RNA–Protein interactions for RNA: ENST00000595034.5

IRF3-209, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-209ENST00000595034 TAF1LQ8IZX4 1826 aa25.02■■□□□ 1.6
IRF3-209ENST00000595034 IL13P35225 146 aa25.02■■□□□ 1.6
IRF3-209ENST00000595034 AEBP1Q8IUX7 1158 aa25.02■■□□□ 1.6
IRF3-209ENST00000595034 LINC00116Q8NCU8 138 aa25.02■■□□□ 1.6
IRF3-209ENST00000595034 RBM42Q9BTD8 480 aaKnown RBP25.02■■□□□ 1.6
IRF3-209ENST00000595034 GNPATO15228 680 aa25.01■■□□□ 1.59
IRF3-209ENST00000595034 CC2D1BQ5T0F9 858 aaKnown RBP25.01■■□□□ 1.59
IRF3-209ENST00000595034 CD2APQ9Y5K6 639 aa25■■□□□ 1.59
IRF3-209ENST00000595034 KDRP35968 1356 aa25■■□□□ 1.59
IRF3-209ENST00000595034 ITPK1Q13572 414 aa24.98■■□□□ 1.59
IRF3-209ENST00000595034 RTCBQ9Y3I0 505 aaKnown RBP24.98■■□□□ 1.59
IRF3-209ENST00000595034 PER1O15534 1290 aaPredicted RBP24.97■■□□□ 1.59
IRF3-209ENST00000595034 GRIN3BO60391 1043 aa24.97■■□□□ 1.59
IRF3-209ENST00000595034 DIAPH1O60610 1272 aaKnown RBP24.97■■□□□ 1.59
IRF3-209ENST00000595034 NLGN2Q8NFZ4 835 aa24.97■■□□□ 1.59
IRF3-209ENST00000595034 AKAP4Q5JQC9 854 aa24.96■■□□□ 1.59
IRF3-209ENST00000595034 KDM6AO15550 1401 aaPredicted RBP24.95■■□□□ 1.59
IRF3-209ENST00000595034 NPC1L1Q9UHC9 1359 aa24.95■■□□□ 1.59
IRF3-209ENST00000595034 TRAPPC3LQ5T215 181 aa24.95■■□□□ 1.58
IRF3-209ENST00000595034 ADRA2BP18089 450 aa24.94■■□□□ 1.58
IRF3-209ENST00000595034 RC3H1Q5TC82 1133 aaKnown RBP24.94■■□□□ 1.58
IRF3-209ENST00000595034 NFATC2IPQ8NCF5 419 aa24.93■■□□□ 1.58
IRF3-209ENST00000595034 UBR3Q6ZT12 1888 aa24.92■■□□□ 1.58
IRF3-209ENST00000595034 CNTNAP4Q9C0A0 1308 aa24.91■■□□□ 1.58
IRF3-209ENST00000595034 HMOX1P09601 288 aa24.91■■□□□ 1.58
IRF3-209ENST00000595034 ZNF784Q8NCA9 323 aaPredicted RBP24.91■■□□□ 1.58
IRF3-209ENST00000595034 ZNF831Q5JPB2 1677 aa24.91■■□□□ 1.58
IRF3-209ENST00000595034 PTCD1O75127 700 aaKnown RBP24.9■■□□□ 1.58
IRF3-209ENST00000595034 CNGB1Q14028 1251 aaPredicted RBP24.9■■□□□ 1.58
IRF3-209ENST00000595034 AMIGO3Q86WK7 504 aa24.9■■□□□ 1.58
IRF3-209ENST00000595034 RFC4P35249 363 aa24.89■■□□□ 1.58
IRF3-209ENST00000595034 NLGN1Q8N2Q7 840 aa24.89■■□□□ 1.58
IRF3-209ENST00000595034 SMIM5Q71RC9 77 aa24.88■■□□□ 1.57
IRF3-209ENST00000595034 CFAP53Q96M91 514 aa24.88■■□□□ 1.57
IRF3-209ENST00000595034 CHD4Q14839 1912 aa24.87■■□□□ 1.57
IRF3-209ENST00000595034 RPS6KA4O75676 772 aa24.87■■□□□ 1.57
IRF3-209ENST00000595034 SLC52A2Q9HAB3 445 aa24.87■■□□□ 1.57
IRF3-209ENST00000595034 U2SURPO15042 1029 aaKnown RBP24.86■■□□□ 1.57
IRF3-209ENST00000595034 SLC4A9Q96Q91 983 aa24.86■■□□□ 1.57
IRF3-209ENST00000595034 MMP10P09238 476 aa24.84■■□□□ 1.57
IRF3-209ENST00000595034 YBX3P16989 372 aaKnown RBP eCLIP24.84■■□□□ 1.57
IRF3-209ENST00000595034 RNMTO43148 476 aaKnown RBP24.83■■□□□ 1.57
IRF3-209ENST00000595034 ARHGEF1Q92888 912 aaKnown RBP24.83■■□□□ 1.57
IRF3-209ENST00000595034 CRKLP46109 303 aaKnown RBP24.82■■□□□ 1.56
IRF3-209ENST00000595034 MTHFSDQ2M296 383 aaKnown RBP24.81■■□□□ 1.56
IRF3-209ENST00000595034 GAS2L2Q8NHY3 880 aa24.81■■□□□ 1.56
IRF3-209ENST00000595034 NUDCQ9Y266 331 aa24.81■■□□□ 1.56
IRF3-209ENST00000595034 LGR6Q9HBX8 967 aa24.8■■□□□ 1.56
IRF3-209ENST00000595034 CCDC87Q9NVE4 849 aa24.8■■□□□ 1.56
IRF3-209ENST00000595034 PARP3Q9Y6F1 533 aa24.8■■□□□ 1.56
IRF3-209ENST00000595034 SCN11AQ9UI33 1791 aa24.8■■□□□ 1.56
IRF3-209ENST00000595034 COL5A3P25940 1745 aaPredicted RBP24.79■■□□□ 1.56
IRF3-209ENST00000595034 TTC5Q8N0Z6 440 aa24.78■■□□□ 1.56
IRF3-209ENST00000595034 MRC1P22897 1456 aa24.77■■□□□ 1.56
IRF3-209ENST00000595034 GYS1P13807 737 aa24.77■■□□□ 1.56
IRF3-209ENST00000595034 TGFB2P61812 414 aa24.77■■□□□ 1.56
IRF3-209ENST00000595034 TEFQ10587 303 aa24.77■■□□□ 1.56
IRF3-209ENST00000595034 GNAT3A8MTJ3 354 aa24.76■■□□□ 1.55
IRF3-209ENST00000595034 ZPR1O75312 459 aa24.75■■□□□ 1.55
IRF3-209ENST00000595034 COL3A1P02461 1466 aaPredicted RBP24.75■■□□□ 1.55
IRF3-209ENST00000595034 SLC39A6Q13433 755 aa24.74■■□□□ 1.55
IRF3-209ENST00000595034 DNAJC10Q8IXB1 793 aa24.74■■□□□ 1.55
IRF3-209ENST00000595034 VSIG10Q8N0Z9 540 aa24.74■■□□□ 1.55
IRF3-209ENST00000595034 CICQ96RK0 1608 aaPredicted RBP24.73■■□□□ 1.55
IRF3-209ENST00000595034 USP42Q9H9J4 1324 aaKnown RBP24.73■■□□□ 1.55
IRF3-209ENST00000595034 GIGYF1O75420 1035 aaPredicted RBP24.73■■□□□ 1.55
IRF3-209ENST00000595034 STARD3NLO95772 234 aa24.71■■□□□ 1.55
IRF3-209ENST00000595034 INTS5Q6P9B9 1019 aaKnown RBP24.71■■□□□ 1.55
IRF3-209ENST00000595034 WWC3Q9ULE0 1092 aa24.71■■□□□ 1.55
IRF3-209ENST00000595034 TJP1Q07157 1748 aa24.7■■□□□ 1.54
IRF3-209ENST00000595034 C10orf71Q711Q0 1435 aa24.69■■□□□ 1.54
IRF3-209ENST00000595034 CYP19A1P11511 503 aaPredicted RBP24.69■■□□□ 1.54
IRF3-209ENST00000595034 TEX13AQ9BXU3 409 aaPredicted RBP24.69■■□□□ 1.54
IRF3-209ENST00000595034 U2AF1L5P0DN76 240 aaPredicted RBP24.68■■□□□ 1.54
IRF3-209ENST00000595034 PPP2R1AP30153 589 aa24.68■■□□□ 1.54
IRF3-209ENST00000595034 PRKAR2BP31323 418 aa24.68■■□□□ 1.54
IRF3-209ENST00000595034 U2AF1Q01081 240 aaKnown RBP eCLIP24.68■■□□□ 1.54
IRF3-209ENST00000595034 SRP68Q9UHB9 627 aaKnown RBP24.68■■□□□ 1.54
IRF3-209ENST00000595034 C4AP0C0L4 1744 aa24.68■■□□□ 1.54
IRF3-209ENST00000595034 SOS1Q07889 1333 aaPredicted RBP24.67■■□□□ 1.54
IRF3-209ENST00000595034 ADAMTS7Q9UKP4 1686 aa24.67■■□□□ 1.54
IRF3-209ENST00000595034 PXDNLA1KZ92 1463 aa24.67■■□□□ 1.54
IRF3-209ENST00000595034 NEFMP07197 916 aa24.67■■□□□ 1.54
IRF3-209ENST00000595034 C1QTNF8P60827 252 aa24.67■■□□□ 1.54
IRF3-209ENST00000595034 NPM2Q86SE8 214 aaKnown RBP24.67■■□□□ 1.54
IRF3-209ENST00000595034 BCS1LQ9Y276 419 aa24.67■■□□□ 1.54
IRF3-209ENST00000595034 UTRNP46939 3433 aa24.67■■□□□ 1.54
IRF3-209ENST00000595034 FKBP8Q14318 412 aa24.66■■□□□ 1.54
IRF3-209ENST00000595034 RTF1Q92541 710 aaKnown RBP24.66■■□□□ 1.54
IRF3-209ENST00000595034 COL15A1P39059 1388 aa24.66■■□□□ 1.54
IRF3-209ENST00000595034 KCPQ6ZWJ8 1503 aa24.66■■□□□ 1.54
IRF3-209ENST00000595034 A0A087WZG4 1122 aa24.65■■□□□ 1.54
IRF3-209ENST00000595034 A0A0G2JLW4 131 aa24.65■■□□□ 1.54
IRF3-209ENST00000595034 ZNF790Q6PG37 636 aa24.65■■□□□ 1.54
IRF3-209ENST00000595034 RSPH6AQ9H0K4 717 aa24.65■■□□□ 1.54
IRF3-209ENST00000595034 MYH14Q7Z406 1995 aaKnown RBP24.65■■□□□ 1.54
IRF3-209ENST00000595034 FCHSD2O94868 740 aa24.64■■□□□ 1.54
IRF3-209ENST00000595034 USPL1Q5W0Q7 1092 aa24.64■■□□□ 1.54
IRF3-209ENST00000595034 IL17REQ8NFR9 667 aa24.64■■□□□ 1.54
IRF3-209ENST00000595034 GPBP1L1Q9HC44 474 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms