RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 DDX54Q8TDD1 881 aaKnown RBP4.77□□□□□ -1.65
VRK3-204ENST00000593912 GPR101Q96P66 508 aaPredicted RBP4.77□□□□□ -1.65
VRK3-204ENST00000593912 COL25A1Q9BXS0 654 aaPredicted RBP4.77□□□□□ -1.65
VRK3-204ENST00000593912 RAPGEFL1Q9UHV5 662 aa4.77□□□□□ -1.65
VRK3-204ENST00000593912 COLQQ9Y215 455 aaPredicted RBP4.77□□□□□ -1.65
VRK3-204ENST00000593912 C4AP0C0L4 1744 aa4.77□□□□□ -1.65
VRK3-204ENST00000593912 ANKRD36BQ8N2N9 1353 aa4.77□□□□□ -1.65
VRK3-204ENST00000593912 BRCA2P51587 3418 aa4.76□□□□□ -1.65
VRK3-204ENST00000593912 ZC3H4Q9UPT8 1303 aaKnown RBP4.76□□□□□ -1.65
VRK3-204ENST00000593912 SOX12O15370 315 aa4.76□□□□□ -1.65
VRK3-204ENST00000593912 LMNB1P20700 586 aa4.76□□□□□ -1.65
VRK3-204ENST00000593912 CHRNA5P30532 468 aa4.76□□□□□ -1.65
VRK3-204ENST00000593912 FMR1Q06787 632 aaKnown RBP eCLIP4.76□□□□□ -1.65
VRK3-204ENST00000593912 FAM50AQ14320 339 aaKnown RBP4.76□□□□□ -1.65
VRK3-204ENST00000593912 NUDT16Q96DE0 195 aaKnown RBP4.76□□□□□ -1.65
VRK3-204ENST00000593912 AK7Q96M32 723 aa4.76□□□□□ -1.65
VRK3-204ENST00000593912 PIM2Q9P1W9 311 aa4.76□□□□□ -1.65
VRK3-204ENST00000593912 POLR3AO14802 1390 aaPredicted RBP4.76□□□□□ -1.65
VRK3-204ENST00000593912 EIF3AQ14152 1382 aaKnown RBP4.76□□□□□ -1.65
VRK3-204ENST00000593912 RANBP2P49792 3224 aaKnown RBP4.76□□□□□ -1.65
VRK3-204ENST00000593912 DDNO94850 711 aaPredicted RBP4.75□□□□□ -1.65
VRK3-204ENST00000593912 IL2RBP14784 551 aa4.75□□□□□ -1.65
VRK3-204ENST00000593912 RGL3Q3MIN7 710 aa4.75□□□□□ -1.65
VRK3-204ENST00000593912 CFAP70Q5T0N1 1121 aa4.75□□□□□ -1.65
VRK3-204ENST00000593912 LDHDQ86WU2 507 aa4.75□□□□□ -1.65
VRK3-204ENST00000593912 DICER1Q9UPY3 1922 aaKnown RBP4.75□□□□□ -1.65
VRK3-204ENST00000593912 ADAMTSL1Q8N6G6 1762 aa4.75□□□□□ -1.65
VRK3-204ENST00000593912 USP47Q96K76 1375 aa4.75□□□□□ -1.65
VRK3-204ENST00000593912 LAMB4A4D0S4 1761 aa4.74□□□□□ -1.65
VRK3-204ENST00000593912 EAPPQ56P03 285 aaPredicted RBP4.74□□□□□ -1.65
VRK3-204ENST00000593912 MAP1SQ66K74 1059 aaPredicted RBP4.74□□□□□ -1.65
VRK3-204ENST00000593912 CCDC87Q9NVE4 849 aa4.74□□□□□ -1.65
VRK3-204ENST00000593912 NLRP2Q9NX02 1062 aa4.74□□□□□ -1.65
VRK3-204ENST00000593912 HPS5Q9UPZ3 1129 aa4.74□□□□□ -1.65
VRK3-204ENST00000593912 CLEC11AQ9Y240 323 aa4.74□□□□□ -1.65
VRK3-204ENST00000593912 CENPFP49454 3210 aa4.74□□□□□ -1.65
VRK3-204ENST00000593912 SCN11AQ9UI33 1791 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 NFKBIEO00221 500 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 COL9A1P20849 921 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 ECE1P42892 770 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 NLRP6P59044 892 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 CIAPIN1Q6FI81 312 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 DPY19L2Q6NUT2 758 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 ARHGEF25Q86VW2 580 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 TAF1DQ9H5J8 278 aaPredicted RBP4.73□□□□□ -1.65
VRK3-204ENST00000593912 TRAK1Q9UPV9 953 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 CACNA1AO00555 2505 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 TRPM7Q96QT4 1865 aa4.73□□□□□ -1.65
VRK3-204ENST00000593912 HTTP42858 3142 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 SCN4AP35499 1836 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 CA12O43570 354 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 SSFA2P28290 1259 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 CNTROBQ8N137 903 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 LINC00116Q8NCU8 138 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 ZIC5Q96T25 663 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 C14orf93Q9H972 538 aaKnown RBP4.72□□□□□ -1.65
VRK3-204ENST00000593912 PRDM6Q9NQX0 595 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 PALLDQ8WX93 1383 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 CEP290O15078 2479 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 NSD3Q9BZ95 1437 aa4.72□□□□□ -1.65
VRK3-204ENST00000593912 GNPATO15228 680 aa4.71□□□□□ -1.66
VRK3-204ENST00000593912 MAP2K2P36507 400 aa4.71□□□□□ -1.66
VRK3-204ENST00000593912 NBPF1Q3BBV0 1214 aa4.71□□□□□ -1.66
VRK3-204ENST00000593912 ERFEQ4G0M1 354 aa4.71□□□□□ -1.66
VRK3-204ENST00000593912 DDX21Q9NR30 783 aaKnown RBP eCLIP4.71□□□□□ -1.66
VRK3-204ENST00000593912 MAP2P11137 1827 aaKnown RBP4.71□□□□□ -1.66
VRK3-204ENST00000593912 NFAT5O94916 1531 aa4.71□□□□□ -1.66
VRK3-204ENST00000593912 EYSQ5T1H1 3165 aa4.71□□□□□ -1.66
VRK3-204ENST00000593912 PAPPA2Q9BXP8 1791 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 DLEC1Q9Y238 1755 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 ADGRB1O14514 1584 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 ITGB4P16144 1822 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 LAMA3Q16787 3333 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 BRPF1P55201 1214 aaPredicted RBP4.7□□□□□ -1.66
VRK3-204ENST00000593912 TMF1P82094 1093 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 CTU1Q7Z7A3 348 aaKnown RBP4.7□□□□□ -1.66
VRK3-204ENST00000593912 PARP3Q9Y6F1 533 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 FER1L6Q2WGJ9 1857 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 LTN1O94822 1766 aa4.7□□□□□ -1.66
VRK3-204ENST00000593912 RGPD2P0DJD1 1756 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 PLEKHG3A1L390 1219 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 POTEFA5A3E0 1075 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 IQCA1LA6NCM1 817 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 TRAF5O00463 557 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 GYS1P13807 737 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 PLA2G5P39877 138 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 CST9Q5W186 159 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 CCDC24Q8N4L8 307 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 OTUD5Q96G74 571 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 CDK19Q9BWU1 502 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 TLL2Q9Y6L7 1015 aa4.69□□□□□ -1.66
VRK3-204ENST00000593912 ROCK1Q13464 1354 aa4.68□□□□□ -1.66
VRK3-204ENST00000593912 HOXD11P31277 338 aaPredicted RBP4.68□□□□□ -1.66
VRK3-204ENST00000593912 EPHX2P34913 555 aa4.68□□□□□ -1.66
VRK3-204ENST00000593912 DDR1Q08345 913 aa4.68□□□□□ -1.66
VRK3-204ENST00000593912 ITPK1Q13572 414 aa4.68□□□□□ -1.66
VRK3-204ENST00000593912 CHRDL2Q6WN34 429 aa4.68□□□□□ -1.66
VRK3-204ENST00000593912 NLGN1Q8N2Q7 840 aa4.68□□□□□ -1.66
VRK3-204ENST00000593912 ANKRD24Q8TF21 1146 aa4.68□□□□□ -1.66
VRK3-204ENST00000593912 SNX27Q96L92 541 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms