RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 ATG3Q9NT62 314 aa24.05■■□□□ 1.44
IRF3-216ENST00000597180 CCNL1Q9UK58 526 aaPredicted RBP24.05■■□□□ 1.44
IRF3-216ENST00000597180 R3HDM1Q15032 1099 aaKnown RBP24.04■■□□□ 1.44
IRF3-216ENST00000597180 TUBGCP6Q96RT7 1819 aa24.04■■□□□ 1.44
IRF3-216ENST00000597180 CEMIPQ8WUJ3 1361 aa24.03■■□□□ 1.44
IRF3-216ENST00000597180 PSDA5PKW4 1024 aaPredicted RBP24.03■■□□□ 1.44
IRF3-216ENST00000597180 WDR43Q15061 677 aaKnown RBP eCLIP24.03■■□□□ 1.44
IRF3-216ENST00000597180 IL17REQ8NFR9 667 aa24.03■■□□□ 1.44
IRF3-216ENST00000597180 CASZ1Q86V15 1759 aa24.02■■□□□ 1.44
IRF3-216ENST00000597180 UBR2Q8IWV8 1755 aa24.02■■□□□ 1.44
IRF3-216ENST00000597180 CICQ96RK0 1608 aaPredicted RBP24.02■■□□□ 1.44
IRF3-216ENST00000597180 HTATSF1O43719 755 aaKnown RBP24.01■■□□□ 1.43
IRF3-216ENST00000597180 KCNQ4P56696 695 aa24.01■■□□□ 1.43
IRF3-216ENST00000597180 CCDC184Q52MB2 194 aa24.01■■□□□ 1.43
IRF3-216ENST00000597180 STK32BQ9NY57 414 aa24.01■■□□□ 1.43
IRF3-216ENST00000597180 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
IRF3-216ENST00000597180 LOC102724428A0A0B4J2F2 783 aa24■■□□□ 1.43
IRF3-216ENST00000597180 SIK1P57059 783 aa24■■□□□ 1.43
IRF3-216ENST00000597180 SLC15A2Q16348 729 aa24■■□□□ 1.43
IRF3-216ENST00000597180 ADAMTS8Q9UP79 889 aa24■■□□□ 1.43
IRF3-216ENST00000597180 C4BP0C0L5 1744 aa24■■□□□ 1.43
IRF3-216ENST00000597180 COL5A3P25940 1745 aaPredicted RBP24■■□□□ 1.43
IRF3-216ENST00000597180 HMGB2P26583 209 aaKnown RBP23.99■■□□□ 1.43
IRF3-216ENST00000597180 NFE2L2Q16236 605 aa23.99■■□□□ 1.43
IRF3-216ENST00000597180 ZNF827Q17R98 1081 aa23.98■■□□□ 1.43
IRF3-216ENST00000597180 AKT1S1Q96B36 256 aa23.98■■□□□ 1.43
IRF3-216ENST00000597180 TJP1Q07157 1748 aa23.97■■□□□ 1.43
IRF3-216ENST00000597180 RTF1Q92541 710 aaKnown RBP23.97■■□□□ 1.43
IRF3-216ENST00000597180 KCPQ6ZWJ8 1503 aa23.96■■□□□ 1.43
IRF3-216ENST00000597180 TEFQ10587 303 aa23.96■■□□□ 1.43
IRF3-216ENST00000597180 UBR3Q6ZT12 1888 aa23.96■■□□□ 1.43
IRF3-216ENST00000597180 RUNDC1Q96C34 613 aa23.95■■□□□ 1.42
IRF3-216ENST00000597180 ATP6V1AP38606 617 aa23.94■■□□□ 1.42
IRF3-216ENST00000597180 MCM10Q7L590 875 aa23.94■■□□□ 1.42
IRF3-216ENST00000597180 CCDC146Q8IYE0 955 aa23.94■■□□□ 1.42
IRF3-216ENST00000597180 SLC4A9Q96Q91 983 aa23.94■■□□□ 1.42
IRF3-216ENST00000597180 LRP5O75197 1615 aa23.93■■□□□ 1.42
IRF3-216ENST00000597180 ITPK1Q13572 414 aa23.93■■□□□ 1.42
IRF3-216ENST00000597180 RBM42Q9BTD8 480 aaKnown RBP23.93■■□□□ 1.42
IRF3-216ENST00000597180 MRS2Q9HD23 443 aa23.93■■□□□ 1.42
IRF3-216ENST00000597180 TMPOP42166 694 aaKnown RBP23.92■■□□□ 1.42
IRF3-216ENST00000597180 DCTN1Q14203 1278 aa23.92■■□□□ 1.42
IRF3-216ENST00000597180 LINC00116Q8NCU8 138 aa23.92■■□□□ 1.42
IRF3-216ENST00000597180 PNISRQ8TF01 805 aaKnown RBP23.92■■□□□ 1.42
IRF3-216ENST00000597180 MYH14Q7Z406 1995 aaKnown RBP23.91■■□□□ 1.42
IRF3-216ENST00000597180 SLC39A6Q13433 755 aa23.91■■□□□ 1.42
IRF3-216ENST00000597180 KDM3BQ7LBC6 1761 aa23.91■■□□□ 1.42
IRF3-216ENST00000597180 PTCD1O75127 700 aaKnown RBP23.9■■□□□ 1.42
IRF3-216ENST00000597180 RIPK4P57078 832 aa23.89■■□□□ 1.41
IRF3-216ENST00000597180 ZNF790Q6PG37 636 aa23.88■■□□□ 1.41
IRF3-216ENST00000597180 PDGFDQ9GZP0 370 aaPredicted RBP23.88■■□□□ 1.41
IRF3-216ENST00000597180 TFCP2L1Q9NZI6 479 aa23.88■■□□□ 1.41
IRF3-216ENST00000597180 PNPLA7Q6ZV29 1317 aa23.87■■□□□ 1.41
IRF3-216ENST00000597180 BTBD11A6QL63 1104 aa23.87■■□□□ 1.41
IRF3-216ENST00000597180 TTC5Q8N0Z6 440 aa23.87■■□□□ 1.41
IRF3-216ENST00000597180 COL24A1Q17RW2 1714 aa23.87■■□□□ 1.41
IRF3-216ENST00000597180 LMOD3Q0VAK6 560 aa23.86■■□□□ 1.41
IRF3-216ENST00000597180 VSIG10Q8N0Z9 540 aa23.86■■□□□ 1.41
IRF3-216ENST00000597180 TAF7Q15545 349 aaPredicted RBP23.85■■□□□ 1.41
IRF3-216ENST00000597180 AK7Q96M32 723 aa23.85■■□□□ 1.41
IRF3-216ENST00000597180 RRP7AQ9Y3A4 280 aaKnown RBP23.85■■□□□ 1.41
IRF3-216ENST00000597180 CNTNAP4Q9C0A0 1308 aa23.84■■□□□ 1.41
IRF3-216ENST00000597180 RC3H1Q5TC82 1133 aaKnown RBP23.84■■□□□ 1.41
IRF3-216ENST00000597180 THUMPD2Q9BTF0 503 aaKnown RBP23.84■■□□□ 1.41
IRF3-216ENST00000597180 HEG1Q9ULI3 1381 aa23.83■■□□□ 1.41
IRF3-216ENST00000597180 ZNF496Q96IT1 587 aaPredicted RBP23.83■■□□□ 1.41
IRF3-216ENST00000597180 KCNQ3O43525 872 aa23.82■■□□□ 1.4
IRF3-216ENST00000597180 TRIM35Q9UPQ4 493 aa23.82■■□□□ 1.4
IRF3-216ENST00000597180 APAF1O14727 1248 aa23.81■■□□□ 1.4
IRF3-216ENST00000597180 NEUROD2Q15784 382 aa23.81■■□□□ 1.4
IRF3-216ENST00000597180 AMIGO3Q86WK7 504 aa23.81■■□□□ 1.4
IRF3-216ENST00000597180 DNAJC10Q8IXB1 793 aa23.81■■□□□ 1.4
IRF3-216ENST00000597180 FLAD1Q8NFF5 587 aa23.81■■□□□ 1.4
IRF3-216ENST00000597180 FMNL2Q96PY5 1086 aa23.81■■□□□ 1.4
IRF3-216ENST00000597180 GNPATO15228 680 aa23.8■■□□□ 1.4
IRF3-216ENST00000597180 C4AP0C0L4 1744 aa23.8■■□□□ 1.4
IRF3-216ENST00000597180 SSFA2P28290 1259 aa23.8■■□□□ 1.4
IRF3-216ENST00000597180 COL23A1Q86Y22 540 aaPredicted RBP23.8■■□□□ 1.4
IRF3-216ENST00000597180 SLC16A10Q8TF71 515 aa23.8■■□□□ 1.4
IRF3-216ENST00000597180 LAMB4A4D0S4 1761 aa23.79■■□□□ 1.4
IRF3-216ENST00000597180 CRKLP46109 303 aaKnown RBP23.79■■□□□ 1.4
IRF3-216ENST00000597180 MTFR1LQ9H019 292 aa23.79■■□□□ 1.4
IRF3-216ENST00000597180 SPON1Q9HCB6 807 aa23.79■■□□□ 1.4
IRF3-216ENST00000597180 ZBTB7AO95365 584 aa23.78■■□□□ 1.4
IRF3-216ENST00000597180 CYP19A1P11511 503 aaPredicted RBP23.78■■□□□ 1.4
IRF3-216ENST00000597180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.77■■□□□ 1.4
IRF3-216ENST00000597180 RPS6KA4O75676 772 aa23.77■■□□□ 1.4
IRF3-216ENST00000597180 MIS18AQ9NYP9 233 aa23.77■■□□□ 1.4
IRF3-216ENST00000597180 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
IRF3-216ENST00000597180 INTS5Q6P9B9 1019 aaKnown RBP23.76■■□□□ 1.39
IRF3-216ENST00000597180 TEX13AQ9BXU3 409 aaPredicted RBP23.76■■□□□ 1.39
IRF3-216ENST00000597180 BABAM1Q9NWV8 329 aa23.76■■□□□ 1.39
IRF3-216ENST00000597180 RTCBQ9Y3I0 505 aaKnown RBP23.76■■□□□ 1.39
IRF3-216ENST00000597180 CCER2I3L3R5 266 aa23.75■■□□□ 1.39
IRF3-216ENST00000597180 CCDC87Q9NVE4 849 aa23.75■■□□□ 1.39
IRF3-216ENST00000597180 PHF14O94880 888 aa23.74■■□□□ 1.39
IRF3-216ENST00000597180 ADRA2BP18089 450 aa23.74■■□□□ 1.39
IRF3-216ENST00000597180 SMIM5Q71RC9 77 aa23.74■■□□□ 1.39
IRF3-216ENST00000597180 STARD3NLO95772 234 aa23.73■■□□□ 1.39
IRF3-216ENST00000597180 PTGER2P43116 358 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms