RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 SLC4A9Q96Q91 983 aa23.51■■□□□ 1.35
IRF3-230ENST00000601809 LGR6Q9HBX8 967 aa23.51■■□□□ 1.35
IRF3-230ENST00000601809 COL5A3P25940 1745 aaPredicted RBP23.5■■□□□ 1.35
IRF3-230ENST00000601809 RNMTO43148 476 aaKnown RBP23.49■■□□□ 1.35
IRF3-230ENST00000601809 ZBTB7AO95365 584 aa23.49■■□□□ 1.35
IRF3-230ENST00000601809 ITPK1Q13572 414 aa23.49■■□□□ 1.35
IRF3-230ENST00000601809 SIPA1L3O60292 1781 aaPredicted RBP23.49■■□□□ 1.35
IRF3-230ENST00000601809 CABP4P57796 275 aa23.48■■□□□ 1.35
IRF3-230ENST00000601809 RALBP1Q15311 655 aa23.48■■□□□ 1.35
IRF3-230ENST00000601809 PHACTR3Q96KR7 559 aa23.48■■□□□ 1.35
IRF3-230ENST00000601809 MTFR1LQ9H019 292 aa23.48■■□□□ 1.35
IRF3-230ENST00000601809 AMIGO3Q86WK7 504 aa23.47■■□□□ 1.35
IRF3-230ENST00000601809 NFATC2IPQ8NCF5 419 aa23.47■■□□□ 1.35
IRF3-230ENST00000601809 LINC00116Q8NCU8 138 aa23.47■■□□□ 1.35
IRF3-230ENST00000601809 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
IRF3-230ENST00000601809 PRKAR2BP31323 418 aa23.46■■□□□ 1.35
IRF3-230ENST00000601809 TJP1Q07157 1748 aa23.46■■□□□ 1.35
IRF3-230ENST00000601809 SLC52A2Q9HAB3 445 aa23.46■■□□□ 1.35
IRF3-230ENST00000601809 TFCP2L1Q9NZI6 479 aa23.46■■□□□ 1.35
IRF3-230ENST00000601809 MAP3K5Q99683 1374 aa23.45■■□□□ 1.34
IRF3-230ENST00000601809 UBR2Q8IWV8 1755 aa23.45■■□□□ 1.34
IRF3-230ENST00000601809 FCHSD2O94868 740 aa23.44■■□□□ 1.34
IRF3-230ENST00000601809 SLC16A10Q8TF71 515 aa23.44■■□□□ 1.34
IRF3-230ENST00000601809 ATF5Q9Y2D1 282 aaPredicted RBP23.44■■□□□ 1.34
IRF3-230ENST00000601809 KCPQ6ZWJ8 1503 aa23.43■■□□□ 1.34
IRF3-230ENST00000601809 CEMIPQ8WUJ3 1361 aa23.43■■□□□ 1.34
IRF3-230ENST00000601809 U2AF1L5P0DN76 240 aaPredicted RBP23.43■■□□□ 1.34
IRF3-230ENST00000601809 U2AF1Q01081 240 aaKnown RBP eCLIP23.43■■□□□ 1.34
IRF3-230ENST00000601809 COL23A1Q86Y22 540 aaPredicted RBP23.43■■□□□ 1.34
IRF3-230ENST00000601809 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
IRF3-230ENST00000601809 MYH14Q7Z406 1995 aaKnown RBP23.42■■□□□ 1.34
IRF3-230ENST00000601809 HMGB2P26583 209 aaKnown RBP23.42■■□□□ 1.34
IRF3-230ENST00000601809 ATP6V1AP38606 617 aa23.42■■□□□ 1.34
IRF3-230ENST00000601809 IL17REQ8NFR9 667 aa23.42■■□□□ 1.34
IRF3-230ENST00000601809 GNAT3A8MTJ3 354 aa23.4■■□□□ 1.34
IRF3-230ENST00000601809 MYBBP1AQ9BQG0 1328 aaKnown RBP23.39■■□□□ 1.34
IRF3-230ENST00000601809 PLEKHF1Q96S99 279 aa23.39■■□□□ 1.33
IRF3-230ENST00000601809 SMIM5Q71RC9 77 aa23.38■■□□□ 1.33
IRF3-230ENST00000601809 RBM42Q9BTD8 480 aaKnown RBP23.38■■□□□ 1.33
IRF3-230ENST00000601809 DLG5Q8TDM6 1919 aa23.37■■□□□ 1.33
IRF3-230ENST00000601809 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
IRF3-230ENST00000601809 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
IRF3-230ENST00000601809 RC3H1Q5TC82 1133 aaKnown RBP23.36■■□□□ 1.33
IRF3-230ENST00000601809 FLAD1Q8NFF5 587 aa23.36■■□□□ 1.33
IRF3-230ENST00000601809 AK7Q96M32 723 aa23.36■■□□□ 1.33
IRF3-230ENST00000601809 PTCD1O75127 700 aaKnown RBP23.35■■□□□ 1.33
IRF3-230ENST00000601809 SSFA2P28290 1259 aa23.35■■□□□ 1.33
IRF3-230ENST00000601809 SLC39A6Q13433 755 aa23.35■■□□□ 1.33
IRF3-230ENST00000601809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.34■■□□□ 1.33
IRF3-230ENST00000601809 C4AP0C0L4 1744 aa23.33■■□□□ 1.32
IRF3-230ENST00000601809 GNPATO15228 680 aa23.32■■□□□ 1.32
IRF3-230ENST00000601809 PPP1R1BQ9UD71 204 aaPredicted RBP23.32■■□□□ 1.32
IRF3-230ENST00000601809 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
IRF3-230ENST00000601809 ARXQ96QS3 562 aa23.31■■□□□ 1.32
IRF3-230ENST00000601809 HTATSF1O43719 755 aaKnown RBP23.3■■□□□ 1.32
IRF3-230ENST00000601809 PHF14O94880 888 aa23.29■■□□□ 1.32
IRF3-230ENST00000601809 RPS6KA4O75676 772 aa23.28■■□□□ 1.32
IRF3-230ENST00000601809 CRKLP46109 303 aaKnown RBP23.28■■□□□ 1.32
IRF3-230ENST00000601809 TEFQ10587 303 aa23.28■■□□□ 1.32
IRF3-230ENST00000601809 INTS5Q6P9B9 1019 aaKnown RBP23.28■■□□□ 1.32
IRF3-230ENST00000601809 DNAJC10Q8IXB1 793 aa23.28■■□□□ 1.32
IRF3-230ENST00000601809 VSIG10Q8N0Z9 540 aa23.28■■□□□ 1.32
IRF3-230ENST00000601809 FHDC1Q9C0D6 1143 aaPredicted RBP23.28■■□□□ 1.32
IRF3-230ENST00000601809 CYP19A1P11511 503 aaPredicted RBP23.27■■□□□ 1.32
IRF3-230ENST00000601809 ZNF790Q6PG37 636 aa23.27■■□□□ 1.32
IRF3-230ENST00000601809 MCM10Q7L590 875 aa23.27■■□□□ 1.32
IRF3-230ENST00000601809 SYT17Q9BSW7 474 aa23.27■■□□□ 1.32
IRF3-230ENST00000601809 MSH5O43196 834 aa23.26■■□□□ 1.31
IRF3-230ENST00000601809 DCTN1Q14203 1278 aa23.26■■□□□ 1.31
IRF3-230ENST00000601809 MSL1Q68DK7 614 aa23.26■■□□□ 1.31
IRF3-230ENST00000601809 RTCBQ9Y3I0 505 aaKnown RBP23.26■■□□□ 1.31
IRF3-230ENST00000601809 ADRA2BP18089 450 aa23.25■■□□□ 1.31
IRF3-230ENST00000601809 NFE2L2Q16236 605 aa23.25■■□□□ 1.31
IRF3-230ENST00000601809 ZNF496Q96IT1 587 aaPredicted RBP23.25■■□□□ 1.31
IRF3-230ENST00000601809 KCNQ3O43525 872 aa23.24■■□□□ 1.31
IRF3-230ENST00000601809 POLD1P28340 1107 aa23.24■■□□□ 1.31
IRF3-230ENST00000601809 ARHGEF1Q92888 912 aaKnown RBP23.24■■□□□ 1.31
IRF3-230ENST00000601809 HEG1Q9ULI3 1381 aa23.24■■□□□ 1.31
IRF3-230ENST00000601809 KDM3BQ7LBC6 1761 aa23.24■■□□□ 1.31
IRF3-230ENST00000601809 TRAPPC3LQ5T215 181 aa23.22■■□□□ 1.31
IRF3-230ENST00000601809 TTC5Q8N0Z6 440 aa23.21■■□□□ 1.31
IRF3-230ENST00000601809 RTF1Q92541 710 aaKnown RBP23.21■■□□□ 1.31
IRF3-230ENST00000601809 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
IRF3-230ENST00000601809 CCDC87Q9NVE4 849 aa23.21■■□□□ 1.31
IRF3-230ENST00000601809 SOS1Q07889 1333 aaPredicted RBP23.21■■□□□ 1.31
IRF3-230ENST00000601809 BTBD11A6QL63 1104 aa23.2■■□□□ 1.3
IRF3-230ENST00000601809 UTRNP46939 3433 aa23.2■■□□□ 1.3
IRF3-230ENST00000601809 GYS1P13807 737 aa23.19■■□□□ 1.3
IRF3-230ENST00000601809 ZBTB1Q9Y2K1 713 aa23.19■■□□□ 1.3
IRF3-230ENST00000601809 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
IRF3-230ENST00000601809 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
IRF3-230ENST00000601809 USP42Q9H9J4 1324 aaKnown RBP23.17■■□□□ 1.3
IRF3-230ENST00000601809 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
IRF3-230ENST00000601809 NEFMP07197 916 aa23.17■■□□□ 1.3
IRF3-230ENST00000601809 TAF7Q15545 349 aaPredicted RBP23.17■■□□□ 1.3
IRF3-230ENST00000601809 FMNL2Q96PY5 1086 aa23.17■■□□□ 1.3
IRF3-230ENST00000601809 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
IRF3-230ENST00000601809 TMPOP42166 694 aaKnown RBP23.16■■□□□ 1.3
IRF3-230ENST00000601809 CCDC184Q52MB2 194 aa23.15■■□□□ 1.3
IRF3-230ENST00000601809 NLGN2Q8NFZ4 835 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms