RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CHMP5Q9NZZ3 219 aa28.12■■■□□ 2.09
SRRM1-222ENST00000596378 BABAM1Q9NWV8 329 aa28.11■■■□□ 2.09
SRRM1-222ENST00000596378 CACNA1FO60840 1977 aa28.11■■■□□ 2.09
SRRM1-222ENST00000596378 NCOA3Q9Y6Q9 1424 aa28.11■■■□□ 2.09
SRRM1-222ENST00000596378 GCP02774 474 aa28.1■■■□□ 2.09
SRRM1-222ENST00000596378 PNMA6EA0A0J9YXQ4 647 aa28.09■■■□□ 2.09
SRRM1-222ENST00000596378 KCNQ3O43525 872 aa28.09■■■□□ 2.09
SRRM1-222ENST00000596378 EIF2S2P20042 333 aaKnown RBP28.09■■■□□ 2.09
SRRM1-222ENST00000596378 HSP90AB1P08238 724 aaKnown RBP28.08■■■□□ 2.09
SRRM1-222ENST00000596378 ZNF530Q6P9A1 599 aaPredicted RBP28.08■■■□□ 2.09
SRRM1-222ENST00000596378 MED1Q15648 1581 aaPredicted RBP28.07■■■□□ 2.08
SRRM1-222ENST00000596378 GNAI3P08754 354 aa28.07■■■□□ 2.08
SRRM1-222ENST00000596378 MPRIPQ6WCQ1 1025 aa28.07■■■□□ 2.08
SRRM1-222ENST00000596378 LRRFIP2Q9Y608 721 aaKnown RBP28.07■■■□□ 2.08
SRRM1-222ENST00000596378 PHRF1Q9P1Y6 1649 aaKnown RBP28.07■■■□□ 2.08
SRRM1-222ENST00000596378 SOS1Q07889 1333 aaPredicted RBP28.07■■■□□ 2.08
SRRM1-222ENST00000596378 ARHGEF25Q86VW2 580 aa28.07■■■□□ 2.08
SRRM1-222ENST00000596378 EIF4A1P60842 406 aaKnown RBP28.06■■■□□ 2.08
SRRM1-222ENST00000596378 TSHZ3Q63HK5 1081 aa28.06■■■□□ 2.08
SRRM1-222ENST00000596378 FOXD4L1Q9NU39 408 aa28.06■■■□□ 2.08
SRRM1-222ENST00000596378 DDIT3P35638 169 aa28.05■■■□□ 2.08
SRRM1-222ENST00000596378 PXDNQ92626 1479 aa28.05■■■□□ 2.08
SRRM1-222ENST00000596378 USP44Q9H0E7 712 aa28.04■■■□□ 2.08
SRRM1-222ENST00000596378 KDM3BQ7LBC6 1761 aa28.04■■■□□ 2.08
SRRM1-222ENST00000596378 N4BP2Q86UW6 1770 aaPredicted RBP28.04■■■□□ 2.08
SRRM1-222ENST00000596378 MCM4P33991 863 aa28.04■■■□□ 2.08
SRRM1-222ENST00000596378 PROSER2Q86WR7 435 aaPredicted RBP28.04■■■□□ 2.08
SRRM1-222ENST00000596378 LMO7Q8WWI1 1683 aa28.03■■■□□ 2.08
SRRM1-222ENST00000596378 PDE1AP54750 535 aa28.03■■■□□ 2.08
SRRM1-222ENST00000596378 SLIT3O75094 1523 aa28.03■■■□□ 2.08
SRRM1-222ENST00000596378 ATP8B2P98198 1209 aa28.03■■■□□ 2.08
SRRM1-222ENST00000596378 CHPF2Q9P2E5 772 aa28.03■■■□□ 2.08
SRRM1-222ENST00000596378 AXIN2Q9Y2T1 843 aa28.03■■■□□ 2.08
SRRM1-222ENST00000596378 AKAP4Q5JQC9 854 aa28.02■■■□□ 2.08
SRRM1-222ENST00000596378 ANKRD24Q8TF21 1146 aa28.02■■■□□ 2.08
SRRM1-222ENST00000596378 USP26Q9BXU7 913 aa28.02■■■□□ 2.08
SRRM1-222ENST00000596378 ANXA1P04083 346 aa28.02■■■□□ 2.08
SRRM1-222ENST00000596378 TEFQ10587 303 aa28.02■■■□□ 2.08
SRRM1-222ENST00000596378 IL27Q8NEV9 243 aa28.02■■■□□ 2.08
SRRM1-222ENST00000596378 PXDNLA1KZ92 1463 aa28.02■■■□□ 2.08
SRRM1-222ENST00000596378 PLEKHO1Q53GL0 409 aaPredicted RBP28.01■■■□□ 2.07
SRRM1-222ENST00000596378 BTBD11A6QL63 1104 aa28.01■■■□□ 2.07
SRRM1-222ENST00000596378 KRT28Q7Z3Y7 464 aa28.01■■■□□ 2.07
SRRM1-222ENST00000596378 TRPM3Q9HCF6 1732 aaPredicted RBP28■■■□□ 2.07
SRRM1-222ENST00000596378 K7ELQ4 463 aaPredicted RBP28■■■□□ 2.07
SRRM1-222ENST00000596378 LRRCC1Q9C099 1032 aa28■■■□□ 2.07
SRRM1-222ENST00000596378 BRPF3Q9ULD4 1205 aa28■■■□□ 2.07
SRRM1-222ENST00000596378 UBTFL1P0CB47 393 aaPredicted RBP27.99■■■□□ 2.07
SRRM1-222ENST00000596378 OSBPL3Q9H4L5 887 aa27.98■■■□□ 2.07
SRRM1-222ENST00000596378 HSP90AA1P07900 732 aaKnown RBP27.98■■■□□ 2.07
SRRM1-222ENST00000596378 CASC1Q6TDU7 716 aa27.98■■■□□ 2.07
SRRM1-222ENST00000596378 SALL3Q9BXA9 1300 aa27.97■■■□□ 2.07
SRRM1-222ENST00000596378 IBTKQ9P2D0 1353 aaPredicted RBP27.97■■■□□ 2.07
SRRM1-222ENST00000596378 RGPD5Q99666 1765 aa27.97■■■□□ 2.07
SRRM1-222ENST00000596378 C1orf167Q5SNV9 1468 aa27.96■■■□□ 2.07
SRRM1-222ENST00000596378 RNMTO43148 476 aaKnown RBP27.96■■■□□ 2.07
SRRM1-222ENST00000596378 C1orf141Q5JVX7 400 aa27.96■■■□□ 2.07
SRRM1-222ENST00000596378 SRCIN1Q9C0H9 1055 aa27.96■■■□□ 2.07
SRRM1-222ENST00000596378 ZC3H6P61129 1189 aaKnown RBP27.95■■■□□ 2.06
SRRM1-222ENST00000596378 AMOTQ4VCS5 1084 aa27.95■■■□□ 2.06
SRRM1-222ENST00000596378 NCAPD2Q15021 1401 aa27.94■■■□□ 2.06
SRRM1-222ENST00000596378 PI4KAP2A4QPH2 592 aa27.94■■■□□ 2.06
SRRM1-222ENST00000596378 MX1P20591 662 aa27.94■■■□□ 2.06
SRRM1-222ENST00000596378 PI4KAP1Q8N8J0 262 aa27.94■■■□□ 2.06
SRRM1-222ENST00000596378 DDX17Q92841 729 aaKnown RBP27.93■■■□□ 2.06
SRRM1-222ENST00000596378 NBPF7P0C2Y1 421 aaPredicted RBP27.93■■■□□ 2.06
SRRM1-222ENST00000596378 RABEP1Q15276 862 aa27.93■■■□□ 2.06
SRRM1-222ENST00000596378 TNPO1Q92973 898 aaKnown RBP27.93■■■□□ 2.06
SRRM1-222ENST00000596378 TUBGCP6Q96RT7 1819 aa27.93■■■□□ 2.06
SRRM1-222ENST00000596378 HOXB7P09629 217 aa27.92■■■□□ 2.06
SRRM1-222ENST00000596378 EIF5BO60841 1220 aaKnown RBP27.92■■■□□ 2.06
SRRM1-222ENST00000596378 IL1RAPL2Q9NP60 686 aa27.92■■■□□ 2.06
SRRM1-222ENST00000596378 PRAMEF22A3QJZ6 481 aa27.91■■■□□ 2.06
SRRM1-222ENST00000596378 PPP1R42Q7Z4L9 355 aa27.91■■■□□ 2.06
SRRM1-222ENST00000596378 DNAAF4Q8WXU2 420 aa27.91■■■□□ 2.06
SRRM1-222ENST00000596378 GZF1Q9H116 711 aaPredicted RBP27.91■■■□□ 2.06
SRRM1-222ENST00000596378 C19orf44Q9H6X5 657 aa27.91■■■□□ 2.06
SRRM1-222ENST00000596378 ERC2O15083 957 aa27.9■■■□□ 2.06
SRRM1-222ENST00000596378 BEND3Q5T5X7 828 aa27.9■■■□□ 2.06
SRRM1-222ENST00000596378 SSH3Q8TE77 659 aa27.9■■■□□ 2.06
SRRM1-222ENST00000596378 ADCY9O60503 1353 aa27.89■■■□□ 2.06
SRRM1-222ENST00000596378 PROSER3Q2NL68 480 aa27.89■■■□□ 2.06
SRRM1-222ENST00000596378 CIZ1Q9ULV3 898 aaPredicted RBP27.89■■■□□ 2.06
SRRM1-222ENST00000596378 KIF1AQ12756 1690 aa27.89■■■□□ 2.06
SRRM1-222ENST00000596378 CAMTA1Q9Y6Y1 1673 aa27.89■■■□□ 2.06
SRRM1-222ENST00000596378 REC8O95072 547 aa27.89■■■□□ 2.05
SRRM1-222ENST00000596378 RAB3GAP1Q15042 981 aa27.88■■■□□ 2.05
SRRM1-222ENST00000596378 TRAK2O60296 914 aa27.87■■■□□ 2.05
SRRM1-222ENST00000596378 ERBB3P21860 1342 aa27.87■■■□□ 2.05
SRRM1-222ENST00000596378 RILPL2Q969X0 211 aa27.87■■■□□ 2.05
SRRM1-222ENST00000596378 TRIM6-TRIM34B2RNG4 842 aa27.86■■■□□ 2.05
SRRM1-222ENST00000596378 SURF6O75683 361 aaKnown RBP27.86■■■□□ 2.05
SRRM1-222ENST00000596378 SRGAP3O43295 1099 aa27.86■■■□□ 2.05
SRRM1-222ENST00000596378 GIGYF1O75420 1035 aaPredicted RBP27.86■■■□□ 2.05
SRRM1-222ENST00000596378 NUTM1Q86Y26 1132 aa27.86■■■□□ 2.05
SRRM1-222ENST00000596378 UNC5CLQ8IV45 518 aa27.86■■■□□ 2.05
SRRM1-222ENST00000596378 ALS2Q96Q42 1657 aa27.86■■■□□ 2.05
SRRM1-222ENST00000596378 POLA2Q14181 598 aa27.85■■■□□ 2.05
SRRM1-222ENST00000596378 ARXQ96QS3 562 aa27.85■■■□□ 2.05
SRRM1-222ENST00000596378 DBF4Q9UBU7 674 aaPredicted RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms