RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	PLEKHG2	Q9H7P9	1386 aa		29.37	■■■□□ 2.29
FARP1-231	ENST00000600648	IL13	P35225	146 aa		29.36	■■■□□ 2.29
FARP1-231	ENST00000600648	AMOT	Q4VCS5	1084 aa		29.36	■■■□□ 2.29
FARP1-231	ENST00000600648	DCAF5	Q96JK2	942 aa		29.36	■■■□□ 2.29
FARP1-231	ENST00000600648	ERVV-2	B6SEH9	535 aa		29.35	■■■□□ 2.29
FARP1-231	ENST00000600648	CNGB1	Q14028	1251 aa	Predicted RBP	29.35	■■■□□ 2.29
FARP1-231	ENST00000600648	CC2D1B	Q5T0F9	858 aa	Known RBP	29.35	■■■□□ 2.29
FARP1-231	ENST00000600648	GNPAT	O15228	680 aa		29.34	■■■□□ 2.29
FARP1-231	ENST00000600648	RBM42	Q9BTD8	480 aa	Known RBP	29.34	■■■□□ 2.29
FARP1-231	ENST00000600648	MTHFS	P49914	203 aa		29.33	■■■□□ 2.29
FARP1-231	ENST00000600648	CABP4	P57796	275 aa		29.33	■■■□□ 2.29
FARP1-231	ENST00000600648	C1orf141	Q5JVX7	400 aa		29.33	■■■□□ 2.29
FARP1-231	ENST00000600648	KDM6A	O15550	1401 aa	Predicted RBP	29.33	■■■□□ 2.29
FARP1-231	ENST00000600648	GOLGB1	Q14789	3259 aa	Known RBP	29.32	■■■□□ 2.28
FARP1-231	ENST00000600648	UBR3	Q6ZT12	1888 aa		29.31	■■■□□ 2.28
FARP1-231	ENST00000600648	SSFA2	P28290	1259 aa		29.31	■■■□□ 2.28
FARP1-231	ENST00000600648	PER1	O15534	1290 aa	Predicted RBP	29.3	■■■□□ 2.28
FARP1-231	ENST00000600648	SLC4A9	Q96Q91	983 aa		29.3	■■■□□ 2.28
FARP1-231	ENST00000600648	ZNF784	Q8NCA9	323 aa	Predicted RBP	29.29	■■■□□ 2.28
FARP1-231	ENST00000600648	KDR	P35968	1356 aa		29.28	■■■□□ 2.28
FARP1-231	ENST00000600648	HMOX1	P09601	288 aa		29.26	■■■□□ 2.27
FARP1-231	ENST00000600648	YBX3	P16989	372 aa	Known RBP eCLIP	29.25	■■■□□ 2.27
FARP1-231	ENST00000600648	NFATC2IP	Q8NCF5	419 aa		29.25	■■■□□ 2.27
FARP1-231	ENST00000600648	CHD4	Q14839	1912 aa		29.25	■■■□□ 2.27
FARP1-231	ENST00000600648	PTCD1	O75127	700 aa	Known RBP	29.24	■■■□□ 2.27
FARP1-231	ENST00000600648	CD2AP	Q9Y5K6	639 aa		29.24	■■■□□ 2.27
FARP1-231	ENST00000600648	RTCB	Q9Y3I0	505 aa	Known RBP	29.22	■■■□□ 2.27
FARP1-231	ENST00000600648	DIAPH1	O60610	1272 aa	Known RBP	29.2	■■■□□ 2.26
FARP1-231	ENST00000600648	WWC3	Q9ULE0	1092 aa		29.2	■■■□□ 2.26
FARP1-231	ENST00000600648	AKAP4	Q5JQC9	854 aa		29.19	■■■□□ 2.26
FARP1-231	ENST00000600648	TRAPPC3L	Q5T215	181 aa		29.19	■■■□□ 2.26
FARP1-231	ENST00000600648	GRIN3B	O60391	1043 aa		29.17	■■■□□ 2.26
FARP1-231	ENST00000600648	RC3H1	Q5TC82	1133 aa	Known RBP	29.17	■■■□□ 2.26
FARP1-231	ENST00000600648	LGR6	Q9HBX8	967 aa		29.17	■■■□□ 2.26
FARP1-231	ENST00000600648	MMP10	P09238	476 aa		29.16	■■■□□ 2.26
FARP1-231	ENST00000600648	CNTNAP4	Q9C0A0	1308 aa		29.16	■■■□□ 2.26
FARP1-231	ENST00000600648	ARHGEF1	Q92888	912 aa	Known RBP	29.15	■■■□□ 2.26
FARP1-231	ENST00000600648	MTHFSD	Q2M296	383 aa	Known RBP	29.14	■■■□□ 2.26
FARP1-231	ENST00000600648	ZNF831	Q5JPB2	1677 aa		29.13	■■■□□ 2.25
FARP1-231	ENST00000600648	RPS6KA4	O75676	772 aa		29.13	■■■□□ 2.25
FARP1-231	ENST00000600648	NPC1L1	Q9UHC9	1359 aa		29.13	■■■□□ 2.25
FARP1-231	ENST00000600648	COL5A3	P25940	1745 aa	Predicted RBP	29.12	■■■□□ 2.25
FARP1-231	ENST00000600648	SCN11A	Q9UI33	1791 aa		29.12	■■■□□ 2.25
FARP1-231	ENST00000600648	U2SURP	O15042	1029 aa	Known RBP	29.12	■■■□□ 2.25
FARP1-231	ENST00000600648	RNMT	O43148	476 aa	Known RBP	29.12	■■■□□ 2.25
FARP1-231	ENST00000600648	RFC4	P35249	363 aa		29.12	■■■□□ 2.25
FARP1-231	ENST00000600648	SLC52A2	Q9HAB3	445 aa		29.12	■■■□□ 2.25
FARP1-231	ENST00000600648	ADRA2B	P18089	450 aa		29.11	■■■□□ 2.25
FARP1-231	ENST00000600648	CRKL	P46109	303 aa	Known RBP	29.11	■■■□□ 2.25
FARP1-231	ENST00000600648	SLC39A6	Q13433	755 aa		29.09	■■■□□ 2.25
FARP1-231	ENST00000600648	NLGN1	Q8N2Q7	840 aa		29.09	■■■□□ 2.25
FARP1-231	ENST00000600648	MYH14	Q7Z406	1995 aa	Known RBP	29.08	■■■□□ 2.25
FARP1-231	ENST00000600648	GYS1	P13807	737 aa		29.08	■■■□□ 2.25
FARP1-231	ENST00000600648	COL3A1	P02461	1466 aa	Predicted RBP	29.08	■■■□□ 2.25
FARP1-231	ENST00000600648	DNAJC10	Q8IXB1	793 aa		29.06	■■■□□ 2.24
FARP1-231	ENST00000600648	SRP68	Q9UHB9	627 aa	Known RBP	29.06	■■■□□ 2.24
FARP1-231	ENST00000600648	TJP1	Q07157	1748 aa		29.05	■■■□□ 2.24
FARP1-231	ENST00000600648	CIC	Q96RK0	1608 aa	Predicted RBP	29.04	■■■□□ 2.24
FARP1-231	ENST00000600648	INTS5	Q6P9B9	1019 aa	Known RBP	29.03	■■■□□ 2.24
FARP1-231	ENST00000600648	MRC1	P22897	1456 aa		29.03	■■■□□ 2.24
FARP1-231	ENST00000600648	PARP3	Q9Y6F1	533 aa		29.01	■■■□□ 2.23
FARP1-231	ENST00000600648	C4A	P0C0L4	1744 aa		29	■■■□□ 2.23
FARP1-231	ENST00000600648	CCDC87	Q9NVE4	849 aa		29	■■■□□ 2.23
FARP1-231	ENST00000600648	FKBP8	Q14318	412 aa		28.99	■■■□□ 2.23
FARP1-231	ENST00000600648	CFAP53	Q96M91	514 aa		28.99	■■■□□ 2.23
FARP1-231	ENST00000600648	PXDNL	A1KZ92	1463 aa		28.98	■■■□□ 2.23
FARP1-231	ENST00000600648	USP42	Q9H9J4	1324 aa	Known RBP	28.98	■■■□□ 2.23
FARP1-231	ENST00000600648		A0A0G2JLW4	131 aa		28.98	■■■□□ 2.23
FARP1-231	ENST00000600648	VIRMA	Q69YN4	1812 aa	Known RBP	28.98	■■■□□ 2.23
FARP1-231	ENST00000600648	CYP19A1	P11511	503 aa	Predicted RBP	28.97	■■■□□ 2.23
FARP1-231	ENST00000600648	GAS2L2	Q8NHY3	880 aa		28.97	■■■□□ 2.23
FARP1-231	ENST00000600648	KCP	Q6ZWJ8	1503 aa		28.97	■■■□□ 2.23
FARP1-231	ENST00000600648	C10orf71	Q711Q0	1435 aa		28.96	■■■□□ 2.23
FARP1-231	ENST00000600648	GIGYF1	O75420	1035 aa	Predicted RBP	28.96	■■■□□ 2.23
FARP1-231	ENST00000600648	C1QTNF8	P60827	252 aa		28.96	■■■□□ 2.23
FARP1-231	ENST00000600648	GNAT3	A8MTJ3	354 aa		28.95	■■■□□ 2.22
FARP1-231	ENST00000600648	TGFB2	P61812	414 aa		28.95	■■■□□ 2.22
FARP1-231	ENST00000600648	IL17RE	Q8NFR9	667 aa		28.95	■■■□□ 2.22
FARP1-231	ENST00000600648	ADAMTS7	Q9UKP4	1686 aa		28.95	■■■□□ 2.22
FARP1-231	ENST00000600648	ATP10D	Q9P241	1426 aa		28.94	■■■□□ 2.22
FARP1-231	ENST00000600648	PRKAR2B	P31323	418 aa		28.94	■■■□□ 2.22
FARP1-231	ENST00000600648	TEF	Q10587	303 aa		28.94	■■■□□ 2.22
FARP1-231	ENST00000600648	TTC5	Q8N0Z6	440 aa		28.94	■■■□□ 2.22
FARP1-231	ENST00000600648	SOS1	Q07889	1333 aa	Predicted RBP	28.94	■■■□□ 2.22
FARP1-231	ENST00000600648	ZPR1	O75312	459 aa		28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	DPEP1	P16444	411 aa		28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	PPP2R1A	P30153	589 aa		28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	DDR1	Q08345	913 aa		28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	USPL1	Q5W0Q7	1092 aa		28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	PHACTR3	Q96KR7	559 aa		28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	BCS1L	Q9Y276	419 aa		28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	ZBTB1	Q9Y2K1	713 aa		28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.93	■■■□□ 2.22
FARP1-231	ENST00000600648	KIF13B	Q9NQT8	1826 aa		28.92	■■■□□ 2.22
FARP1-231	ENST00000600648	ZNF526	Q8TF50	670 aa	Predicted RBP	28.91	■■■□□ 2.22
FARP1-231	ENST00000600648	RSPH6A	Q9H0K4	717 aa		28.91	■■■□□ 2.22
FARP1-231	ENST00000600648	NUDC	Q9Y266	331 aa		28.91	■■■□□ 2.22
FARP1-231	ENST00000600648	KIAA1551	Q9HCM1	1747 aa		28.9	■■■□□ 2.22
FARP1-231	ENST00000600648	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.89	■■■□□ 2.22
FARP1-231	ENST00000600648	CANX	P27824	592 aa	Known RBP	28.89	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms