RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-215ENST00000596351 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.24
LTBP4-215ENST00000596351 AMER1Q5JTC6 1135 aaPredicted RBP16.52■□□□□ 0.24
LTBP4-215ENST00000596351 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.24
LTBP4-215ENST00000596351 FLAD1Q8NFF5 587 aa16.52■□□□□ 0.24
LTBP4-215ENST00000596351 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
LTBP4-215ENST00000596351 KDRP35968 1356 aa16.51■□□□□ 0.23
LTBP4-215ENST00000596351 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
LTBP4-215ENST00000596351 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
LTBP4-215ENST00000596351 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
LTBP4-215ENST00000596351 GNPATO15228 680 aa16.5■□□□□ 0.23
LTBP4-215ENST00000596351 SULT6B1Q6IMI4 303 aa16.5■□□□□ 0.23
LTBP4-215ENST00000596351 C4AP0C0L4 1744 aa16.49■□□□□ 0.23
LTBP4-215ENST00000596351 YBX3P16989 372 aaKnown RBP eCLIP16.49■□□□□ 0.23
LTBP4-215ENST00000596351 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
LTBP4-215ENST00000596351 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
LTBP4-215ENST00000596351 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
LTBP4-215ENST00000596351 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
LTBP4-215ENST00000596351 SSFA2P28290 1259 aa16.48■□□□□ 0.23
LTBP4-215ENST00000596351 IL13P35225 146 aa16.48■□□□□ 0.23
LTBP4-215ENST00000596351 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
LTBP4-215ENST00000596351 TJP1Q07157 1748 aa16.48■□□□□ 0.23
LTBP4-215ENST00000596351 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
LTBP4-215ENST00000596351 AMOTQ4VCS5 1084 aa16.47■□□□□ 0.23
LTBP4-215ENST00000596351 CABP4P57796 275 aa16.46■□□□□ 0.23
LTBP4-215ENST00000596351 C1orf141Q5JVX7 400 aa16.46■□□□□ 0.23
LTBP4-215ENST00000596351 MTHFSP49914 203 aa16.45■□□□□ 0.22
LTBP4-215ENST00000596351 CC2D1BQ5T0F9 858 aaKnown RBP16.45■□□□□ 0.22
LTBP4-215ENST00000596351 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
LTBP4-215ENST00000596351 CD2APQ9Y5K6 639 aa16.45■□□□□ 0.22
LTBP4-215ENST00000596351 PER1O15534 1290 aaPredicted RBP16.44■□□□□ 0.22
LTBP4-215ENST00000596351 CNGB1Q14028 1251 aaPredicted RBP16.44■□□□□ 0.22
LTBP4-215ENST00000596351 KIF13BQ9NQT8 1826 aa16.44■□□□□ 0.22
LTBP4-215ENST00000596351 KIAA1551Q9HCM1 1747 aa16.44■□□□□ 0.22
LTBP4-215ENST00000596351 N4BP2Q86UW6 1770 aaPredicted RBP16.43■□□□□ 0.22
LTBP4-215ENST00000596351 HMOX1P09601 288 aa16.43■□□□□ 0.22
LTBP4-215ENST00000596351 CICQ96RK0 1608 aaPredicted RBP16.43■□□□□ 0.22
LTBP4-215ENST00000596351 PTCD1O75127 700 aaKnown RBP16.42■□□□□ 0.22
LTBP4-215ENST00000596351 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
LTBP4-215ENST00000596351 RTCBQ9Y3I0 505 aaKnown RBP16.42■□□□□ 0.22
LTBP4-215ENST00000596351 CNTNAP4Q9C0A0 1308 aa16.41■□□□□ 0.22
LTBP4-215ENST00000596351 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
LTBP4-215ENST00000596351 ADAMTS7Q9UKP4 1686 aa16.4■□□□□ 0.22
LTBP4-215ENST00000596351 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
LTBP4-215ENST00000596351 MMP10P09238 476 aa16.4■□□□□ 0.22
LTBP4-215ENST00000596351 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
LTBP4-215ENST00000596351 MRC1P22897 1456 aa16.4■□□□□ 0.22
LTBP4-215ENST00000596351 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
LTBP4-215ENST00000596351 LGR6Q9HBX8 967 aa16.39■□□□□ 0.21
LTBP4-215ENST00000596351 DIAPH1O60610 1272 aaKnown RBP16.38■□□□□ 0.21
LTBP4-215ENST00000596351 AKAP4Q5JQC9 854 aa16.38■□□□□ 0.21
LTBP4-215ENST00000596351 RC3H1Q5TC82 1133 aaKnown RBP16.38■□□□□ 0.21
LTBP4-215ENST00000596351 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
LTBP4-215ENST00000596351 UBR2Q8IWV8 1755 aa16.37■□□□□ 0.21
LTBP4-215ENST00000596351 RPS6KA4O75676 772 aa16.37■□□□□ 0.21
LTBP4-215ENST00000596351 CRKLP46109 303 aaKnown RBP16.37■□□□□ 0.21
LTBP4-215ENST00000596351 BRCA1P38398 1863 aaKnown RBP16.37■□□□□ 0.21
LTBP4-215ENST00000596351 KCPQ6ZWJ8 1503 aa16.36■□□□□ 0.21
LTBP4-215ENST00000596351 GYS1P13807 737 aa16.36■□□□□ 0.21
LTBP4-215ENST00000596351 ADRA2BP18089 450 aa16.36■□□□□ 0.21
LTBP4-215ENST00000596351 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
LTBP4-215ENST00000596351 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
LTBP4-215ENST00000596351 C10orf71Q711Q0 1435 aa16.36■□□□□ 0.21
LTBP4-215ENST00000596351 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
LTBP4-215ENST00000596351 RFC4P35249 363 aa16.35■□□□□ 0.21
LTBP4-215ENST00000596351 SLC39A6Q13433 755 aa16.35■□□□□ 0.21
LTBP4-215ENST00000596351 NPC1L1Q9UHC9 1359 aa16.35■□□□□ 0.21
LTBP4-215ENST00000596351 ATP10DQ9P241 1426 aa16.35■□□□□ 0.21
LTBP4-215ENST00000596351 SIPA1L3O60292 1781 aaPredicted RBP16.34■□□□□ 0.21
LTBP4-215ENST00000596351 DNAJC10Q8IXB1 793 aa16.34■□□□□ 0.21
LTBP4-215ENST00000596351 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
LTBP4-215ENST00000596351 SRP68Q9UHB9 627 aaKnown RBP16.34■□□□□ 0.21
LTBP4-215ENST00000596351 U2SURPO15042 1029 aaKnown RBP16.33■□□□□ 0.2
LTBP4-215ENST00000596351 C1QTNF8P60827 252 aa16.33■□□□□ 0.2
LTBP4-215ENST00000596351 ADCY9O60503 1353 aa16.32■□□□□ 0.2
LTBP4-215ENST00000596351 GIGYF1O75420 1035 aaPredicted RBP16.32■□□□□ 0.2
LTBP4-215ENST00000596351 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
LTBP4-215ENST00000596351 AFDNP55196 1824 aaKnown RBP16.31■□□□□ 0.2
LTBP4-215ENST00000596351 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
LTBP4-215ENST00000596351 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
LTBP4-215ENST00000596351 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
LTBP4-215ENST00000596351 FKBP8Q14318 412 aa16.3■□□□□ 0.2
LTBP4-215ENST00000596351 CCDC87Q9NVE4 849 aa16.3■□□□□ 0.2
LTBP4-215ENST00000596351 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
LTBP4-215ENST00000596351 ARFGEF1Q9Y6D6 1849 aa16.3■□□□□ 0.2
LTBP4-215ENST00000596351 DDR1Q08345 913 aa16.29■□□□□ 0.2
LTBP4-215ENST00000596351 ZNF526Q8TF50 670 aaPredicted RBP16.29■□□□□ 0.2
LTBP4-215ENST00000596351 CEP350Q5VT06 3117 aa16.29■□□□□ 0.2
LTBP4-215ENST00000596351 SOS1Q07889 1333 aaPredicted RBP16.28■□□□□ 0.2
LTBP4-215ENST00000596351 CYP19A1P11511 503 aaPredicted RBP16.28■□□□□ 0.2
LTBP4-215ENST00000596351 DPEP1P16444 411 aa16.28■□□□□ 0.2
LTBP4-215ENST00000596351 BCS1LQ9Y276 419 aa16.28■□□□□ 0.2
LTBP4-215ENST00000596351 TGFB2P61812 414 aa16.27■□□□□ 0.2
LTBP4-215ENST00000596351 ZBTB1Q9Y2K1 713 aa16.27■□□□□ 0.2
LTBP4-215ENST00000596351 COL15A1P39059 1388 aa16.26■□□□□ 0.19
LTBP4-215ENST00000596351 USPL1Q5W0Q7 1092 aa16.26■□□□□ 0.19
LTBP4-215ENST00000596351 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
LTBP4-215ENST00000596351 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
LTBP4-215ENST00000596351 GPBP1L1Q9HC44 474 aaPredicted RBP16.25■□□□□ 0.19
LTBP4-215ENST00000596351 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
LTBP4-215ENST00000596351 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms