RNA–Protein interactions for RNA: ENST00000590212.1

SNRPD2-208, Transcript of small nuclear ribonucleoprotein D2 polypeptide, human

TSL 3 BASIC

Gene SNRPD2, Length 454 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPD2-208	ENST00000590212	NKX1-1	Q15270	411 aa	Predicted RBP	13.67	□□□□□ -0.22
SNRPD2-208	ENST00000590212	HSP90AB2P	Q58FF8	381 aa		13.67	□□□□□ -0.22
SNRPD2-208	ENST00000590212	C9orf131	Q5VYM1	1079 aa		13.67	□□□□□ -0.22
SNRPD2-208	ENST00000590212	NLGN1	Q8N2Q7	840 aa		13.67	□□□□□ -0.22
SNRPD2-208	ENST00000590212	FLT4	P35916	1363 aa		13.67	□□□□□ -0.22
SNRPD2-208	ENST00000590212	BRCA1	P38398	1863 aa	Known RBP	13.67	□□□□□ -0.22
SNRPD2-208	ENST00000590212	DPEP1	P16444	411 aa		13.66	□□□□□ -0.22
SNRPD2-208	ENST00000590212	ATP6V1A	P38606	617 aa		13.66	□□□□□ -0.22
SNRPD2-208	ENST00000590212	GGNBP2	Q9H3C7	697 aa		13.66	□□□□□ -0.22
SNRPD2-208	ENST00000590212	KDM2B	Q8NHM5	1336 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	ARFGEF1	Q9Y6D6	1849 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	FYB1	O15117	783 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	TMF1	P82094	1093 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	TRAPPC3L	Q5T215	181 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	CCDC87	Q9NVE4	849 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	TMOD3	Q9NYL9	352 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	ASAP1	Q9ULH1	1129 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	KIF24	Q5T7B8	1368 aa		13.65	□□□□□ -0.22
SNRPD2-208	ENST00000590212	KCP	Q6ZWJ8	1503 aa		13.64	□□□□□ -0.23
SNRPD2-208	ENST00000590212	C4A	P0C0L4	1744 aa		13.64	□□□□□ -0.23
SNRPD2-208	ENST00000590212	SPG7	Q9UQ90	795 aa		13.64	□□□□□ -0.23
SNRPD2-208	ENST00000590212	RTCB	Q9Y3I0	505 aa	Known RBP	13.64	□□□□□ -0.23
SNRPD2-208	ENST00000590212	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.63	□□□□□ -0.23
SNRPD2-208	ENST00000590212	TESK2	Q96S53	571 aa		13.63	□□□□□ -0.23
SNRPD2-208	ENST00000590212	SMC1B	Q8NDV3	1235 aa		13.62	□□□□□ -0.23
SNRPD2-208	ENST00000590212	RRAGC	Q9HB90	399 aa		13.62	□□□□□ -0.23
SNRPD2-208	ENST00000590212	RNF181	Q9P0P0	153 aa		13.62	□□□□□ -0.23
SNRPD2-208	ENST00000590212	PARP3	Q9Y6F1	533 aa		13.62	□□□□□ -0.23
SNRPD2-208	ENST00000590212	NCAPD2	Q15021	1401 aa		13.62	□□□□□ -0.23
SNRPD2-208	ENST00000590212	SLC24A1	O60721	1099 aa		13.61	□□□□□ -0.23
SNRPD2-208	ENST00000590212	GYS1	P13807	737 aa		13.61	□□□□□ -0.23
SNRPD2-208	ENST00000590212	ADRA2B	P18089	450 aa		13.61	□□□□□ -0.23
SNRPD2-208	ENST00000590212	KCNA3	P22001	575 aa		13.61	□□□□□ -0.23
SNRPD2-208	ENST00000590212	ARHGEF1	Q92888	912 aa	Known RBP	13.61	□□□□□ -0.23
SNRPD2-208	ENST00000590212	DCAF5	Q96JK2	942 aa		13.61	□□□□□ -0.23
SNRPD2-208	ENST00000590212	ATG3	Q9NT62	314 aa		13.61	□□□□□ -0.23
SNRPD2-208	ENST00000590212	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	5e-8	■□□□□ 9.2
SNRPD2-208	ENST00000590212	PIM2	Q9P1W9	311 aa		13.61	□□□□□ -0.23
SNRPD2-208	ENST00000590212	KDR	P35968	1356 aa		13.6	□□□□□ -0.23
SNRPD2-208	ENST00000590212	KIF20B	Q96Q89	1820 aa		13.6	□□□□□ -0.23
SNRPD2-208	ENST00000590212	ZNF831	Q5JPB2	1677 aa		13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	ST20-MTHFS	A0A0A6YYL1	179 aa		13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	HSPA1A	P0DMV8	641 aa	Known RBP	13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	HSPA1B	P0DMV9	641 aa	Known RBP	13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	RFC4	P35249	363 aa		13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	DALRD3	Q5D0E6	543 aa	Known RBP	13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	RC3H1	Q5TC82	1133 aa	Known RBP	13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	IFNL2	Q8IZJ0	200 aa		13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	SBF1	O95248	1867 aa		13.59	□□□□□ -0.23
SNRPD2-208	ENST00000590212	PHKG2	P15735	406 aa		13.58	□□□□□ -0.24
SNRPD2-208	ENST00000590212	EMILIN1	Q9Y6C2	1016 aa		13.58	□□□□□ -0.24
SNRPD2-208	ENST00000590212	COL5A3	P25940	1745 aa	Predicted RBP	13.58	□□□□□ -0.24
SNRPD2-208	ENST00000590212	CNTNAP4	Q9C0A0	1308 aa		13.58	□□□□□ -0.24
SNRPD2-208	ENST00000590212	TONSL	Q96HA7	1378 aa		13.58	□□□□□ -0.24
SNRPD2-208	ENST00000590212	PCNT	O95613	3336 aa		13.57	□□□□□ -0.24
SNRPD2-208	ENST00000590212	RPS6KA4	O75676	772 aa		13.57	□□□□□ -0.24
SNRPD2-208	ENST00000590212	SLC4A9	Q96Q91	983 aa		13.57	□□□□□ -0.24
SNRPD2-208	ENST00000590212	RBM42	Q9BTD8	480 aa	Known RBP	13.57	□□□□□ -0.24
SNRPD2-208	ENST00000590212	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.56	□□□□□ -0.24
SNRPD2-208	ENST00000590212	PPM1G	O15355	546 aa	Predicted RBP	13.55	□□□□□ -0.24
SNRPD2-208	ENST00000590212	EYA1	Q99502	592 aa		13.55	□□□□□ -0.24
SNRPD2-208	ENST00000590212	MYH14	Q7Z406	1995 aa	Known RBP	13.54	□□□□□ -0.24
SNRPD2-208	ENST00000590212	ANKRD26	Q9UPS8	1709 aa		13.54	□□□□□ -0.24
SNRPD2-208	ENST00000590212	VEGFA	P15692	232 aa	Predicted RBP	13.54	□□□□□ -0.24
SNRPD2-208	ENST00000590212	CHRNA5	P30532	468 aa		13.54	□□□□□ -0.24
SNRPD2-208	ENST00000590212	ERVV-2	B6SEH9	535 aa		13.53	□□□□□ -0.24
SNRPD2-208	ENST00000590212	DDR1	Q08345	913 aa		13.53	□□□□□ -0.24
SNRPD2-208	ENST00000590212	WASHC2A	Q641Q2	1341 aa		13.53	□□□□□ -0.24
SNRPD2-208	ENST00000590212	GLTPD2	A6NH11	291 aa		13.52	□□□□□ -0.25
SNRPD2-208	ENST00000590212	SRP68	Q9UHB9	627 aa	Known RBP	13.52	□□□□□ -0.25
SNRPD2-208	ENST00000590212	KDM6A	O15550	1401 aa	Predicted RBP	13.52	□□□□□ -0.25
SNRPD2-208	ENST00000590212	USP42	Q9H9J4	1324 aa	Known RBP	13.51	□□□□□ -0.25
SNRPD2-208	ENST00000590212	LMNB1	P20700	586 aa		13.51	□□□□□ -0.25
SNRPD2-208	ENST00000590212	RASSF7	Q02833	373 aa		13.51	□□□□□ -0.25
SNRPD2-208	ENST00000590212	FKBP8	Q14318	412 aa		13.51	□□□□□ -0.25
SNRPD2-208	ENST00000590212	HSP90AB1	P08238	724 aa	Known RBP	13.5	□□□□□ -0.25
SNRPD2-208	ENST00000590212	CRKL	P46109	303 aa	Known RBP	13.5	□□□□□ -0.25
SNRPD2-208	ENST00000590212	POLRMT	O00411	1230 aa	Known RBP	13.49	□□□□□ -0.25
SNRPD2-208	ENST00000590212	TIAM2	Q8IVF5	1701 aa		13.48	□□□□□ -0.25
SNRPD2-208	ENST00000590212	CABP4	P57796	275 aa		13.48	□□□□□ -0.25
SNRPD2-208	ENST00000590212	CDCA8	Q53HL2	280 aa		13.48	□□□□□ -0.25
SNRPD2-208	ENST00000590212	CARD14	Q9BXL6	1004 aa		13.48	□□□□□ -0.25
SNRPD2-208	ENST00000590212	PTCD1	O75127	700 aa	Known RBP	13.47	□□□□□ -0.25
SNRPD2-208	ENST00000590212	SLC34A2	O95436	690 aa		13.47	□□□□□ -0.25
SNRPD2-208	ENST00000590212	TM4SF1	P30408	202 aa		13.47	□□□□□ -0.25
SNRPD2-208	ENST00000590212	CCDC88A	Q3V6T2	1871 aa		13.46	□□□□□ -0.25
SNRPD2-208	ENST00000590212	EIF4A2	Q14240	407 aa	Known RBP	13.46	□□□□□ -0.25
SNRPD2-208	ENST00000590212	POLK	Q9UBT6	870 aa		13.46	□□□□□ -0.25
SNRPD2-208	ENST00000590212	ADAMTS7	Q9UKP4	1686 aa		13.46	□□□□□ -0.26
SNRPD2-208	ENST00000590212	DLEC1	Q9Y238	1755 aa		13.45	□□□□□ -0.26
SNRPD2-208	ENST00000590212	TJP1	Q07157	1748 aa		13.45	□□□□□ -0.26
SNRPD2-208	ENST00000590212	POTEC	B2RU33	542 aa		13.45	□□□□□ -0.26
SNRPD2-208	ENST00000590212	ZPR1	O75312	459 aa		13.45	□□□□□ -0.26
SNRPD2-208	ENST00000590212	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.45	□□□□□ -0.26
SNRPD2-208	ENST00000590212	DPY19L2	Q6NUT2	758 aa		13.45	□□□□□ -0.26
SNRPD2-208	ENST00000590212	CREBZF	Q9NS37	354 aa		13.45	□□□□□ -0.26
SNRPD2-208	ENST00000590212	AFDN	P55196	1824 aa	Known RBP	13.45	□□□□□ -0.26
SNRPD2-208	ENST00000590212	USPL1	Q5W0Q7	1092 aa		13.44	□□□□□ -0.26
SNRPD2-208	ENST00000590212	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.44	□□□□□ -0.26
SNRPD2-208	ENST00000590212	INTS5	Q6P9B9	1019 aa	Known RBP	13.44	□□□□□ -0.26

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