RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
PRKCSH-218ENST00000593053 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
PRKCSH-218ENST00000593053 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-218ENST00000593053 PHF14O94880 888 aa17.72■□□□□ 0.43
PRKCSH-218ENST00000593053 HMOX1P09601 288 aa17.72■□□□□ 0.43
PRKCSH-218ENST00000593053 YY1P25490 414 aa17.72■□□□□ 0.43
PRKCSH-218ENST00000593053 SMIM5Q71RC9 77 aa17.72■□□□□ 0.43
PRKCSH-218ENST00000593053 AMIGO3Q86WK7 504 aa17.72■□□□□ 0.43
PRKCSH-218ENST00000593053 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-218ENST00000593053 C4BP0C0L5 1744 aa17.71■□□□□ 0.43
PRKCSH-218ENST00000593053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-218ENST00000593053 GNPATO15228 680 aa17.69■□□□□ 0.42
PRKCSH-218ENST00000593053 SSFA2P28290 1259 aa17.68■□□□□ 0.42
PRKCSH-218ENST00000593053 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
PRKCSH-218ENST00000593053 NFATC2IPQ8NCF5 419 aa17.68■□□□□ 0.42
PRKCSH-218ENST00000593053 SLC4A9Q96Q91 983 aa17.68■□□□□ 0.42
PRKCSH-218ENST00000593053 TAF1LQ8IZX4 1826 aa17.68■□□□□ 0.42
PRKCSH-218ENST00000593053 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
PRKCSH-218ENST00000593053 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-218ENST00000593053 NLGN2Q8NFZ4 835 aa17.66■□□□□ 0.42
PRKCSH-218ENST00000593053 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-218ENST00000593053 MTHFSDQ2M296 383 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-218ENST00000593053 COL3A1P02461 1466 aaPredicted RBP17.64■□□□□ 0.41
PRKCSH-218ENST00000593053 GPR162Q16538 588 aa17.64■□□□□ 0.41
PRKCSH-218ENST00000593053 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-218ENST00000593053 LGR6Q9HBX8 967 aa17.64■□□□□ 0.41
PRKCSH-218ENST00000593053 UTRNP46939 3433 aa17.63■□□□□ 0.41
PRKCSH-218ENST00000593053 RTCBQ9Y3I0 505 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-218ENST00000593053 RNMTO43148 476 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-218ENST00000593053 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
PRKCSH-218ENST00000593053 UBR3Q6ZT12 1888 aa17.61■□□□□ 0.41
PRKCSH-218ENST00000593053 RC3H1Q5TC82 1133 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-218ENST00000593053 CFAP53Q96M91 514 aa17.61■□□□□ 0.41
PRKCSH-218ENST00000593053 CNTNAP4Q9C0A0 1308 aa17.61■□□□□ 0.41
PRKCSH-218ENST00000593053 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
PRKCSH-218ENST00000593053 CD2APQ9Y5K6 639 aa17.6■□□□□ 0.41
PRKCSH-218ENST00000593053 RPS6KA4O75676 772 aa17.59■□□□□ 0.41
PRKCSH-218ENST00000593053 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
PRKCSH-218ENST00000593053 ARHGEF1Q92888 912 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-218ENST00000593053 ADRA2BP18089 450 aa17.58■□□□□ 0.4
PRKCSH-218ENST00000593053 CRKLP46109 303 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-218ENST00000593053 MRC1P22897 1456 aa17.57■□□□□ 0.4
PRKCSH-218ENST00000593053 RFC4P35249 363 aa17.57■□□□□ 0.4
PRKCSH-218ENST00000593053 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
PRKCSH-218ENST00000593053 GAS2L2Q8NHY3 880 aa17.57■□□□□ 0.4
PRKCSH-218ENST00000593053 ZNF831Q5JPB2 1677 aa17.57■□□□□ 0.4
PRKCSH-218ENST00000593053 GOLGB1Q14789 3259 aaKnown RBP17.56■□□□□ 0.4
PRKCSH-218ENST00000593053 MMP10P09238 476 aa17.56■□□□□ 0.4
PRKCSH-218ENST00000593053 YBX3P16989 372 aaKnown RBP eCLIP17.56■□□□□ 0.44e-10■■□□□ 13.8
PRKCSH-218ENST00000593053 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
PRKCSH-218ENST00000593053 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
PRKCSH-218ENST00000593053 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
PRKCSH-218ENST00000593053 PRKAR2BP31323 418 aa17.55■□□□□ 0.4
PRKCSH-218ENST00000593053 DNAJC10Q8IXB1 793 aa17.55■□□□□ 0.4
PRKCSH-218ENST00000593053 NLGN1Q8N2Q7 840 aa17.55■□□□□ 0.4
PRKCSH-218ENST00000593053 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
PRKCSH-218ENST00000593053 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
PRKCSH-218ENST00000593053 INTS5Q6P9B9 1019 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-218ENST00000593053 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
PRKCSH-218ENST00000593053 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
PRKCSH-218ENST00000593053 COL5A3P25940 1745 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-218ENST00000593053 GYS1P13807 737 aa17.53■□□□□ 0.4
PRKCSH-218ENST00000593053 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
PRKCSH-218ENST00000593053 GRIN3BO60391 1043 aa17.52■□□□□ 0.4
PRKCSH-218ENST00000593053 TEFQ10587 303 aa17.52■□□□□ 0.4
PRKCSH-218ENST00000593053 ZNF784Q8NCA9 323 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-218ENST00000593053 CCDC87Q9NVE4 849 aa17.52■□□□□ 0.4
PRKCSH-218ENST00000593053 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-218ENST00000593053 CYP19A1P11511 503 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-218ENST00000593053 TJP1Q07157 1748 aa17.51■□□□□ 0.39
PRKCSH-218ENST00000593053 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
PRKCSH-218ENST00000593053 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
PRKCSH-218ENST00000593053 ADAMTS7Q9UKP4 1686 aa17.51■□□□□ 0.39
PRKCSH-218ENST00000593053 KCPQ6ZWJ8 1503 aa17.51■□□□□ 0.39
PRKCSH-218ENST00000593053 USP42Q9H9J4 1324 aaKnown RBP17.49■□□□□ 0.39
PRKCSH-218ENST00000593053 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
PRKCSH-218ENST00000593053 SOS1Q07889 1333 aaPredicted RBP17.48■□□□□ 0.39
PRKCSH-218ENST00000593053 CICQ96RK0 1608 aaPredicted RBP17.48■□□□□ 0.39
PRKCSH-218ENST00000593053 FCHSD2O94868 740 aa17.48■□□□□ 0.39
PRKCSH-218ENST00000593053 FKBP8Q14318 412 aa17.48■□□□□ 0.39
PRKCSH-218ENST00000593053 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
PRKCSH-218ENST00000593053 PARP3Q9Y6F1 533 aa17.48■□□□□ 0.39
PRKCSH-218ENST00000593053 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-218ENST00000593053 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
PRKCSH-218ENST00000593053 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-218ENST00000593053 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
PRKCSH-218ENST00000593053 ZPR1O75312 459 aa17.46■□□□□ 0.39
PRKCSH-218ENST00000593053 STARD3NLO95772 234 aa17.45■□□□□ 0.38
PRKCSH-218ENST00000593053 CANXP27824 592 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-218ENST00000593053 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
PRKCSH-218ENST00000593053 RTF1Q92541 710 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-218ENST00000593053 C10orf71Q711Q0 1435 aa17.45■□□□□ 0.38
PRKCSH-218ENST00000593053 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
PRKCSH-218ENST00000593053 COL15A1P39059 1388 aa17.44■□□□□ 0.38
PRKCSH-218ENST00000593053 HEG1Q9ULI3 1381 aa17.44■□□□□ 0.38
PRKCSH-218ENST00000593053 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
PRKCSH-218ENST00000593053 TGFB2P61812 414 aa17.44■□□□□ 0.38
PRKCSH-218ENST00000593053 DDR1Q08345 913 aa17.44■□□□□ 0.38
PRKCSH-218ENST00000593053 MCM10Q7L590 875 aa17.44■□□□□ 0.38
PRKCSH-218ENST00000593053 PXDNLA1KZ92 1463 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms