RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 SCAND2PQ9GZW5 306 aaPredicted RBP14.18□□□□□ -0.14
SHANK2-218ENST00000601538 MRVI1Q9Y6F6 885 aa14.18□□□□□ -0.14
SHANK2-218ENST00000601538 LMAN1P49257 510 aa14.18□□□□□ -0.14
SHANK2-218ENST00000601538 KIF4BQ2VIQ3 1234 aa14.18□□□□□ -0.14
SHANK2-218ENST00000601538 NACAP1Q9BZK3 213 aa14.18□□□□□ -0.14
SHANK2-218ENST00000601538 PRDM10Q9NQV6 1147 aa14.18□□□□□ -0.14
SHANK2-218ENST00000601538 SH2D4BQ5SQS7 431 aa14.18□□□□□ -0.14
SHANK2-218ENST00000601538 ZWINTO95229 277 aa14.17□□□□□ -0.14
SHANK2-218ENST00000601538 TTC14Q96N46 770 aa14.17□□□□□ -0.14
SHANK2-218ENST00000601538 KIF1CO43896 1103 aaKnown RBP14.17□□□□□ -0.14
SHANK2-218ENST00000601538 ARFGAP3Q9NP61 516 aa14.17□□□□□ -0.14
SHANK2-218ENST00000601538 EFCC1Q9HA90 598 aa14.17□□□□□ -0.14
SHANK2-218ENST00000601538 CCDC38Q502W7 563 aa14.17□□□□□ -0.14
SHANK2-218ENST00000601538 FBF1Q8TES7 1133 aa14.17□□□□□ -0.14
SHANK2-218ENST00000601538 ELL2O00472 640 aaPredicted RBP14.17□□□□□ -0.14
SHANK2-218ENST00000601538 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
SHANK2-218ENST00000601538 MROH2BQ7Z745 1585 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 HSF2BPO75031 334 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 HECW1Q76N89 1606 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHANK2-218ENST00000601538 TNNT1P13805 278 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 UBE4AQ14139 1066 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 PHAXQ9H814 394 aaKnown RBP14.16□□□□□ -0.14
SHANK2-218ENST00000601538 IBTKQ9P2D0 1353 aaPredicted RBP14.16□□□□□ -0.14
SHANK2-218ENST00000601538 SYCE3A1L190 88 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 CKAP4Q07065 602 aaKnown RBP14.16□□□□□ -0.14
SHANK2-218ENST00000601538 CCDC6Q16204 474 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 CEBPZQ03701 1054 aaKnown RBP14.16□□□□□ -0.14
SHANK2-218ENST00000601538 IKQ13123 557 aaPredicted RBP14.16□□□□□ -0.14
SHANK2-218ENST00000601538 ZSCAN25Q6NSZ9 544 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 USP25Q9UHP3 1055 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 CLIP2Q9UDT6 1046 aa14.16□□□□□ -0.14
SHANK2-218ENST00000601538 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
SHANK2-218ENST00000601538 EFCAB2Q5VUJ9 269 aa14.15□□□□□ -0.14
SHANK2-218ENST00000601538 CCDC69A6NI79 296 aa14.15□□□□□ -0.14
SHANK2-218ENST00000601538 SPATS2Q86XZ4 545 aaKnown RBP14.15□□□□□ -0.14
SHANK2-218ENST00000601538 GNL3LQ9NVN8 582 aaKnown RBP14.15□□□□□ -0.14
SHANK2-218ENST00000601538 GGT6Q6P531 493 aa14.15□□□□□ -0.14
SHANK2-218ENST00000601538 NEUROD6Q96NK8 337 aa14.15□□□□□ -0.14
SHANK2-218ENST00000601538 IFI16Q16666 785 aaKnown RBP14.15□□□□□ -0.14
SHANK2-218ENST00000601538 GBP6Q6ZN66 633 aa14.15□□□□□ -0.14
SHANK2-218ENST00000601538 CCDC97Q96F63 343 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-218ENST00000601538 DHX37Q8IY37 1157 aaKnown RBP14.15□□□□□ -0.14
SHANK2-218ENST00000601538 KIF5BP33176 963 aa14.15□□□□□ -0.15
SHANK2-218ENST00000601538 CCDC150Q8NCX0 1101 aa14.15□□□□□ -0.15
SHANK2-218ENST00000601538 SUDS3Q9H7L9 328 aaPredicted RBP14.15□□□□□ -0.15
SHANK2-218ENST00000601538 GNAI2P04899 355 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 URI1O94763 535 aaPredicted RBP14.14□□□□□ -0.15
SHANK2-218ENST00000601538 CCDC30Q5VVM6 783 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 FERMT1Q9BQL6 677 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 PLVAPQ9BX97 442 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 MYRIPQ8NFW9 859 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 CTNNA3Q9UI47 895 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 INSRP06213 1382 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 EIF2AK4Q9P2K8 1649 aaKnown RBP14.14□□□□□ -0.15
SHANK2-218ENST00000601538 CCDC155Q8N6L0 562 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 YEATS4O95619 227 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 CCDC178Q5BJE1 867 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 USH1CQ9Y6N9 552 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 CFAP43Q8NDM7 1665 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 TSG101Q99816 390 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 TSPYL4Q9UJ04 414 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 IKBKGQ9Y6K9 419 aa14.14□□□□□ -0.15
SHANK2-218ENST00000601538 B4GALNT4Q76KP1 1039 aa14.13□□□□□ -0.15
SHANK2-218ENST00000601538 RAI14Q9P0K7 980 aa14.13□□□□□ -0.15
SHANK2-218ENST00000601538 LTV1Q96GA3 475 aaPredicted RBP14.13□□□□□ -0.15
SHANK2-218ENST00000601538 CTCFLQ8NI51 663 aaPredicted RBP14.13□□□□□ -0.15
SHANK2-218ENST00000601538 OPA1O60313 960 aa14.13□□□□□ -0.15
SHANK2-218ENST00000601538 PANK1Q8TE04 598 aa14.13□□□□□ -0.15
SHANK2-218ENST00000601538 VGFO15240 615 aaPredicted RBP14.13□□□□□ -0.15
SHANK2-218ENST00000601538 PYM1Q9BRP8 204 aaKnown RBP14.13□□□□□ -0.15
SHANK2-218ENST00000601538 RIC3Q7Z5B4 369 aa14.12□□□□□ -0.15
SHANK2-218ENST00000601538 CCT4P50991 539 aaKnown RBP14.12□□□□□ -0.15
SHANK2-218ENST00000601538 TSNARE1Q96NA8 513 aa14.12□□□□□ -0.15
SHANK2-218ENST00000601538 ELP1O95163 1332 aa14.12□□□□□ -0.15
SHANK2-218ENST00000601538 FAM184BQ9ULE4 1060 aa14.12□□□□□ -0.15
SHANK2-218ENST00000601538 SNW1Q13573 536 aaKnown RBP14.12□□□□□ -0.15
SHANK2-218ENST00000601538 BLOC1S2Q6QNY1 142 aa14.12□□□□□ -0.15
SHANK2-218ENST00000601538 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■■■□□ 15.5
SHANK2-218ENST00000601538 EBAG9O00559 213 aa14.12□□□□□ -0.15
SHANK2-218ENST00000601538 STIM2Q9P246 746 aa14.12□□□□□ -0.15
SHANK2-218ENST00000601538 LARP1Q6PKG0 1096 aaKnown RBP14.11□□□□□ -0.15
SHANK2-218ENST00000601538 CACNA2D4Q7Z3S7 1137 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 HOMER2Q9NSB8 354 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 CCDC160A6NGH7 325 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 GOLIM4O00461 696 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 AIMP1Q12904 312 aaKnown RBP14.11□□□□□ -0.15
SHANK2-218ENST00000601538 SOGA3Q5TF21 947 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 C16orf45Q96MC5 204 aaPredicted RBP14.11□□□□□ -0.15
SHANK2-218ENST00000601538 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 TUBB2AQ13885 445 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 TUBB2BQ9BVA1 445 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 CAMSAP2Q08AD1 1489 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 ITSN2Q9NZM3 1697 aa14.11□□□□□ -0.15
SHANK2-218ENST00000601538 TACC1O75410 805 aa14.1□□□□□ -0.15
SHANK2-218ENST00000601538 SH2B1Q9NRF2 756 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-218ENST00000601538 MLECQ14165 292 aa14.1□□□□□ -0.15
SHANK2-218ENST00000601538 KIF4AO95239 1232 aa14.1□□□□□ -0.15
SHANK2-218ENST00000601538 ATP2B1P20020 1258 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms