RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 TMF1P82094 1093 aa10.55□□□□□ -0.72
VAT1-209ENST00000592388 IP6K1Q92551 441 aa10.55□□□□□ -0.72
VAT1-209ENST00000592388 SMARCC1Q92922 1105 aaPredicted RBP10.55□□□□□ -0.72
VAT1-209ENST00000592388 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
VAT1-209ENST00000592388 BRCA1P38398 1863 aaKnown RBP10.55□□□□□ -0.72
VAT1-209ENST00000592388 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
VAT1-209ENST00000592388 ARFGEF1Q9Y6D6 1849 aa10.54□□□□□ -0.72
VAT1-209ENST00000592388 SBF1O95248 1867 aa10.54□□□□□ -0.72
VAT1-209ENST00000592388 CHRNA5P30532 468 aa10.54□□□□□ -0.72
VAT1-209ENST00000592388 NLGN1Q8N2Q7 840 aa10.54□□□□□ -0.72
VAT1-209ENST00000592388 EVC2Q86UK5 1308 aa10.54□□□□□ -0.72
VAT1-209ENST00000592388 ZC3H4Q9UPT8 1303 aaKnown RBP10.54□□□□□ -0.72
VAT1-209ENST00000592388 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
VAT1-209ENST00000592388 POTEIP0CG38 1075 aa10.53□□□□□ -0.72
VAT1-209ENST00000592388 POTEJP0CG39 1038 aa10.53□□□□□ -0.72
VAT1-209ENST00000592388 SIK1P57059 783 aa10.53□□□□□ -0.72
VAT1-209ENST00000592388 CHADLQ6NUI6 762 aa10.53□□□□□ -0.72
VAT1-209ENST00000592388 RGPD2P0DJD1 1756 aa10.52□□□□□ -0.72
VAT1-209ENST00000592388 LMNB1P20700 586 aa10.52□□□□□ -0.73
VAT1-209ENST00000592388 ITPK1Q13572 414 aa10.52□□□□□ -0.73
VAT1-209ENST00000592388 TRAPPC3LQ5T215 181 aa10.52□□□□□ -0.73
VAT1-209ENST00000592388 USHBP1Q8N6Y0 703 aa10.52□□□□□ -0.73
VAT1-209ENST00000592388 CD163L1Q9NR16 1453 aa10.51□□□□□ -0.73
VAT1-209ENST00000592388 ATP6V1AP38606 617 aa10.51□□□□□ -0.73
VAT1-209ENST00000592388 PIGBQ92521 554 aa10.51□□□□□ -0.73
VAT1-209ENST00000592388 GYS1P13807 737 aa10.5□□□□□ -0.73
VAT1-209ENST00000592388 DPY19L2Q6NUT2 758 aa10.5□□□□□ -0.73
VAT1-209ENST00000592388 RAPGEF4Q8WZA2 1011 aa10.5□□□□□ -0.73
VAT1-209ENST00000592388 ARHGEF1Q92888 912 aaKnown RBP10.5□□□□□ -0.73
VAT1-209ENST00000592388 RTCBQ9Y3I0 505 aaKnown RBP10.5□□□□□ -0.73
VAT1-209ENST00000592388 FAM208AQ9UK61 1670 aaKnown RBP10.5□□□□□ -0.73
VAT1-209ENST00000592388 C4AP0C0L4 1744 aa10.5□□□□□ -0.73
VAT1-209ENST00000592388 KDM6AO15550 1401 aaPredicted RBP10.5□□□□□ -0.73
VAT1-209ENST00000592388 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
VAT1-209ENST00000592388 NBPF6Q5VWK0 638 aa10.49□□□□□ -0.73
VAT1-209ENST00000592388 NBPF4Q96M43 638 aa10.49□□□□□ -0.73
VAT1-209ENST00000592388 PCDH11XQ9BZA7 1347 aa10.49□□□□□ -0.73
VAT1-209ENST00000592388 PCDH11YQ9BZA8 1340 aa10.49□□□□□ -0.73
VAT1-209ENST00000592388 SBNO2Q9Y2G9 1366 aa10.49□□□□□ -0.73
VAT1-209ENST00000592388 TATP17735 454 aaPredicted RBP10.48□□□□□ -0.73
VAT1-209ENST00000592388 FBLN1P23142 703 aa10.48□□□□□ -0.73
VAT1-209ENST00000592388 HOXC9P31274 260 aa10.48□□□□□ -0.73
VAT1-209ENST00000592388 RFC4P35249 363 aa10.48□□□□□ -0.73
VAT1-209ENST00000592388 AMPHP49418 695 aa10.48□□□□□ -0.73
VAT1-209ENST00000592388 MAP2K1Q02750 393 aaPredicted RBP10.48□□□□□ -0.73
VAT1-209ENST00000592388 KIF20BQ96Q89 1820 aa10.48□□□□□ -0.73
VAT1-209ENST00000592388 CGNL1Q0VF96 1302 aa10.48□□□□□ -0.73
VAT1-209ENST00000592388 PASKQ96RG2 1323 aa10.48□□□□□ -0.73
VAT1-209ENST00000592388 TONSLQ96HA7 1378 aa10.48□□□□□ -0.73
VAT1-209ENST00000592388 CYP27B1O15528 508 aa10.47□□□□□ -0.73
VAT1-209ENST00000592388 CARD11Q9BXL7 1154 aa10.47□□□□□ -0.73
VAT1-209ENST00000592388 MCOLN1Q9GZU1 580 aa10.47□□□□□ -0.73
VAT1-209ENST00000592388 ASAP1Q9ULH1 1129 aa10.47□□□□□ -0.73
VAT1-209ENST00000592388 VIRMAQ69YN4 1812 aaKnown RBP10.47□□□□□ -0.73
VAT1-209ENST00000592388 DEFB115Q30KQ5 88 aa10.46□□□□□ -0.73
VAT1-209ENST00000592388 TSKSQ9UJT2 592 aa10.46□□□□□ -0.73
VAT1-209ENST00000592388 MAP3K19Q56UN5 1328 aa10.46□□□□□ -0.73
VAT1-209ENST00000592388 WDR33Q9C0J8 1336 aaKnown RBP10.46□□□□□ -0.73
VAT1-209ENST00000592388 MAP2P11137 1827 aaKnown RBP10.46□□□□□ -0.74
VAT1-209ENST00000592388 A0A1W2PP64 1363 aa10.45□□□□□ -0.74
VAT1-209ENST00000592388 DDR1Q08345 913 aa10.45□□□□□ -0.74
VAT1-209ENST00000592388 BEGAINQ9BUH8 593 aa10.45□□□□□ -0.74
VAT1-209ENST00000592388 ITGB4P16144 1822 aa10.44□□□□□ -0.74
VAT1-209ENST00000592388 TNRC18O15417 2968 aaPredicted RBP10.44□□□□□ -0.74
VAT1-209ENST00000592388 RASSF10A6NK89 507 aa10.44□□□□□ -0.74
VAT1-209ENST00000592388 NFKBIEO00221 500 aa10.44□□□□□ -0.74
VAT1-209ENST00000592388 DDNO94850 711 aaPredicted RBP10.44□□□□□ -0.74
VAT1-209ENST00000592388 FKBP8Q14318 412 aa10.44□□□□□ -0.74
VAT1-209ENST00000592388 PRPF38BQ5VTL8 546 aaKnown RBP10.44□□□□□ -0.74
VAT1-209ENST00000592388 TMC1Q8TDI8 760 aa10.44□□□□□ -0.74
VAT1-209ENST00000592388 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
VAT1-209ENST00000592388 CCDC88AQ3V6T2 1871 aa10.43□□□□□ -0.74
VAT1-209ENST00000592388 ITGBL1O95965 494 aaPredicted RBP10.43□□□□□ -0.74
VAT1-209ENST00000592388 ADRA2BP18089 450 aa10.43□□□□□ -0.74
VAT1-209ENST00000592388 GRM1Q13255 1194 aa10.43□□□□□ -0.74
VAT1-209ENST00000592388 ERFEQ4G0M1 354 aa10.43□□□□□ -0.74
VAT1-209ENST00000592388 LDHDQ86WU2 507 aa10.43□□□□□ -0.74
VAT1-209ENST00000592388 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
VAT1-209ENST00000592388 SRP68Q9UHB9 627 aaKnown RBP10.43□□□□□ -0.74
VAT1-209ENST00000592388 EDC4Q6P2E9 1401 aaKnown RBP10.42□□□□□ -0.74
VAT1-209ENST00000592388 RPS6KA4O75676 772 aa10.42□□□□□ -0.74
VAT1-209ENST00000592388 EAPPQ56P03 285 aaPredicted RBP10.42□□□□□ -0.74
VAT1-209ENST00000592388 PAXIP1Q6ZW49 1069 aaPredicted RBP10.42□□□□□ -0.74
VAT1-209ENST00000592388 HDGFL2Q7Z4V5 671 aaPredicted RBP10.42□□□□□ -0.74
VAT1-209ENST00000592388 SLC12A5Q9H2X9 1139 aa10.42□□□□□ -0.74
VAT1-209ENST00000592388 ATG3Q9NT62 314 aa10.42□□□□□ -0.74
VAT1-209ENST00000592388 ABT1Q9ULW3 272 aaKnown RBP10.42□□□□□ -0.74
VAT1-209ENST00000592388 SOX10P56693 466 aa10.41□□□□□ -0.74
VAT1-209ENST00000592388 DGKZQ13574 1117 aa10.41□□□□□ -0.74
VAT1-209ENST00000592388 TTLL6Q8N841 843 aa10.41□□□□□ -0.74
VAT1-209ENST00000592388 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
VAT1-209ENST00000592388 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
VAT1-209ENST00000592388 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
VAT1-209ENST00000592388 POLRMTO00411 1230 aaKnown RBP10.4□□□□□ -0.74
VAT1-209ENST00000592388 RRS1Q15050 365 aaKnown RBP10.4□□□□□ -0.74
VAT1-209ENST00000592388 RC3H1Q5TC82 1133 aaKnown RBP10.4□□□□□ -0.74
VAT1-209ENST00000592388 COG3Q96JB2 828 aa10.4□□□□□ -0.74
VAT1-209ENST00000592388 TAF1DQ9H5J8 278 aaPredicted RBP10.4□□□□□ -0.74
VAT1-209ENST00000592388 ZNF219Q9P2Y4 722 aaPredicted RBP10.4□□□□□ -0.74
VAT1-209ENST00000592388 NKX1-1Q15270 411 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms