RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 SSFA2P28290 1259 aa15.2■□□□□ 0.02
GRAMD1A-209ENST00000598580 KDRP35968 1356 aa15.2■□□□□ 0.02
GRAMD1A-209ENST00000598580 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
GRAMD1A-209ENST00000598580 KDM6AO15550 1401 aaPredicted RBP15.18■□□□□ 0.02
GRAMD1A-209ENST00000598580 ERVV-2B6SEH9 535 aa15.18■□□□□ 0.02
GRAMD1A-209ENST00000598580 SENP3-EIF4A1A0A087X0R7 540 aa15.17■□□□□ 0.02
GRAMD1A-209ENST00000598580 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
GRAMD1A-209ENST00000598580 IL13P35225 146 aa15.16■□□□□ 0.02
GRAMD1A-209ENST00000598580 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
GRAMD1A-209ENST00000598580 ZNF530Q6P9A1 599 aaPredicted RBP15.16■□□□□ 0.02
GRAMD1A-209ENST00000598580 MORC1Q86VD1 984 aa15.16■□□□□ 0.02
GRAMD1A-209ENST00000598580 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
GRAMD1A-209ENST00000598580 GIGYF1O75420 1035 aaPredicted RBP15.15■□□□□ 0.02
GRAMD1A-209ENST00000598580 MMP10P09238 476 aa15.15■□□□□ 0.02
GRAMD1A-209ENST00000598580 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
GRAMD1A-209ENST00000598580 ARHGEF1Q92888 912 aaKnown RBP15.15■□□□□ 0.02
GRAMD1A-209ENST00000598580 ATP10DQ9P241 1426 aa15.15■□□□□ 0.02
GRAMD1A-209ENST00000598580 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
GRAMD1A-209ENST00000598580 ADCY9O60503 1353 aa15.14■□□□□ 0.01
GRAMD1A-209ENST00000598580 HMGB2P26583 209 aaKnown RBP15.14■□□□□ 0.01
GRAMD1A-209ENST00000598580 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
GRAMD1A-209ENST00000598580 GYS1P13807 737 aa15.13■□□□□ 0.01
GRAMD1A-209ENST00000598580 CABP4P57796 275 aa15.13■□□□□ 0.01
GRAMD1A-209ENST00000598580 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
GRAMD1A-209ENST00000598580 RC3H1Q5TC82 1133 aaKnown RBP15.13■□□□□ 0.01
GRAMD1A-209ENST00000598580 NFATC2IPQ8NCF5 419 aa15.13■□□□□ 0.01
GRAMD1A-209ENST00000598580 PLEKHG2Q9H7P9 1386 aa15.12■□□□□ 0.01
GRAMD1A-209ENST00000598580 PTCD1O75127 700 aaKnown RBP15.12■□□□□ 0.01
GRAMD1A-209ENST00000598580 RPS6KA4O75676 772 aa15.12■□□□□ 0.01
GRAMD1A-209ENST00000598580 MTHFSP49914 203 aa15.12■□□□□ 0.01
GRAMD1A-209ENST00000598580 AMOTQ4VCS5 1084 aa15.12■□□□□ 0.01
GRAMD1A-209ENST00000598580 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
GRAMD1A-209ENST00000598580 A0A0G2JLW4 131 aa15.11■□□□□ 0.01
GRAMD1A-209ENST00000598580 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
GRAMD1A-209ENST00000598580 HSP90AB1P08238 724 aaKnown RBP15.11■□□□□ 0.01
GRAMD1A-209ENST00000598580 LGR6Q9HBX8 967 aa15.11■□□□□ 0.01
GRAMD1A-209ENST00000598580 RTCBQ9Y3I0 505 aaKnown RBP15.11■□□□□ 0.01
GRAMD1A-209ENST00000598580 CNTNAP4Q9C0A0 1308 aa15.11■□□□□ 0.01
GRAMD1A-209ENST00000598580 PXDNLA1KZ92 1463 aa15.1■□□□□ 0.01
GRAMD1A-209ENST00000598580 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
GRAMD1A-209ENST00000598580 KIF7Q2M1P5 1343 aa15.1■□□□□ 0.01
GRAMD1A-209ENST00000598580 MYH14Q7Z406 1995 aaKnown RBP15.09■□□□□ 0.01
GRAMD1A-209ENST00000598580 INTS5Q6P9B9 1019 aaKnown RBP15.09■□□□□ 0.01
GRAMD1A-209ENST00000598580 NLGN1Q8N2Q7 840 aa15.09■□□□□ 0.01
GRAMD1A-209ENST00000598580 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
GRAMD1A-209ENST00000598580 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
GRAMD1A-209ENST00000598580 DPEP1P16444 411 aa15.08■□□□□ 0
GRAMD1A-209ENST00000598580 KCNA3P22001 575 aa15.08■□□□□ 0
GRAMD1A-209ENST00000598580 CRKLP46109 303 aaKnown RBP15.08■□□□□ 0
GRAMD1A-209ENST00000598580 KIAA1551Q9HCM1 1747 aa15.07■□□□□ 0
GRAMD1A-209ENST00000598580 ADRA2BP18089 450 aa15.07■□□□□ 0
GRAMD1A-209ENST00000598580 DDR1Q08345 913 aa15.07■□□□□ 0
GRAMD1A-209ENST00000598580 FKBP8Q14318 412 aa15.07■□□□□ 0
GRAMD1A-209ENST00000598580 C1orf141Q5JVX7 400 aa15.07■□□□□ 0
GRAMD1A-209ENST00000598580 C10orf71Q711Q0 1435 aa15.07■□□□□ 0
GRAMD1A-209ENST00000598580 CICQ96RK0 1608 aaPredicted RBP15.06■□□□□ 0
GRAMD1A-209ENST00000598580 HMOX1P09601 288 aa15.06■□□□□ 0
GRAMD1A-209ENST00000598580 RFC4P35249 363 aa15.06■□□□□ 0
GRAMD1A-209ENST00000598580 TGFB2P61812 414 aa15.06■□□□□ 0
GRAMD1A-209ENST00000598580 DNAJC10Q8IXB1 793 aa15.06■□□□□ 0
GRAMD1A-209ENST00000598580 GPBP1L1Q9HC44 474 aaPredicted RBP15.06■□□□□ 0
GRAMD1A-209ENST00000598580 ZNF831Q5JPB2 1677 aa15.06■□□□□ 0
GRAMD1A-209ENST00000598580 COL5A3P25940 1745 aaPredicted RBP15.06■□□□□ 0
GRAMD1A-209ENST00000598580 KIF3CO14782 793 aa15.05■□□□□ -0
GRAMD1A-209ENST00000598580 SLC39A6Q13433 755 aa15.05■□□□□ -0
GRAMD1A-209ENST00000598580 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
GRAMD1A-209ENST00000598580 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
GRAMD1A-209ENST00000598580 AKAP4Q5JQC9 854 aa15.04■□□□□ -0
GRAMD1A-209ENST00000598580 SLC52A2Q9HAB3 445 aa15.04■□□□□ -0
GRAMD1A-209ENST00000598580 BCS1LQ9Y276 419 aa15.04■□□□□ -0
GRAMD1A-209ENST00000598580 USP42Q9H9J4 1324 aaKnown RBP15.03■□□□□ -0
GRAMD1A-209ENST00000598580 TM4SF1P30408 202 aa15.03■□□□□ -0
GRAMD1A-209ENST00000598580 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
GRAMD1A-209ENST00000598580 KIF13BQ9NQT8 1826 aa15.02■□□□□ -0
GRAMD1A-209ENST00000598580 CYP19A1P11511 503 aaPredicted RBP15.02■□□□□ -0
GRAMD1A-209ENST00000598580 PARP3Q9Y6F1 533 aa15.02■□□□□ -0
GRAMD1A-209ENST00000598580 N4BP2Q86UW6 1770 aaPredicted RBP15.02□□□□□ -0.01
GRAMD1A-209ENST00000598580 C4AP0C0L4 1744 aa15.01□□□□□ -0.01
GRAMD1A-209ENST00000598580 TJP1Q07157 1748 aa15.01□□□□□ -0.01
GRAMD1A-209ENST00000598580 ADAMTS7Q9UKP4 1686 aa15.01□□□□□ -0.01
GRAMD1A-209ENST00000598580 ARHGAP27Q6ZUM4 889 aa15.01□□□□□ -0.01
GRAMD1A-209ENST00000598580 BCL2L12Q9HB09 334 aa15.01□□□□□ -0.01
GRAMD1A-209ENST00000598580 CCDC87Q9NVE4 849 aa15.01□□□□□ -0.01
GRAMD1A-209ENST00000598580 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
GRAMD1A-209ENST00000598580 POLRMTO00411 1230 aaKnown RBP15□□□□□ -0.01
GRAMD1A-209ENST00000598580 CHRNA5P30532 468 aa15□□□□□ -0.01
GRAMD1A-209ENST00000598580 USPL1Q5W0Q7 1092 aa15□□□□□ -0.01
GRAMD1A-209ENST00000598580 FCHSD2O94868 740 aa14.99□□□□□ -0.01
GRAMD1A-209ENST00000598580 KCPQ6ZWJ8 1503 aa14.98□□□□□ -0.01
GRAMD1A-209ENST00000598580 MRC1P22897 1456 aa14.98□□□□□ -0.01
GRAMD1A-209ENST00000598580 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
GRAMD1A-209ENST00000598580 HSPA6P17066 643 aa14.98□□□□□ -0.01
GRAMD1A-209ENST00000598580 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
GRAMD1A-209ENST00000598580 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
GRAMD1A-209ENST00000598580 ZBTB1Q9Y2K1 713 aa14.98□□□□□ -0.01
GRAMD1A-209ENST00000598580 SCN11AQ9UI33 1791 aa14.98□□□□□ -0.01
GRAMD1A-209ENST00000598580 COL3A1P02461 1466 aaPredicted RBP14.97□□□□□ -0.01
GRAMD1A-209ENST00000598580 NFIXQ14938 502 aa14.97□□□□□ -0.01
GRAMD1A-209ENST00000598580 NMRK2Q9NPI5 230 aa14.97□□□□□ -0.01
GRAMD1A-209ENST00000598580 C9orf131Q5VYM1 1079 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms