 aa27.1■■□□□ 1.93
CAPN12-212ENST00000601953 RPAP2Q8IXW5 612 aaPredicted RBP27.09■■□□□ 1.93
CAPN12-212ENST00000601953 GTPBP4Q9BZE4 634 aaKnown RBP27.09■■□□□ 1.93
CAPN12-212ENST00000601953 LRRC37A3O60309 1634 aa27.09■■□□□ 1.93
CAPN12-212ENST00000601953 MYRIPQ8NFW9 859 aa27.09■■□□□ 1.93
CAPN12-212ENST00000601953 MIS18AQ9NYP9 233 aa27.08■■□□□ 1.93
CAPN12-212ENST00000601953 CHD2O14647 1828 aaKnown RBP27.08■■□□□ 1.93
CAPN12-212ENST00000601953 SLC4A2P04920 1241 aa27.08■■□□□ 1.93
CAPN12-212ENST00000601953 ABTB2Q8N961 1025 aa27.08■■□□□ 1.93
CAPN12-212ENST00000601953 ARID3AQ99856 593 aa27.07■■□□□ 1.92
CAPN12-212ENST00000601953 MSH6P52701 1360 aa27.07■■□□□ 1.92
CAPN12-212ENST00000601953 KIF20AO95235 890 aa27.06■■□□□ 1.92
CAPN12-212ENST00000601953 ANKLE2Q86XL3 938 aa27.06■■□□□ 1.92
CAPN12-212ENST00000601953 LRSAM1Q6UWE0 723 aa27.06■■□□□ 1.92
CAPN12-212ENST00000601953 RBM42Q9BTD8 480 aaKnown RBP27.06■■□□□ 1.92
CAPN12-212ENST00000601953 RTL1A6NKG5 1358 aa27.06■■□□□ 1.92
CAPN12-212ENST00000601953 PHF8Q9UPP1 1060 aa27.05■■□□□ 1.92
CAPN12-212ENST00000601953 GNAT3A8MTJ3 354 aa27.04■■□□□ 1.92
CAPN12-212ENST00000601953 NUTM2GQ5VZR2 741 aa27.04■■□□□ 1.92
CAPN12-212ENST00000601953 CEP85Q6P2H3 762 aa27.04■■□□□ 1.92
CAPN12-212ENST00000601953 ZNF142P52746 1687 aaPredicted RBP27.04■■□□□ 1.92
CAPN12-212ENST00000601953 TBC1D9Q6ZT07 1266 aa27.04■■□□□ 1.92
CAPN12-212ENST00000601953 PRIMPOLQ96LW4 560 aa27.04■■□□□ 1.92
CAPN12-212ENST00000601953 TRHP20396 242 aaPredicted RBP27.03■■□□□ 1.92
CAPN12-212ENST00000601953 KIAA2012Q0VF49 1180 aa27.02■■□□□ 1.92
CAPN12-212ENST00000601953 GTF2F1P35269 517 aaKnown RBP eCLIP27.01■■□□□ 1.92
CAPN12-212ENST00000601953 RABEP1Q15276 862 aa27.01■■□□□ 1.92
CAPN12-212ENST00000601953 PLEKHM2Q8IWE5 1019 aa27.01■■□□□ 1.92
CAPN12-212ENST00000601953 MEIS3Q99687 375 aa27.01■■□□□ 1.91
CAPN12-212ENST00000601953 CWC22Q9HCG8 908 aaKnown RBP27.01■■□□□ 1.91
CAPN12-212ENST00000601953 HMGN5P82970 282 aaKnown RBP27■■□□□ 1.91
CAPN12-212ENST00000601953 BABAM1Q9NWV8 329 aa27■■□□□ 1.91
CAPN12-212ENST00000601953 SOS1Q07889 1333 aaPredicted RBP27■■□□□ 1.91
CAPN12-212ENST00000601953 MAP3K5Q99683 1374 aa27■■□□□ 1.91
CAPN12-212ENST00000601953 CCT4P50991 539 aaKnown RBP27■■□□□ 1.91
CAPN12-212ENST00000601953 GPT2Q8TD30 523 aa27■■□□□ 1.91
CAPN12-212ENST00000601953 LETM1O95202 739 aaPredicted RBP26.99■■□□□ 1.91
CAPN12-212ENST00000601953 G2E3Q7L622 706 aa26.99■■□□□ 1.91
CAPN12-212ENST00000601953 CDC45O75419 566 aa26.98■■□□□ 1.91
CAPN12-212ENST00000601953 STK31Q9BXU1 1019 aa26.97■■□□□ 1.91
CAPN12-212ENST00000601953 ADGRL3Q9HAR2 1447 aa26.97■■□□□ 1.91
CAPN12-212ENST00000601953 AK9Q5TCS8 1911 aa26.97■■□□□ 1.91
CAPN12-212ENST00000601953 GSPT1P15170 499 aaKnown RBP26.97■■□□□ 1.91
CAPN12-212ENST00000601953 IL17REQ8NFR9 667 aa26.97■■□□□ 1.91
CAPN12-212ENST00000601953 PRPF40AO75400 957 aaKnown RBP26.96■■□□□ 1.91
CAPN12-212ENST00000601953 ZNF710Q8N1W2 664 aa26.95■■□□□ 1.91
CAPN12-212ENST00000601953 NFAT5O94916 1531 aa26.95■■□□□ 1.91
CAPN12-212ENST00000601953 CCDC30Q5VVM6 783 aa26.95■■□□□ 1.9
CAPN12-212ENST00000601953 IP6K1Q92551 441 aa26.95■■□□□ 1.9
CAPN12-212ENST00000601953 RBM27Q9P2N5 1060 aaKnown RBP26.95■■□□□ 1.9
CAPN12-212ENST00000601953 LTN1O94822 1766 aa26.95■■□□□ 1.9
CAPN12-212ENST00000601953 PPP4R3BQ5MIZ7 849 aa26.94■■□□□ 1.9
CAPN12-212ENST00000601953 TTC22Q5TAA0 569 aa26.94■■□□□ 1.9
CAPN12-212ENST00000601953 TMEM63CQ9P1W3 806 aa26.94■■□□□ 1.9
CAPN12-212ENST00000601953 FAM208AQ9UK61 1670 aaKnown RBP26.94■■□□□ 1.9
CAPN12-212ENST00000601953 HMMRO75330 724 aa26.93■■□□□ 1.9
CAPN12-212ENST00000601953 TAF7Q15545 349 aaPredicted RBP26.93■■□□□ 1.9
CAPN12-212ENST00000601953 LTV1Q96GA3 475 aaPredicted RBP26.93■■□□□ 1.9
CAPN12-212ENST00000601953 F6X3S4 739 aa26.93■■□□□ 1.9
CAPN12-212ENST00000601953 C14orf37Q86TY3 774 aa26.93■■□□□ 1.9
CAPN12-212ENST00000601953 SYCE3A1L190 88 aa26.92■■□□□ 1.9
CAPN12-212ENST00000601953 SLC4A10Q6U841 1118 aa26.92■■□□□ 1.9
CAPN12-212ENST00000601953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms