RNA–Protein interactions for RNA: ENST00000599551.5

UBA52-213, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBA52, Length 707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-213ENST00000599551 C10orf71Q711Q0 1435 aa16.45■□□□□ 0.22
UBA52-213ENST00000599551 SMIM5Q71RC9 77 aa16.45■□□□□ 0.22
UBA52-213ENST00000599551 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
UBA52-213ENST00000599551 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
UBA52-213ENST00000599551 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
UBA52-213ENST00000599551 BCS1LQ9Y276 419 aa16.44■□□□□ 0.22
UBA52-213ENST00000599551 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
UBA52-213ENST00000599551 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
UBA52-213ENST00000599551 SBF1O95248 1867 aa16.42■□□□□ 0.22
UBA52-213ENST00000599551 ITPK1Q13572 414 aa16.42■□□□□ 0.22
UBA52-213ENST00000599551 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
UBA52-213ENST00000599551 NMRK2Q9NPI5 230 aa16.42■□□□□ 0.22
UBA52-213ENST00000599551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBA52-213ENST00000599551 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
UBA52-213ENST00000599551 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
UBA52-213ENST00000599551 TMF1P82094 1093 aa16.4■□□□□ 0.22
UBA52-213ENST00000599551 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
UBA52-213ENST00000599551 ASAP1Q9ULH1 1129 aa16.4■□□□□ 0.22
UBA52-213ENST00000599551 RTCBQ9Y3I0 505 aaKnown RBP16.4■□□□□ 0.22
UBA52-213ENST00000599551 KDRP35968 1356 aa16.39■□□□□ 0.21
UBA52-213ENST00000599551 MYH14Q7Z406 1995 aaKnown RBP16.39■□□□□ 0.21
UBA52-213ENST00000599551 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
UBA52-213ENST00000599551 FCHSD2O94868 740 aa16.39■□□□□ 0.21
UBA52-213ENST00000599551 ADRA2BP18089 450 aa16.39■□□□□ 0.21
UBA52-213ENST00000599551 FSTL1Q12841 308 aa16.39■□□□□ 0.21
UBA52-213ENST00000599551 TRAPPC3LQ5T215 181 aa16.39■□□□□ 0.21
UBA52-213ENST00000599551 KLRG1Q96E93 195 aa16.39■□□□□ 0.21
UBA52-213ENST00000599551 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
UBA52-213ENST00000599551 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
UBA52-213ENST00000599551 EMILIN1Q9Y6C2 1016 aa16.38■□□□□ 0.21
UBA52-213ENST00000599551 DPEP1P16444 411 aa16.37■□□□□ 0.21
UBA52-213ENST00000599551 CDCA8Q53HL2 280 aa16.37■□□□□ 0.21
UBA52-213ENST00000599551 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
UBA52-213ENST00000599551 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
UBA52-213ENST00000599551 KDM2BQ8NHM5 1336 aa16.37■□□□□ 0.21
UBA52-213ENST00000599551 PHKG2P15735 406 aa16.36■□□□□ 0.21
UBA52-213ENST00000599551 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
UBA52-213ENST00000599551 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
UBA52-213ENST00000599551 PPM1GO15355 546 aaPredicted RBP16.35■□□□□ 0.21
UBA52-213ENST00000599551 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
UBA52-213ENST00000599551 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
UBA52-213ENST00000599551 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
UBA52-213ENST00000599551 GYS1P13807 737 aa16.34■□□□□ 0.21
UBA52-213ENST00000599551 RFC4P35249 363 aa16.34■□□□□ 0.21
UBA52-213ENST00000599551 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
UBA52-213ENST00000599551 EYA1Q99502 592 aa16.34■□□□□ 0.21
UBA52-213ENST00000599551 COL13A1Q5TAT6 717 aaPredicted RBP16.33■□□□□ 0.2
UBA52-213ENST00000599551 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
UBA52-213ENST00000599551 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
UBA52-213ENST00000599551 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
UBA52-213ENST00000599551 DCAF5Q96JK2 942 aa16.32■□□□□ 0.2
UBA52-213ENST00000599551 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
UBA52-213ENST00000599551 ERVV-2B6SEH9 535 aa16.31■□□□□ 0.2
UBA52-213ENST00000599551 HSP90AB1P08238 724 aaKnown RBP16.31■□□□□ 0.2
UBA52-213ENST00000599551 KCNA3P22001 575 aa16.31■□□□□ 0.2
UBA52-213ENST00000599551 HTRA3P83110 453 aa16.31■□□□□ 0.2
UBA52-213ENST00000599551 DALRD3Q5D0E6 543 aaKnown RBP16.31■□□□□ 0.2
UBA52-213ENST00000599551 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
UBA52-213ENST00000599551 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
UBA52-213ENST00000599551 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
UBA52-213ENST00000599551 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
UBA52-213ENST00000599551 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
UBA52-213ENST00000599551 TJP1Q07157 1748 aa16.3■□□□□ 0.2
UBA52-213ENST00000599551 ZC3H4Q9UPT8 1303 aaKnown RBP16.29■□□□□ 0.2
UBA52-213ENST00000599551 TIAM2Q8IVF5 1701 aa16.29■□□□□ 0.2
UBA52-213ENST00000599551 CARD14Q9BXL6 1004 aa16.29■□□□□ 0.2
UBA52-213ENST00000599551 PCNTO95613 3336 aa16.29■□□□□ 0.2
UBA52-213ENST00000599551 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
UBA52-213ENST00000599551 CAPN15O75808 1086 aa16.28■□□□□ 0.2
UBA52-213ENST00000599551 PRELPP51888 382 aa16.28■□□□□ 0.2
UBA52-213ENST00000599551 RRAGCQ9HB90 399 aa16.28■□□□□ 0.2
UBA52-213ENST00000599551 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.2
UBA52-213ENST00000599551 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.2
UBA52-213ENST00000599551 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
UBA52-213ENST00000599551 USP42Q9H9J4 1324 aaKnown RBP16.26■□□□□ 0.19
UBA52-213ENST00000599551 POLKQ9UBT6 870 aa16.26■□□□□ 0.19
UBA52-213ENST00000599551 CABP4P57796 275 aa16.25■□□□□ 0.19
UBA52-213ENST00000599551 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
UBA52-213ENST00000599551 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
UBA52-213ENST00000599551 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
UBA52-213ENST00000599551 DICER1Q9UPY3 1922 aaKnown RBP16.24■□□□□ 0.19
UBA52-213ENST00000599551 CRKLP46109 303 aaKnown RBP16.24■□□□□ 0.19
UBA52-213ENST00000599551 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
UBA52-213ENST00000599551 DDR1Q08345 913 aa16.23■□□□□ 0.19
UBA52-213ENST00000599551 FKBP8Q14318 412 aa16.23■□□□□ 0.19
UBA52-213ENST00000599551 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
UBA52-213ENST00000599551 CHRNA5P30532 468 aa16.22■□□□□ 0.19
UBA52-213ENST00000599551 ZNF530Q6P9A1 599 aaPredicted RBP16.22■□□□□ 0.19
UBA52-213ENST00000599551 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
UBA52-213ENST00000599551 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
UBA52-213ENST00000599551 VEGFAP15692 232 aaPredicted RBP16.21■□□□□ 0.19
UBA52-213ENST00000599551 POLRMTO00411 1230 aaKnown RBP16.2■□□□□ 0.18
UBA52-213ENST00000599551 HSPA1AP0DMV8 641 aaKnown RBP16.2■□□□□ 0.18
UBA52-213ENST00000599551 HSPA1BP0DMV9 641 aaKnown RBP16.2■□□□□ 0.18
UBA52-213ENST00000599551 LMNB1P20700 586 aa16.2■□□□□ 0.18
UBA52-213ENST00000599551 MTHFSP49914 203 aa16.2■□□□□ 0.18
UBA52-213ENST00000599551 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
UBA52-213ENST00000599551 GLTPD2A6NH11 291 aa16.19■□□□□ 0.18
UBA52-213ENST00000599551 ZPR1O75312 459 aa16.19■□□□□ 0.18
UBA52-213ENST00000599551 RASSF7Q02833 373 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms