RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 UBR3Q6ZT12 1888 aa24.7■■□□□ 1.54
CHMP2A-208ENST00000601220 GRIN3BO60391 1043 aa24.69■■□□□ 1.54
CHMP2A-208ENST00000601220 MORC1Q86VD1 984 aa24.69■■□□□ 1.54
CHMP2A-208ENST00000601220 KDRP35968 1356 aa24.68■■□□□ 1.54
CHMP2A-208ENST00000601220 AEBP1Q8IUX7 1158 aa24.68■■□□□ 1.54
CHMP2A-208ENST00000601220 DCAF5Q96JK2 942 aa24.68■■□□□ 1.54
CHMP2A-208ENST00000601220 PLEKHO1Q53GL0 409 aaPredicted RBP24.67■■□□□ 1.54
CHMP2A-208ENST00000601220 GNPATO15228 680 aa24.66■■□□□ 1.54
CHMP2A-208ENST00000601220 HSP90AB1P08238 724 aaKnown RBP24.66■■□□□ 1.54
CHMP2A-208ENST00000601220 KDM6AO15550 1401 aaPredicted RBP24.66■■□□□ 1.54
CHMP2A-208ENST00000601220 AMOTQ4VCS5 1084 aa24.65■■□□□ 1.54
CHMP2A-208ENST00000601220 AMER1Q5JTC6 1135 aaPredicted RBP24.65■■□□□ 1.54
CHMP2A-208ENST00000601220 IL13P35225 146 aa24.64■■□□□ 1.54
CHMP2A-208ENST00000601220 C1QTNF8P60827 252 aa24.64■■□□□ 1.54
CHMP2A-208ENST00000601220 ZNF530Q6P9A1 599 aaPredicted RBP24.64■■□□□ 1.54
CHMP2A-208ENST00000601220 KNSTRNQ9Y448 316 aa24.64■■□□□ 1.54
CHMP2A-208ENST00000601220 RC3H1Q5TC82 1133 aaKnown RBP24.61■■□□□ 1.53
CHMP2A-208ENST00000601220 SULT6B1Q6IMI4 303 aa24.61■■□□□ 1.53
CHMP2A-208ENST00000601220 RBM42Q9BTD8 480 aaKnown RBP24.6■■□□□ 1.53
CHMP2A-208ENST00000601220 KIF7Q2M1P5 1343 aa24.6■■□□□ 1.53
CHMP2A-208ENST00000601220 MTHFSP49914 203 aa24.59■■□□□ 1.53
CHMP2A-208ENST00000601220 CABP4P57796 275 aa24.59■■□□□ 1.53
CHMP2A-208ENST00000601220 TRAPPC3LQ5T215 181 aa24.58■■□□□ 1.53
CHMP2A-208ENST00000601220 RTCBQ9Y3I0 505 aaKnown RBP24.58■■□□□ 1.53
CHMP2A-208ENST00000601220 ZNF831Q5JPB2 1677 aa24.58■■□□□ 1.53
CHMP2A-208ENST00000601220 PER1O15534 1290 aaPredicted RBP24.57■■□□□ 1.52
CHMP2A-208ENST00000601220 ARHGEF1Q92888 912 aaKnown RBP24.57■■□□□ 1.52
CHMP2A-208ENST00000601220 CNTNAP4Q9C0A0 1308 aa24.57■■□□□ 1.52
CHMP2A-208ENST00000601220 MMP10P09238 476 aa24.56■■□□□ 1.52
CHMP2A-208ENST00000601220 NFATC2IPQ8NCF5 419 aa24.56■■□□□ 1.52
CHMP2A-208ENST00000601220 RPS6KA4O75676 772 aa24.55■■□□□ 1.52
CHMP2A-208ENST00000601220 C1orf141Q5JVX7 400 aa24.55■■□□□ 1.52
CHMP2A-208ENST00000601220 GIGYF1O75420 1035 aaPredicted RBP24.54■■□□□ 1.52
CHMP2A-208ENST00000601220 ADRA2BP18089 450 aa24.54■■□□□ 1.52
CHMP2A-208ENST00000601220 NLGN1Q8N2Q7 840 aa24.53■■□□□ 1.52
CHMP2A-208ENST00000601220 ADCY9O60503 1353 aa24.53■■□□□ 1.52
CHMP2A-208ENST00000601220 PTCD1O75127 700 aaKnown RBP24.52■■□□□ 1.52
CHMP2A-208ENST00000601220 GYS1P13807 737 aa24.52■■□□□ 1.52
CHMP2A-208ENST00000601220 WWC3Q9ULE0 1092 aa24.52■■□□□ 1.52
CHMP2A-208ENST00000601220 ATP10DQ9P241 1426 aa24.52■■□□□ 1.52
CHMP2A-208ENST00000601220 COL5A3P25940 1745 aaPredicted RBP24.51■■□□□ 1.51
CHMP2A-208ENST00000601220 SENP3-EIF4A1A0A087X0R7 540 aa24.5■■□□□ 1.51
CHMP2A-208ENST00000601220 AKAP4Q5JQC9 854 aa24.49■■□□□ 1.51
CHMP2A-208ENST00000601220 LGR6Q9HBX8 967 aa24.49■■□□□ 1.51
CHMP2A-208ENST00000601220 PXDNLA1KZ92 1463 aa24.48■■□□□ 1.51
CHMP2A-208ENST00000601220 RFC4P35249 363 aa24.48■■□□□ 1.51
CHMP2A-208ENST00000601220 CRKLP46109 303 aaKnown RBP24.48■■□□□ 1.51
CHMP2A-208ENST00000601220 TGFB2P61812 414 aa24.47■■□□□ 1.51
CHMP2A-208ENST00000601220 CICQ96RK0 1608 aaPredicted RBP24.46■■□□□ 1.51
CHMP2A-208ENST00000601220 C10orf71Q711Q0 1435 aa24.46■■□□□ 1.51
CHMP2A-208ENST00000601220 MYH14Q7Z406 1995 aaKnown RBP24.46■■□□□ 1.51
CHMP2A-208ENST00000601220 INTS5Q6P9B9 1019 aaKnown RBP24.46■■□□□ 1.51
CHMP2A-208ENST00000601220 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
CHMP2A-208ENST00000601220 HMOX1P09601 288 aa24.45■■□□□ 1.5
CHMP2A-208ENST00000601220 KIAA1551Q9HCM1 1747 aa24.44■■□□□ 1.5
CHMP2A-208ENST00000601220 A0A0G2JLW4 131 aa24.44■■□□□ 1.5
CHMP2A-208ENST00000601220 RNMTO43148 476 aaKnown RBP24.44■■□□□ 1.5
CHMP2A-208ENST00000601220 CC2D1BQ5T0F9 858 aaKnown RBP24.44■■□□□ 1.5
CHMP2A-208ENST00000601220 KIF13BQ9NQT8 1826 aa24.44■■□□□ 1.5
CHMP2A-208ENST00000601220 MTHFSDQ2M296 383 aaKnown RBP24.43■■□□□ 1.5
CHMP2A-208ENST00000601220 SRP68Q9UHB9 627 aaKnown RBP24.43■■□□□ 1.5
CHMP2A-208ENST00000601220 TJP1Q07157 1748 aa24.42■■□□□ 1.5
CHMP2A-208ENST00000601220 DIAPH1O60610 1272 aaKnown RBP24.42■■□□□ 1.5
CHMP2A-208ENST00000601220 CCDC87Q9NVE4 849 aa24.42■■□□□ 1.5
CHMP2A-208ENST00000601220 SCN11AQ9UI33 1791 aa24.42■■□□□ 1.5
CHMP2A-208ENST00000601220 USP42Q9H9J4 1324 aaKnown RBP24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 MRC1P22897 1456 aa24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 DPEP1P16444 411 aa24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 FKBP8Q14318 412 aa24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 DNAJC10Q8IXB1 793 aa24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 GPBP1L1Q9HC44 474 aaPredicted RBP24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 PARP3Q9Y6F1 533 aa24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 C4AP0C0L4 1744 aa24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 NPC1L1Q9UHC9 1359 aa24.41■■□□□ 1.5
CHMP2A-208ENST00000601220 KCNA3P22001 575 aa24.4■■□□□ 1.5
CHMP2A-208ENST00000601220 SLC39A6Q13433 755 aa24.4■■□□□ 1.5
CHMP2A-208ENST00000601220 DDR1Q08345 913 aa24.39■■□□□ 1.49
CHMP2A-208ENST00000601220 CYP19A1P11511 503 aaPredicted RBP24.38■■□□□ 1.49
CHMP2A-208ENST00000601220 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
CHMP2A-208ENST00000601220 ADAMTS7Q9UKP4 1686 aa24.37■■□□□ 1.49
CHMP2A-208ENST00000601220 TM4SF1P30408 202 aa24.37■■□□□ 1.49
CHMP2A-208ENST00000601220 ZNF526Q8TF50 670 aaPredicted RBP24.37■■□□□ 1.49
CHMP2A-208ENST00000601220 BCS1LQ9Y276 419 aa24.37■■□□□ 1.49
CHMP2A-208ENST00000601220 SOS1Q07889 1333 aaPredicted RBP24.36■■□□□ 1.49
CHMP2A-208ENST00000601220 N4BP2Q86UW6 1770 aaPredicted RBP24.36■■□□□ 1.49
CHMP2A-208ENST00000601220 KCPQ6ZWJ8 1503 aa24.35■■□□□ 1.49
CHMP2A-208ENST00000601220 POLRMTO00411 1230 aaKnown RBP24.33■■□□□ 1.49
CHMP2A-208ENST00000601220 VSIG10Q8N0Z9 540 aa24.33■■□□□ 1.49
CHMP2A-208ENST00000601220 KIF3CO14782 793 aa24.32■■□□□ 1.48
CHMP2A-208ENST00000601220 USPL1Q5W0Q7 1092 aa24.32■■□□□ 1.48
CHMP2A-208ENST00000601220 FCHSD2O94868 740 aa24.31■■□□□ 1.48
CHMP2A-208ENST00000601220 ARHGAP27Q6ZUM4 889 aa24.31■■□□□ 1.48
CHMP2A-208ENST00000601220 IL17REQ8NFR9 667 aa24.31■■□□□ 1.48
CHMP2A-208ENST00000601220 ZBTB1Q9Y2K1 713 aa24.31■■□□□ 1.48
CHMP2A-208ENST00000601220 BCL2L12Q9HB09 334 aa24.3■■□□□ 1.48
CHMP2A-208ENST00000601220 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
CHMP2A-208ENST00000601220 ZPR1O75312 459 aa24.29■■□□□ 1.48
CHMP2A-208ENST00000601220 PIM2Q9P1W9 311 aa24.29■■□□□ 1.48
CHMP2A-208ENST00000601220 BRCA1P38398 1863 aaKnown RBP24.28■■□□□ 1.48
CHMP2A-208ENST00000601220 U2SURPO15042 1029 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms