RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 CEMIPQ8WUJ3 1361 aa27.01■■□□□ 1.91
SIN3B-211ENST00000601141 MRC1P22897 1456 aa27■■□□□ 1.91
SIN3B-211ENST00000601141 DEFB132Q7Z7B7 95 aa26.99■■□□□ 1.91
SIN3B-211ENST00000601141 THUMPD2Q9BTF0 503 aaKnown RBP26.99■■□□□ 1.91
SIN3B-211ENST00000601141 EN1Q05925 392 aaPredicted RBP26.97■■□□□ 1.91
SIN3B-211ENST00000601141 TRIM35Q9UPQ4 493 aa26.96■■□□□ 1.91
SIN3B-211ENST00000601141 ASAP1Q9ULH1 1129 aa26.95■■□□□ 1.91
SIN3B-211ENST00000601141 PLSCR1O15162 318 aa26.94■■□□□ 1.9
SIN3B-211ENST00000601141 SALL2Q9Y467 1007 aaPredicted RBP26.94■■□□□ 1.9
SIN3B-211ENST00000601141 SMARCC1Q92922 1105 aaPredicted RBP26.93■■□□□ 1.9
SIN3B-211ENST00000601141 PALLDQ8WX93 1383 aa26.93■■□□□ 1.9
SIN3B-211ENST00000601141 ATG3Q9NT62 314 aa26.93■■□□□ 1.9
SIN3B-211ENST00000601141 EZH2Q15910 746 aaKnown RBP26.92■■□□□ 1.9
SIN3B-211ENST00000601141 SIPA1L3O60292 1781 aaPredicted RBP26.91■■□□□ 1.9
SIN3B-211ENST00000601141 SLC39A6Q13433 755 aa26.91■■□□□ 1.9
SIN3B-211ENST00000601141 CAMKK2Q96RR4 588 aa26.91■■□□□ 1.9
SIN3B-211ENST00000601141 BTBD11A6QL63 1104 aa26.9■■□□□ 1.9
SIN3B-211ENST00000601141 RGPD3A6NKT7 1758 aaPredicted RBP26.89■■□□□ 1.9
SIN3B-211ENST00000601141 TAF7Q15545 349 aaPredicted RBP26.89■■□□□ 1.9
SIN3B-211ENST00000601141 RGPD4Q7Z3J3 1758 aa26.89■■□□□ 1.9
SIN3B-211ENST00000601141 TTC5Q8N0Z6 440 aa26.88■■□□□ 1.89
SIN3B-211ENST00000601141 TXNRD1Q16881 649 aa26.87■■□□□ 1.89
SIN3B-211ENST00000601141 CCDC27Q2M243 656 aa26.87■■□□□ 1.89
SIN3B-211ENST00000601141 RBM42Q9BTD8 480 aaKnown RBP26.87■■□□□ 1.89
SIN3B-211ENST00000601141 PAPPAQ13219 1627 aa26.86■■□□□ 1.89
SIN3B-211ENST00000601141 PTCD1O75127 700 aaKnown RBP26.86■■□□□ 1.89
SIN3B-211ENST00000601141 NCBP3Q53F19 620 aaKnown RBP26.86■■□□□ 1.89
SIN3B-211ENST00000601141 WWC1Q8IX03 1113 aa26.86■■□□□ 1.89
SIN3B-211ENST00000601141 MIS18AQ9NYP9 233 aa26.86■■□□□ 1.89
SIN3B-211ENST00000601141 CCNL1Q9UK58 526 aaPredicted RBP26.86■■□□□ 1.89
SIN3B-211ENST00000601141 LAS1LQ9Y4W2 734 aaKnown RBP26.86■■□□□ 1.89
SIN3B-211ENST00000601141 LY75O60449 1722 aa26.85■■□□□ 1.89
SIN3B-211ENST00000601141 CALD1Q05682 793 aaKnown RBP26.85■■□□□ 1.89
SIN3B-211ENST00000601141 ZNF790Q6PG37 636 aa26.85■■□□□ 1.89
SIN3B-211ENST00000601141 PROM2Q8N271 834 aa26.85■■□□□ 1.89
SIN3B-211ENST00000601141 NGEFQ8N5V2 710 aa26.85■■□□□ 1.89
SIN3B-211ENST00000601141 LOC102724428A0A0B4J2F2 783 aa26.84■■□□□ 1.89
SIN3B-211ENST00000601141 KCNQ4P56696 695 aa26.84■■□□□ 1.89
SIN3B-211ENST00000601141 SIK1P57059 783 aa26.84■■□□□ 1.89
SIN3B-211ENST00000601141 SLC27A3Q5K4L6 730 aa26.83■■□□□ 1.89
SIN3B-211ENST00000601141 TSPYL4Q9UJ04 414 aa26.82■■□□□ 1.88
SIN3B-211ENST00000601141 KCNQ3O43525 872 aa26.81■■□□□ 1.88
SIN3B-211ENST00000601141 RREB1Q92766 1687 aa26.81■■□□□ 1.88
SIN3B-211ENST00000601141 ATP6V1AP38606 617 aa26.81■■□□□ 1.88
SIN3B-211ENST00000601141 LRRC4BQ9NT99 713 aa26.81■■□□□ 1.88
SIN3B-211ENST00000601141 KCPQ6ZWJ8 1503 aa26.81■■□□□ 1.88
SIN3B-211ENST00000601141 ZNF496Q96IT1 587 aaPredicted RBP26.79■■□□□ 1.88
SIN3B-211ENST00000601141 UBR2Q8IWV8 1755 aa26.79■■□□□ 1.88
SIN3B-211ENST00000601141 KDM3BQ7LBC6 1761 aa26.78■■□□□ 1.88
SIN3B-211ENST00000601141 CFAP44Q96MT7 982 aa26.78■■□□□ 1.88
SIN3B-211ENST00000601141 FMNL2Q96PY5 1086 aa26.78■■□□□ 1.88
SIN3B-211ENST00000601141 SLC4A9Q96Q91 983 aa26.78■■□□□ 1.88
SIN3B-211ENST00000601141 IFT57Q9NWB7 429 aa26.78■■□□□ 1.88
SIN3B-211ENST00000601141 BABAM1Q9NWV8 329 aa26.78■■□□□ 1.88
SIN3B-211ENST00000601141 HNRNPUQ00839 825 aaKnown RBP eCLIP26.77■■□□□ 1.88
SIN3B-211ENST00000601141 NUP188Q5SRE5 1749 aa26.77■■□□□ 1.88
SIN3B-211ENST00000601141 CHL1O00533 1208 aa26.76■■□□□ 1.87
SIN3B-211ENST00000601141 GNAI1P63096 354 aa26.76■■□□□ 1.87
SIN3B-211ENST00000601141 WDR63Q8IWG1 891 aa26.75■■□□□ 1.87
SIN3B-211ENST00000601141 ITPK1Q13572 414 aa26.74■■□□□ 1.87
SIN3B-211ENST00000601141 HEG1Q9ULI3 1381 aa26.74■■□□□ 1.87
SIN3B-211ENST00000601141 ZNF853P0CG23 659 aa26.74■■□□□ 1.87
SIN3B-211ENST00000601141 MBIPQ9NS73 344 aa26.74■■□□□ 1.87
SIN3B-211ENST00000601141 IL16Q14005 1332 aa26.73■■□□□ 1.87
SIN3B-211ENST00000601141 VSIG10Q8N0Z9 540 aa26.73■■□□□ 1.87
SIN3B-211ENST00000601141 C5P01031 1676 aa26.73■■□□□ 1.87
SIN3B-211ENST00000601141 ZNF831Q5JPB2 1677 aa26.73■■□□□ 1.87
SIN3B-211ENST00000601141 ZNF521Q96K83 1311 aa26.73■■□□□ 1.87
SIN3B-211ENST00000601141 EIF4A1P60842 406 aaKnown RBP26.72■■□□□ 1.87
SIN3B-211ENST00000601141 LINC00116Q8NCU8 138 aa26.72■■□□□ 1.87
SIN3B-211ENST00000601141 HMGB2P26583 209 aaKnown RBP26.71■■□□□ 1.87
SIN3B-211ENST00000601141 NBPF14Q5TI25 921 aa26.71■■□□□ 1.87
SIN3B-211ENST00000601141 DNAJC10Q8IXB1 793 aa26.71■■□□□ 1.87
SIN3B-211ENST00000601141 TJP1Q07157 1748 aa26.71■■□□□ 1.87
SIN3B-211ENST00000601141 SNRPA1P09661 255 aaKnown RBP26.69■■□□□ 1.86
SIN3B-211ENST00000601141 TSR2Q969E8 191 aaKnown RBP26.69■■□□□ 1.86
SIN3B-211ENST00000601141 ANO8Q9HCE9 1232 aaPredicted RBP26.69■■□□□ 1.86
SIN3B-211ENST00000601141 TAF1LQ8IZX4 1826 aa26.69■■□□□ 1.86
SIN3B-211ENST00000601141 STK32BQ9NY57 414 aa26.68■■□□□ 1.86
SIN3B-211ENST00000601141 CICQ96RK0 1608 aaPredicted RBP26.68■■□□□ 1.86
SIN3B-211ENST00000601141 C4BP0C0L5 1744 aa26.67■■□□□ 1.86
SIN3B-211ENST00000601141 PRAMEF22A3QJZ6 481 aa26.67■■□□□ 1.86
SIN3B-211ENST00000601141 GOLGA2Q08379 1002 aa26.67■■□□□ 1.86
SIN3B-211ENST00000601141 ZNF827Q17R98 1081 aa26.67■■□□□ 1.86
SIN3B-211ENST00000601141 AK7Q96M32 723 aa26.67■■□□□ 1.86
SIN3B-211ENST00000601141 TEX13AQ9BXU3 409 aaPredicted RBP26.67■■□□□ 1.86
SIN3B-211ENST00000601141 COL5A3P25940 1745 aaPredicted RBP26.66■■□□□ 1.86
SIN3B-211ENST00000601141 SPINK5Q9NQ38 1064 aaPredicted RBP26.66■■□□□ 1.86
SIN3B-211ENST00000601141 GIGYF1O75420 1035 aaPredicted RBP26.65■■□□□ 1.86
SIN3B-211ENST00000601141 STARD3NLO95772 234 aa26.65■■□□□ 1.86
SIN3B-211ENST00000601141 KRT24Q2M2I5 525 aa26.65■■□□□ 1.86
SIN3B-211ENST00000601141 AKT1S1Q96B36 256 aa26.65■■□□□ 1.86
SIN3B-211ENST00000601141 MYH16Q9H6N6 1097 aa26.65■■□□□ 1.86
SIN3B-211ENST00000601141 FANCIQ9NVI1 1328 aa26.64■■□□□ 1.86
SIN3B-211ENST00000601141 CYP19A1P11511 503 aaPredicted RBP26.64■■□□□ 1.86
SIN3B-211ENST00000601141 CRKLP46109 303 aaKnown RBP26.64■■□□□ 1.86
SIN3B-211ENST00000601141 SLC15A2Q16348 729 aa26.64■■□□□ 1.86
SIN3B-211ENST00000601141 CNTNAP4Q9C0A0 1308 aa26.63■■□□□ 1.85
SIN3B-211ENST00000601141 TFCP2L1Q9NZI6 479 aa26.63■■□□□ 1.85
SIN3B-211ENST00000601141 USP16Q9Y5T5 823 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms