RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 CASZ1Q86V15 1759 aa21.44■■□□□ 1.02
CCDC61-208ENST00000601763 ITPK1Q13572 414 aa21.44■■□□□ 1.02
CCDC61-208ENST00000601763 SMIM5Q71RC9 77 aa21.44■■□□□ 1.02
CCDC61-208ENST00000601763 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
CCDC61-208ENST00000601763 C5P01031 1676 aa21.44■■□□□ 1.02
CCDC61-208ENST00000601763 TAF1LQ8IZX4 1826 aa21.43■■□□□ 1.02
CCDC61-208ENST00000601763 AMIGO3Q86WK7 504 aa21.43■■□□□ 1.02
CCDC61-208ENST00000601763 SLC52A2Q9HAB3 445 aa21.43■■□□□ 1.02
CCDC61-208ENST00000601763 MRC1P22897 1456 aa21.43■■□□□ 1.02
CCDC61-208ENST00000601763 LOC102724428A0A0B4J2F2 783 aa21.42■■□□□ 1.02
CCDC61-208ENST00000601763 SIK1P57059 783 aa21.42■■□□□ 1.02
CCDC61-208ENST00000601763 GAS2L2Q8NHY3 880 aa21.42■■□□□ 1.02
CCDC61-208ENST00000601763 SMARCC1Q92922 1105 aaPredicted RBP21.42■■□□□ 1.02
CCDC61-208ENST00000601763 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
CCDC61-208ENST00000601763 SLC39A6Q13433 755 aa21.41■■□□□ 1.02
CCDC61-208ENST00000601763 DCTN1Q14203 1278 aa21.41■■□□□ 1.02
CCDC61-208ENST00000601763 LINC00116Q8NCU8 138 aa21.41■■□□□ 1.02
CCDC61-208ENST00000601763 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
CCDC61-208ENST00000601763 PTCD1O75127 700 aaKnown RBP21.39■■□□□ 1.01
CCDC61-208ENST00000601763 MCM10Q7L590 875 aa21.39■■□□□ 1.01
CCDC61-208ENST00000601763 PNPLA7Q6ZV29 1317 aa21.38■■□□□ 1.01
CCDC61-208ENST00000601763 CCDC146Q8IYE0 955 aa21.38■■□□□ 1.01
CCDC61-208ENST00000601763 C4BP0C0L5 1744 aa21.38■■□□□ 1.01
CCDC61-208ENST00000601763 DLG5Q8TDM6 1919 aa21.37■■□□□ 1.01
CCDC61-208ENST00000601763 ZBTB7AO95365 584 aa21.37■■□□□ 1.01
CCDC61-208ENST00000601763 ATP6V1AP38606 617 aa21.37■■□□□ 1.01
CCDC61-208ENST00000601763 SIPA1L3O60292 1781 aaPredicted RBP21.37■■□□□ 1.01
CCDC61-208ENST00000601763 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
CCDC61-208ENST00000601763 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
CCDC61-208ENST00000601763 TFCP2L1Q9NZI6 479 aa21.35■■□□□ 1.01
CCDC61-208ENST00000601763 LRP5O75197 1615 aa21.35■■□□□ 1.01
CCDC61-208ENST00000601763 TJP1Q07157 1748 aa21.35■■□□□ 1.01
CCDC61-208ENST00000601763 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
CCDC61-208ENST00000601763 KCNQ3O43525 872 aa21.34■■□□□ 1.01
CCDC61-208ENST00000601763 THUMPD2Q9BTF0 503 aaKnown RBP21.34■■□□□ 1.01
CCDC61-208ENST00000601763 ATF5Q9Y2D1 282 aaPredicted RBP21.34■■□□□ 1.01
CCDC61-208ENST00000601763 QSER1Q2KHR3 1735 aa21.33■■□□□ 1.01
CCDC61-208ENST00000601763 NFE2L2Q16236 605 aa21.33■■□□□ 1.01
CCDC61-208ENST00000601763 COL23A1Q86Y22 540 aaPredicted RBP21.33■■□□□ 1.01
CCDC61-208ENST00000601763 COL5A3P25940 1745 aaPredicted RBP21.32■■□□□ 1
CCDC61-208ENST00000601763 RRP7AQ9Y3A4 280 aaKnown RBP21.32■■□□□ 1
CCDC61-208ENST00000601763 UBR3Q6ZT12 1888 aa21.32■■□□□ 1
CCDC61-208ENST00000601763 ZNF831Q5JPB2 1677 aa21.31■■□□□ 1
CCDC61-208ENST00000601763 TEFQ10587 303 aa21.31■■□□□ 1
CCDC61-208ENST00000601763 WDR43Q15061 677 aaKnown RBP eCLIP21.31■■□□□ 1
CCDC61-208ENST00000601763 UBR2Q8IWV8 1755 aa21.31■■□□□ 1
CCDC61-208ENST00000601763 ANP32CO43423 234 aa21.3■■□□□ 1
CCDC61-208ENST00000601763 PHF14O94880 888 aa21.3■■□□□ 1
CCDC61-208ENST00000601763 MYH14Q7Z406 1995 aaKnown RBP21.3■■□□□ 1
CCDC61-208ENST00000601763 MAPK8IP3Q9UPT6 1336 aa21.29■■□□□ 1
CCDC61-208ENST00000601763 PTGER2P43116 358 aa21.29■■□□□ 1
CCDC61-208ENST00000601763 DNAJC10Q8IXB1 793 aa21.29■■□□□ 1
CCDC61-208ENST00000601763 AK7Q96M32 723 aa21.29■■□□□ 1
CCDC61-208ENST00000601763 MIS18AQ9NYP9 233 aa21.29■■□□□ 1
CCDC61-208ENST00000601763 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
CCDC61-208ENST00000601763 GNPATO15228 680 aa21.28■■□□□ 1
CCDC61-208ENST00000601763 RTF1Q92541 710 aaKnown RBP21.28■■□□□ 1
CCDC61-208ENST00000601763 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
CCDC61-208ENST00000601763 TMPOP42166 694 aaKnown RBP21.27■■□□□ 1
CCDC61-208ENST00000601763 SPON1Q9HCB6 807 aa21.27■■□□□ 1
CCDC61-208ENST00000601763 CICQ96RK0 1608 aaPredicted RBP21.26■□□□□ 0.99
CCDC61-208ENST00000601763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.26■□□□□ 0.99
CCDC61-208ENST00000601763 MSH5O43196 834 aa21.26■□□□□ 0.99
CCDC61-208ENST00000601763 HTATSF1O43719 755 aaKnown RBP21.26■□□□□ 0.99
CCDC61-208ENST00000601763 NEUROD2Q15784 382 aa21.26■□□□□ 0.99
CCDC61-208ENST00000601763 ZNF790Q6PG37 636 aa21.26■□□□□ 0.99
CCDC61-208ENST00000601763 SGIP1Q9BQI5 828 aa21.26■□□□□ 0.99
CCDC61-208ENST00000601763 BTBD11A6QL63 1104 aa21.25■□□□□ 0.99
CCDC61-208ENST00000601763 NEFMP07197 916 aa21.25■□□□□ 0.99
CCDC61-208ENST00000601763 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
CCDC61-208ENST00000601763 RIPK4P57078 832 aa21.25■□□□□ 0.99
CCDC61-208ENST00000601763 MSL1Q68DK7 614 aa21.25■□□□□ 0.99
CCDC61-208ENST00000601763 RUNDC1Q96C34 613 aa21.25■□□□□ 0.99
CCDC61-208ENST00000601763 PRAMEF22A3QJZ6 481 aa21.24■□□□□ 0.99
CCDC61-208ENST00000601763 INTS5Q6P9B9 1019 aaKnown RBP21.24■□□□□ 0.99
CCDC61-208ENST00000601763 MTFR1LQ9H019 292 aa21.24■□□□□ 0.99
CCDC61-208ENST00000601763 PNNQ9H307 717 aaKnown RBP21.24■□□□□ 0.99
CCDC61-208ENST00000601763 MRS2Q9HD23 443 aa21.24■□□□□ 0.99
CCDC61-208ENST00000601763 CYP19A1P11511 503 aaPredicted RBP21.23■□□□□ 0.99
CCDC61-208ENST00000601763 PNISRQ8TF01 805 aaKnown RBP21.23■□□□□ 0.99
CCDC61-208ENST00000601763 CNTNAP4Q9C0A0 1308 aa21.23■□□□□ 0.99
CCDC61-208ENST00000601763 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
CCDC61-208ENST00000601763 TRIM35Q9UPQ4 493 aa21.22■□□□□ 0.99
CCDC61-208ENST00000601763 HEG1Q9ULI3 1381 aa21.22■□□□□ 0.99
CCDC61-208ENST00000601763 TAF7Q15545 349 aaPredicted RBP21.21■□□□□ 0.99
CCDC61-208ENST00000601763 RC3H1Q5TC82 1133 aaKnown RBP21.21■□□□□ 0.99
CCDC61-208ENST00000601763 COL24A1Q17RW2 1714 aa21.21■□□□□ 0.99
CCDC61-208ENST00000601763 RPS6KA4O75676 772 aa21.2■□□□□ 0.98
CCDC61-208ENST00000601763 KDM3BQ7LBC6 1761 aa21.19■□□□□ 0.98
CCDC61-208ENST00000601763 APAF1O14727 1248 aa21.19■□□□□ 0.98
CCDC61-208ENST00000601763 SSFA2P28290 1259 aa21.19■□□□□ 0.98
CCDC61-208ENST00000601763 ARHGEF1Q92888 912 aaKnown RBP21.19■□□□□ 0.98
CCDC61-208ENST00000601763 C4AP0C0L4 1744 aa21.18■□□□□ 0.98
CCDC61-208ENST00000601763 SLC16A10Q8TF71 515 aa21.18■□□□□ 0.98
CCDC61-208ENST00000601763 CCDC87Q9NVE4 849 aa21.18■□□□□ 0.98
CCDC61-208ENST00000601763 ZBTB1Q9Y2K1 713 aa21.18■□□□□ 0.98
CCDC61-208ENST00000601763 RTCBQ9Y3I0 505 aaKnown RBP21.18■□□□□ 0.98
CCDC61-208ENST00000601763 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
CCDC61-208ENST00000601763 FMNL2Q96PY5 1086 aa21.17■□□□□ 0.98
CCDC61-208ENST00000601763 USP16Q9Y5T5 823 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms